Template-based Modeling Results for YHBQ_ECOLI


  Submitted Primary Sequence

>Length 100
MTPWFLYLIRTADNKLYTGITTDVERRYQQHQSGKGAKALRGKGELTLVFSAPVGDRSLALRAEYRVKQLTKRQKERLVAEGAGFAELLSSLQTPEIKSD
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTPWFLYLIRTADNKLYTGITTDVERRYQQHQSGKGAKALRGKGELTLVFSAPVGDRSLALRAEYRVKQLTKRQKERLVAEGAGFAELLSSLQTPEIKSD
CCCEEEEEEEECCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MTPWFLYLIRTADNKLYTGITTDVERRYQQHQSGKGAKALRGKGELTLVFSAPVGDRSLALRAEYRVKQLTKRQKERLVAEGAGFAELLSSLQTPEIKSD
4531000002012110000001002200221323311301322121100000202312200301110330233112200321210130022032342444
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMTPWFLYLIRTADNKLYTGITTDVERRYQQHQSGKGAKALRGKGELTLVFSAPVGDRSLALRAEYRVKQLTKRQKERLVAEGAGFAELLSSLQTPEIKSD
1MUSTER1zg2A0.4260.9404.405threading_1MN-HYVYILECKDGSWYTGYTTDVDRRIKKHASGKGAKYTRGRGPFRLVATWAFPSKEEAMRWEYEVKHLSRRKKEQLVSLKGGPYENTTKLSTT-----
2SPARKS1ywla0.2970.9104.003threading_2KKSHYFYVLLCQDGSFYGGYTTEPERRLTEHNSGTGAKYTRKRRPVIMIHTEKFETRSEATKAEAAFKKLTRKQKEQYLKTFHLEHHHHHH---------
3PROSPECT21zg2A0.4150.9401.972threading_3MN-HYVYILECKDGSWYTGYTTDVDRRIKKHASGKGAKYTRGRGPFRLVATWAFPSKEEAMRWEYEVKHLSRRKKEQLVSLKGGPYEN-----TTKLSTT
4PPA-I1zg2A0.4150.9409.873threading_4-MNHYVYILECKDGSWYTGYTTDVDRRIKKHASGKGAKYTRGRGPFRLVATWAFPSKEEAMRWEYEVKHLSRRKKEQLVSLKGGPYENTTKLSTT-----
5HHPRED-l1zg2_A0.4260.9406.926threading_5MN-HYVYILECKDGSWYTGYTTDVDRRIKKHASGKGAKYTRGRGPFRLVATWAFPSKEEAMRWEYEVKHLSRRKKEQLVSLKGGPYENTTKLSTT-----
6HHPRED-g1zg2_A0.4260.9405.842threading_6M-NHYVYILECKDGSWYTGYTTDVDRRIKKHASGKGAKYTRGRGPFRLVATWAFPSKEEAMRWEYEVKHLSRRKKEQLVSLKGGPYENTTKLSTT-----
7SP31ywla0.3080.9103.778threading_7MKSHYFYVLLCQDGSFYGGYTTEPERRLTEHNSGTGAKYTRKRRPVIMIHTEKFETRSEATKAEAAFKKLTRKQKEQYLKTFHLEHHHHHH---------
8SAM-T991zg2A0.4430.7905.300threading_8-MNHYVYILECKDGSWYTGYTTDVDRRIKKHASGKGAKYTRGRGPFRLVATWAFPSKEEAMRWEYEVKHLSRRKKEQLVS--------------------
9MUSTER1ywlA0.3100.8703.683threading_9KKSHYFYVLLCQDGSFYGGYTTEPERRLTEHNSGTGAKYTRLARPVIMIHTEKFETRSEATKAEAAFKKLTRKQKEQYLKTFHL-------------HHH
10SPARKS1ln0a0.1600.8100.771threading_10--KSGIYQIKNTNNKVYVGSAKDFEKAWKRHFKDLEKGCHSSINVFECSILEEIPY-----------------EKDLIIERENFWIKELNSKINGYNIAD

  Predicted Tertiary Structure

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TM-score=0.417 to 2k7iA
SCOP code=d.348.1.1
TM-score=0.409 to 2k7iA
SCOP code=d.348.1.1
TM-score=0.476 to 1mk0A
SCOP code=d.226.1.1
TM-score=0.410 to 1wn9A
SCOP code=d.319.1.1
TM-score=0.415 to 2k7iA
SCOP code=d.348.1.1