Template-based Modeling Results for YGAV_ECOLI


  Submitted Primary Sequence

>Length 99
MTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGELTRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYCP
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--------10--------20--------30--------40--------50--------60--------70--------80--------90
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGELTRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYCP
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCEEEEEECCHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGELTRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYCP
552122122102200200200111200000010123220000101420312110012001203421002022312100000223002100200242104
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--------10--------20--------30--------40--------50--------60--------70--------80--------90
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGELTRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYCP
1MUSTER3cuoA1.0000.9903.610threading_1MTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGELTRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYC-
2SPARKS3pqja0.2780.9803.419threading_2-MTREDMEKRANEVANLLKTLSHPVRLMLVCTLVEGE-FSVGELEQQIGIGQPTLSQQLGVLRESGIVETRRNIKQIFYRLTEAKAAQLVNALYTIFCA
3PROSPECT23cuoA1.0000.9902.108threading_3MTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGELTRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYC-
4PPA-I3cuoA1.0000.9904.746threading_4MTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGELTRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYC-
5HHPRED-l1r1u_A0.2330.9092.294threading_5-------NDTLERVTEIFKALGDYNRIRIMELLSVSE-ASVGHISHQLNLSQSNVSHQLKLLKSVHLVKAKRQGQSMIYSLDDIHVATMLKQIHHANH-
6HHPRED-g1r1u_A0.2390.9292.334threading_6------NTDTLERVTEIFKALGDYNRIRIMELLSVSE-ASVGHISHQLNLSQSNVSHQLKLLKSVHLVKAKRQGQSMIYSLDDIHVATMLKAIHHANHP
7SP33pqja0.2780.9803.587threading_7-MTREDMEKRANEVANLLKTLSHPVRLMLVCTLVEGE-FSVGELEQQIGIGQPTLSQQLGVLRESGIVETRRNIKQIFYRLTEAKAAQLVNALYTIFCA
8SAM-T993pqjA0.2810.9703.608threading_8-MTREDMEKRANEVANLLKTLSHPVRLMLVCTLV-EGEFSVGELEQQIGIGQPTLSQQLGVLRESGIVETRRNIKQIFYRLTEAKAAQLVNALYTIFC-
9MUSTER3pqjA0.2990.9803.381threading_9MT-REDMEKRANEVANLLKTLSHPVRLMLVCTLVEG-EFSVGELEQQIGIGQPTLSQQLGVLRESGIVETRRNIKQIFYRLTEAKAAQLVNALYTIFCA
10SPARKS3cuoa1.0000.9903.277threading_10MTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGELTRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYC-

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.788 to 1r1uC
TM-score=0.980 to native
SCOP code=a.4.5.5
TM-score=0.788 to 1r1uC
TM-score=0.980 to native
SCOP code=a.4.5.5
TM-score=0.762 to 1r1uC
TM-score=0.879 to native
SCOP code=a.4.5.5
TM-score=0.788 to 1r1uC
TM-score=0.980 to native
SCOP code=a.4.5.5
TM-score=0.788 to 1r1uC
TM-score=0.980 to native
SCOP code=a.4.5.5

  Experimental Structure

Download 3cuoA
SCOP code=a.4.5.5