Template-based Modeling Results for YEED_ECOLI

Submitted Primary Sequence

>Length 75
MVIKKLDVVTQVCPFPLIEAKAALAEMVSGDELVIEFDCTQATEAIPQWAAEEGHAITDYQQIGDAAWSITVQKA
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--------10--------20--------30--------40--------50--------60--------70

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MVIKKLDVVTQVCPFPLIEAKAALAEMVSGDELVIEFDCTQATEAIPQWAAEEGHAITDYQQIGDAAWSITVQKA
CCCEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MVIKKLDVVTQVCPFPLIEAKAALAEMVSGDELVIEFDCTQATEAIPQWAAEEGHAITDYQQIGDAAWSITVQKA
544120102222001000201110241331210000010240020012003423110011221333201010133
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--------10--------20--------30--------40--------50--------60--------70

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MVIKKLDVVTQVCPFPLIEAKAALAEMVSGDELVIEFDCTQATEAIPQWAAEEGHAITDYQQIGDAAWSITVQKA
1	MUSTER	1dcjA	0.216	0.987	3.815	threading_1	MPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIADDPATTRDIPGFCTFMEHELVAKET-DGLPYRYLIRKG
2	SPARKS	1dcja	0.216	0.987	3.459	threading_2	SPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIADDPATTRDIPGFCTFMEHELVAKETDG-LPYRYLIRKG
3	PROSPECT2	1dcja	0.216	0.987	1.487	threading_3	MPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIADDPATTRDIPGFCTFMEHELVAKET-DGLPYRYLIRKG
4	PPA-I	1dcjA	0.203	0.987	5.688	threading_4	SPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIADDPATTRDIPGFCTFMEHELVAKET-DGLPYRYLIRKG
5	HHPRED-l	1jdq_A	0.338	0.987	4.349	threading_5	QVTKTLDVRGEVCPVPDVETKRALQNMKPGEILEVWIDYPMSKERIPETVKKLGHEVLEIEEVGPSEWKIYIKV-
6	HHPRED-g	1jdq_A	0.333	1.000	3.650	threading_6	QVTKTLDVRGEVCPVPDVETKRALQNMKPGEILEVWIDYPMSKERIPETVKKLGHEVLEIEEVGPSEWKIYIKVK
7	SP3	1dcja	0.230	0.987	3.560	threading_7	MPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIADDPATTRDIPGFCTFMEHELVAKETDG-LPYRYLIRKG
8	SAM-T99	1jdqA	0.338	0.987	3.314	threading_8	-VTKTLDVRGEVCPVPDVETKRALQNMKPGEILEVWIDYPMSKERIPETVKKLGHEVLEIEEVGPSEWKIYIKVK
9	MUSTER	1pavA	0.189	0.987	3.698	threading_9	MPDRVIDARGSYCPGPLMELIKAYKQAKVGEVISVYSTDAGTKKDAPAWIQKSGQELVGVFD-RNGYYEIVMKKV
10	SPARKS	1jdqa	0.333	1.000	3.369	threading_10	QVTKTLDVRGEVCPVPDVETKRALQNMKPGEILEVWIDYPMSKERIPETVKKLGHEVLEIEEVGPSEWKIYIKVK

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.932 to 1dcjA SCOP code=d.68.3.3	TM-score=0.924 to 1dcjA SCOP code=d.68.3.3	TM-score=0.936 to 1dcjA SCOP code=d.68.3.3	TM-score=0.927 to 1dcjA SCOP code=d.68.3.3	TM-score=0.934 to 1dcjA SCOP code=d.68.3.3