Template-based Modeling Results for YCIA_ECOLI


  Submitted Primary Sequence

>Length 132
MSTTHNVPQGDLVLRTLAMPADTNANGDIFGGWLMSQMDIGGAILAKEIAHGRVVTVRVEGMTFLRPVAVGDVVCCYARCVQKGTTSVSINIEVWVKKVASEPIGQRYKATEALFKYVAVDPEGKPRALPVE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
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  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSTTHNVPQGDLVLRTLAMPADTNANGDIFGGWLMSQMDIGGAILAKEIAHGRVVTVRVEGMTFLRPVAVGDVVCCYARCVQKGTTSVSINIEVWVKKVASEPIGQRYKATEALFKYVAVDPEGKPRALPVE
CCCCCCCCCCEEEEEEECCHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEECEECCCCEEEEEEEEEEECCCEEEEEEEEEEEECCCCCCCEEEEEEEEEEEEEEECCCCCEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSTTHNVPQGDLVLRTLAMPADTNANGDIFGGWLMSQMDIGGAILAKEIAHGRVVTVRVEGMTFLRPVAVGDVVCCYARCVQKGTTSVSINIEVWVKKVASEPIGQRYKATEALFKYVAVDPEGKPRALPVE
553333233110101000122101110100000001000100000012003220000102201012102211000020200111310010101010221334321222200200000000144222322235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSTTHNVPQGDLVLRTLAMPADTNANGDIFGGWLMSQMDIGGAILAKEIAHGRVVTVRVEGMTFLRPVAVGDVVCCYARCVQKGTTSVSINIEVWVKKVASEPIGQRYKATEALFKYVAVDPEGKPRALPVE
1MUSTER1yliB0.6521.0003.129threading_1TDKNGRQSKGVLLLRTLAMPSDTNANGDIFGGWIMSQMDMGGAILAKEIAHGRVVTVAVESMNFIKPISVGDVVCCYGQCLKVGRSSIKIKVEVWVKKVASEPIGERYCVTDAVFTFVAVDNNGRSRTIPRE
2SPARKS3d6la0.4050.9554.272threading_2------RDMGEPKLKIVAMPSDTNPAGNIFGGWILSQIDLAGAIAARELSPERVVTISMDKVVFKEPVFIGDIISCYSKVVNVGNTSISVEVEVTAQRVDSQGCTSCINVTSALVTYVSVTRDGKKNPISEE
3PROSPECT23d6lA0.4050.9552.655threading_3------RDMGEPKLKIVAMPSDTNPAGNIFGGWILSQIDLAGAIAARELSPERVVTISMDKVVFKEPVFIGDIISCYSKVVNVGNTSISVEVEVTAQRVDSQGCTSCINVTSALVTYVSVTRDGKKNPISEE
4PPA-I3d6lA0.4050.9554.120threading_4------RDMGEPKLKIVAMPSDTNPAGNIFGGWILSQIDLAGAIAARELSPERVVTISMDKVVFKEPVFIGDIISCYSKVVNVGNTSISVEVEVTAQRVDSQGCTSCINVTSALVTYVSVTRDGKKNPISEE
5HHPRED-l3bjk_A0.6770.9393.148threading_5-------SKGVLLLRTLAMPSDTNANGDIFGGWIMSQMAMGGAILAKEIAHGRVVTVAVESMNFIKPISVGDVVCCYGQCLKVGRSSIKIKVEVWVKKVASEPIGERYCVTDAVFTFVAVDNNGRSRTIPR-
6HHPRED-g3bjk_A0.6800.9473.089threading_6-------SKGVLLLRTLAMPSDTNANGDIFGGWIMSQMAMGGAILAKEIAHGRVVTVAVESMNFIKPISVGDVVCCYGQCLKVGRSSIKIKVEVWVKKVASEPIGERYCVTDAVFTFVAVDNNGRSRTIPRE
7SP31nnga0.6770.9624.223threading_7-----RQSKGVLLLRTLAMPSDTNANGDIFGGWIMSQMDMGGAILAKEIAHGRVVTVAVESMNFIKPISVGDVVCCYGQCLKVGRSSIKIKVEVWVKKVASEPIGERYCVTDAVFTFVAVDNNGRSRTIPRE
8SAM-T991yliB0.6521.0004.758threading_8TDKNGRQSKGVLLLRTLAMPSDTNANGDIFGGWIMSQMDMGGAILAKEIAHGRVVTVAVESMNFIKPISVGDVVCCYGQCLKVGRSSIKIKVEVWVKKVASEPIGERYCVTDAVFTFVAVDNNGRSRTIPRE
9MUSTER3d6lA0.4050.9552.955threading_9------RDMGEPKLKIVAMPSDTNPAGNIFGGWILSQIDLAGAIAARELSPERVVTISMDKVVFKEPVFIGDIISCYSKVVNVGNTSISVEVEVTAQRVDSQGCTSCINVTSALVTYVSVTRDGKKNPISEE
10SPARKS1nnga0.6770.9624.234threading_10-----RQSKGVLLLRTLAMPSDTNANGDIFGGWIMSQMDMGGAILAKEIAHGRVVTVAVESMNFIKPISVGDVVCCYGQCLKVGRSSIKIKVEVWVKKVASEPIGERYCVTDAVFTFVAVDNNGRSRTIPRE

  Predicted Tertiary Structure

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TM-score=0.944 to 1yliB
SCOP code=d.38.1.1
TM-score=0.823 to 2gvhB
SCOP code=d.38.1.1
TM-score=0.825 to 2gvhB
SCOP code=d.38.1.1
TM-score=0.825 to 2gvhB
SCOP code=d.38.1.1
TM-score=0.825 to 2gvhB
SCOP code=d.38.1.1