Template-based Modeling Results for ABGA_ECOLI

Submitted Primary Sequence

>Length 436
MESLNQFVNSLAPKLSHWRRDFHHYAESGWVEFRTATLVAEELHQLGYSLALGREVVNESSRMGLPDEFTLQREFERARQQGALAQWIAAFEGGFTGIVATLDTGRPGPVMAFRVDMDALDLSEEQDVSHRPYRDGFASCNAGMMHACGHDGHTAIGLGLAHTLKQFESGLHGVIKLIFQPAEEGTRGARAMVDAGVVDDVDYFTAVHIGTGVPAGTVVCGSDNFMATTKFDAHFTGTAAHAGAKPEDGHNALLAAAQATLALHAIAPHSEGASRVNVGVMQAGSGRNVVPASALLKVETRGASDVINQYVFDRAQQAIQGAATMYGVGVETRLMGAATASSPSPQWVAWLQSQAAQVAGVNQAIERVEAPAGSEDATLMMARVQQHQGQASYVVFGTQLAAGHHNEKFDFDEQVLAIAVETLARTALNFPWTRGI
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MESLNQFVNSLAPKLSHWRRDFHHYAESGWVEFRTATLVAEELHQLGYSLALGREVVNESSRMGLPDEFTLQREFERARQQGALAQWIAAFEGGFTGIVATLDTGRPGPVMAFRVDMDALDLSEEQDVSHRPYRDGFASCNAGMMHACGHDGHTAIGLGLAHTLKQFESGLHGVIKLIFQPAEEGTRGARAMVDAGVVDDVDYFTAVHIGTGVPAGTVVCGSDNFMATTKFDAHFTGTAAHAGAKPEDGHNALLAAAQATLALHAIAPHSEGASRVNVGVMQAGSGRNVVPASALLKVETRGASDVINQYVFDRAQQAIQGAATMYGVGVETRLMGAATASSPSPQWVAWLQSQAAQVAGVNQAIERVEAPAGSEDATLMMARVQQHQGQASYVVFGTQLAAGHHNEKFDFDEQVLAIAVETLARTALNFPWTRGI
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MESLNQFVNSLAPKLSHWRRDFHHYAESGWVEFRTATLVAEELHQLGYSLALGREVVNESSRMGLPDEFTLQREFERARQQGALAQWIAAFEGGFTGIVATLDTGRPGPVMAFRVDMDALDLSEEQDVSHRPYRDGFASCNAGMMHACGHDGHTAIGLGLAHTLKQFESGLHGVIKLIFQPAEEGTRGARAMVDAGVVDDVDYFTAVHIGTGVPAGTVVCGSDNFMATTKFDAHFTGTAAHAGAKPEDGHNALLAAAQATLALHAIAPHSEGASRVNVGVMQAGSGRNVVPASALLKVETRGASDVINQYVFDRAQQAIQGAATMYGVGVETRLMGAATASSPSPQWVAWLQSQAAQVAGVNQAIERVEAPAGSEDATLMMARVQQHQGQASYVVFGTQLAAGHHNEKFDFDEQVLAIAVETLARTALNFPWTRGI
4430231032003200200210250021111211002100200340201001123123322322222321122112202231122322221321100000002224312000010001002022333122322331110112000000000000000000020033113204010100010122115002100320003301000000001202001000123200000201020101010100112301000000010010011011123010000000020120311001201010101012320031012102200200031120201020112010011033001001200130122330122121211010001002103323020000000031100000130100130010002000200111123334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MESLNQFVNSLAPKLSHWRRDFHHYAESGWVEFRTATLVAEELHQLGYSLALGREVVNESSRMGLPDEFTLQREFERARQQGALAQWIAAFEGGFTGIVATLDTGRPGPVMAFRVDMDALDLSEEQDVSHRPYRDGFASCNAGMMHACGHDGHTAIGLGLAHTLKQFESGLHGVIKLIFQPAEEGTRGARAMVDAGVVDDVDYFTAVHIGTGVPAGTVVCGSDNFMATTKFDAHFTGTAAHAGAKPEDGHNALLAAAQATLALHAIAPHSEGASRVNVGVMQAGSGRNVVPASALLKVETRGASDVINQYVFDRAQQAIQGAATMYGVGVETRLMGAATASSPSPQWVAWLQSQAAQVAGVNQAIERVEAPAGSEDATLMMARVQQHQGQASYVVFGTQLAAGHHNEKFDFDEQVLAIAVETLARTALNFPWTRGI
