Template-based Modeling Results for YFDY_ECOLI


  Submitted Primary Sequence

>Length 80
MINLWMFLALCIVCVSGYIGQVLNVVSAVSSFFGMVILAALIYYFTMWLTGGNELVTGIFMFLAPACGLMIRFMVGYGRR
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--------10--------20--------30--------40--------50--------60--------70--------80
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MINLWMFLALCIVCVSGYIGQVLNVVSAVSSFFGMVILAALIYYFTMWLTGGNELVTGIFMFLAPACGLMIRFMVGYGRR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHCEEEEEEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MINLWMFLALCIVCVSGYIGQVLNVVSAVSSFFGMVILAALIYYFTMWLTGGNELVTGIFMFLAPACGLMIRFMVGYGRR
22100100000000000100201200100020000000000010100002202210100000001000000000112357
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--------10--------20--------30--------40--------50--------60--------70--------80
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMINLWMFLALCIVCVSGYIGQVLNVVSAVSSFFGMVILAALIYYFTMWLTGGNELVTGIFMFLAPACGLMIRFMVGYGRR
1SPARKS1wu0a0.1640.8381.048threading_1LGVLAAAIAVGLGALGAGIGNGLIVSRTIEGIAELRPVLQTTMFIGVALVEALPIIGVVFSFIY------------LGR-
2MUSTER3rkoK0.2470.9630.797threading_2MIPLQHGLILAAILFVGLTGLVINLLFMLIGLEIMINASALAFVVA-YWGQTDGQVMYILAISLAAAGLAL--LLQLHRR
3SPARKS1p58d0.1640.6880.869threading_3-------------SSEGAWKHAQRIETWILRHPGFTIMAAILAYTIGTTHFQRVLIFILLTAIAPSMT------------
4PROSPECT23g7dA10.1000.8750.578threading_4GKVSAGSVLDLFLARRAHTRTSAAEAAGVPPADLEAALR----------SPASETGLTVLRTLGRALGFDYRVLLPADDQ
5PPA-I1p49A10.2940.6370.905threading_5GFKRLVFLPLQIVGVTLLTLAALNCLGPLGVFFSLLFLAALILTLFLGFLH-----------------------------
6HHPRED-l2ksd_A0.2220.6750.665threading_6SMLLALALVVLAIVVQMAHGQVESIDVIRSIFFGLLITPWAVYFLSVVVEQLSR--------------------------
7HHPRED-g2qks_A0.2240.8380.615threading_7LSDLFTTL----VDLK--WRWF--FVSLAVLFLLLNTAFATLYMLGSAPIANQFPFGGAFFFSVETL-----ATVGYGDM
8SP31wu0a0.1710.8750.722threading_8LGVLAAAIAVGLGALGAGIGNGLIVSRTIEGIARQPELRP---VLQ-----TTMFIGVALVEALPIIGVVFSFIY-LGR-
9SAM-T992p97A0.1880.8000.773threading_9LITGDLVRAYRAGGLEILPDEKLNKQKVVASVRRLAALAVLVGDGWSVFRDGRDRLKELVATLA----------------
10MUSTER2x2vA0.1820.8250.770threading_10-AFLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQ-LRGTLQTLMFI----GVPLAEAVPIIAIVI-SLLILF-------

  Predicted Tertiary Structure

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TM-score=0.352 to 2qswA
SCOP code=d.58.18.13
TM-score=0.646 to 2g38C
SCOP code=a.25.4.1
TM-score=0.548 to 2qypB
SCOP code=a.64.1.1
TM-score=0.563 to 1z0jB
SCOP code=a.2.19.1
TM-score=0.401 to 1mztA
SCOP code=h.1.4.1