1	MUSTER	2q43A	0.262	0.830	3.048	threading_1	LLEFAKS-PEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPV---------------------------------------AITGVIGYIGTGEP-PFVALRADMDALPIQEGVEWEHK-------SKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLAGAVFEAVITGKT----------IDPVVAASSIVLSLQQLVSRETDPKVVTVSKVN--------PDSITIGGTLRAFTG--FTQLQQRVKEVITKQAAVHRCNASVNLTEPMPPTVNNKDLYKQFKKVVRDLLGQEAFVE-AAPVMGSEDFSYFAE-----TIPGHFSLLGMQDYASSHSPLYRINEDVLPYGAAIHASMAVQYLKEKAS
2	SPARKS	1xmba	0.249	0.828	6.178	threading_2	--KLLEFAPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTG----------------------------------------EPPFVALRADMDALPIQEGVEWEHKS-------KIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLGAGVFEAVITGKT----------IDPVVAASSIVLSLQQLVSRETDPKVVTVSKVN--------PDSITIGGTLRAFTG--FTQLQQRVKEVITKQAAVHRCNASVNLREPMPPTVNNKDLYKQFKKVVRDLLGQEA-FVEAAPVMGSEDFSYFAETI-----PGHFSLLGMQDEASSHSPLYRINEDVLPYGAAIHASMAVQYLKEKAS
3	PROSPECT2	3io1A	0.576	0.865	4.487	threading_3	LQ--LDEYLRQLAPSTQWRRDFHLHAESGWLEFRTASKVADILDGLGYQLALGRDVIDADSRGLPDEETLARAFE---------------------------------RAREQGAPERWLPAFEGGFAGTGRPGPTLAFRVDDALDLCGHDGHTAIGLGLAHVLKQYAAQLNGVIKLIFQPAEEGTRGAR-AVAAGVVDDVDYFTAIHIGTGVPAGTVV--CGGDNFTTKFDVQFSGVAAHAGGKPEDGRNALLAAAQAALGLHAIPPHSAGASRVNVG-VQAGTGRNVVPSSALLKVETRGESEAINQYVFERAQHVVAGAA---AYEARYELRGAATASAPSPAWVDYLREQAARVPGVQQAVDRIAAPAGSEDATLARVQA-----RGGLASYIFGTE----------LDESVAVAVETLARVALNFPWQR--
4	PPA-I	3io1A	0.650	0.878	5.921	threading_4	LQ--LDEYLRQLAPSTQWRRDFHLHAESGWLEFRTASKVADILDGLGYQLALGRDVIDADSR-GLPDEETLARAFERAREQGAPERWLPAFEGGFAGVVATLDTGRPG--------------------------PTLAFRVDDALDLCGHDGHTAIGLGLAHVLKQYAAQLNGVIKLIFQPAEEGTRGAR-AVAAGVVDDVDYFTAIHIGTGVPAGTVV--CGGDNATTKFDVQFSGVAAHAGGKPEDGRNALLAAAQAALGLHAIPPHSAGASRVNVGVQ-AGTGRNVVPSSALLKVETRGESEAINQYVFERAQHVVAGAAAY---EARYELRGAATASAPSPAWVDYLREQAARVPGVQQAVDRIAAPAGSEDATLARVQAR-----GGLASYIFGTE----------LDESVAVAVETLARVALNFPWQR--
5	HHPRED-l	1ysj_A	0.280	0.803	3.321	threading_5	-------AKAFHTRLIN-RRDLHEHPELSFQEVETTKKIRRWLEEEQIEILD--------------------------------------VPQLKTGVIAEIKGREDGPVIAIRADIDALPIQE---QTNLPFASKV-D---GT-HACGHDFHTASIIGTA-LLNQRRAELKGTVRFIFQPAEEIAAGARKVLEAGVLNGVSAIFG-HNKPDLPVGTIGVKEGPL-ASVDRFEIVIKGK--------NSIDPIAAAGQIISGLQ--------NAVVSITRVQAGTSWNVIPDQAE-EGTVRTFQKEARQAVPEH-RRVAEGIAAGYGAQAEFKWFPYLPSVQNDGTFLNAASEAAARL-GYQTV--HAEQSPGGEDFALYQEK-----IPGFFVW-GTNGTEEWHHPAFTLDEEALTVASQYFAELAVIVLETI--
6	HHPRED-g	1xmb_A	0.260	0.828	5.015	threading_6	--KLLAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYP---------------------------------------VAITGVIGYIGTGE-PPFVALRADMDALPIQEGVEWE-------HKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLAGAVFEAVITGK----------TIDPVVAASSIVLSLQQLVSRETDPKVVTVSKVN--------PDSITIGGTLRAFTGFT--QLQQRVKEVITKQAAVHRCNASVNLTEPMPPTVNNKDLYKQFKKVVRDLLGQEAFVE-AAPVMGSEDFSYFAETI-----PGHFSLLGMQDYASSHSPLYRINEDVLPYGAAIHASMAVQYLKEKAS
7	SP3	1xmba	0.255	0.835	6.273	threading_7	--KLLEFAPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPV---------------------------------------AITGVIGYIGTG-EPPFVALRADMDALPIQEGVEWE-------HKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLGAGVFEAVITGKT----------IDPVVAASSIVLSLQQLVSRETDPLDSKVVTVS-----KVNPDSITIGGTLRAFTG--FTQLQQRVKEVITKQAAVHRCNASVNLREPMPPTVNNKDLYKQFKKVVRDLLGQEA-FVEAAPVMGSEDFSYFAETI-----PGHFSLLGMQDYASSHSPLYRINEDVLPYGAAIHASMAVQYLKEKAS
8	SAM-T99	2q43A	0.251	0.842	6.221	threading_8	KLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYP---------------------------------------VAITGVIGYIGTGE-PPFVALRADMDALPIQEGVEWE-------HKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLAGGVFEAVITGK----------TIDPVVAASSIVLSLQQLVSRETDPLVVTVSKVN--------PDSITIGGTLRAFTG--FTQLQQRVKEVITKQAAVHRCNASVNLREPMPPTVNNKDLYKQFKKVVRDLLGQEAFV-EAAPVMGSEDFSYFAETIPGHFSLLGM-QDETNGYASSHSPLYRINEDVLPYGAAIHASMAVQYLKEKAS
9	MUSTER	3io1A	0.668	0.876	2.984	threading_9	LQ-LDEYLRQLAP-STQWRRDFHLHAESGWLEFRTASKVADILDGLGYQLALGRDVIDADSR-GLPDEETLARAFERAREQGAPERWLPAFEGGFAGVVATLDTGRPGP--------------------------TLAFRVDDALDLCGHDGHTAIGLGLAHVLKQYAAQLNGVIKLIFQPAEEGTRGAR-AVAAGVVDDVDYFTAIHIGTGVPAGTVVC--GGDNATTKFDVQFSGVAAHAGGKPEDGRNALLAAAQAALGLHAIPPHSAGASRVNVGV--AGTGRNVVPSSALLKVETRGESEAINQYVFERAQHVVAGAAAY---EARYELRGAATASAPSPAWVDYLREQAARVPGVQQAVDRIAAPAGSEDATLARVQAR-----GGLASYIFGTE----------LDESVAVAVETLARVALNFPWQR--
10	SPARKS	1ysja	0.265	0.805	5.564	threading_10	-------ADKAFHTRLINRRDLHEHPELSFQEVETTKKIRRWLEEEQIEI--------------------------------------LDVPQLKTGVIAEIKGREDGPVIAIRADIDALPIQEQTNLPFASKVDG--------THACGHDFHTASIIGTALLNQ-RRAELKGTVRFIFQPAEEIAAGARKVLEAGVLNGVSAIFG-HNKPDLPVGTIGVKEGPLASVDRFEIVIKGKNSI---------DPIAAAGQIISGLQN--------AVVSITRVQAGTSWNVIPDQ-AEEGTVRTFQKEARQAVPEH-RRVAEGIAAGYGAQAEFKWFPYLPSVQNDGTFLNAASEAAAR-LGYQ--TVHAEQSPGGEDFALYQEKIP-----GFFVWGTNGT-EEWHHPAFTLDEEALTVASQYFAELAVIVLETI--

Predicted Tertiary Structure


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TM-score=0.828 to 2q43A SCOP code=c.56.5.4	TM-score=0.833 to 2q43A SCOP code=c.56.5.4	TM-score=0.877 to 2q43A SCOP code=c.56.5.4	TM-score=0.647 to 2q43A SCOP code=c.56.5.4	TM-score=0.667 to 2q43A SCOP code=c.56.5.4