Template-based Modeling Results for ABRB_ECOLI


  Submitted Primary Sequence

>Length 348
MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA
351110000000000000001002000000000000000010121203003101200000000001130102102201310120000000000000000100130121101000001011000000000232223121000010010000000000002101123131123212211210000000000000000001103011010000000000020021120300310100000000010001023300220231012001000010000000010003112020000000001100000000001030110000001001000000000000200122133434
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA
1MUSTER3zuxA0.1530.8621.225threading_1----------------NILSKISSIGKTFSLWAALFAAAAFFAPDTFKWAGPYIPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLPVGVILVGCCPGGTASNVMTYLA-RGNVALSVAVTSVSTLTSPLLTPAIFLMLAGEMLEIQAAGM------LMSIVKMVLLPIVLGLIVHKV-LGS---------KTEKLT---------DALPLVSVAAIVLIIGAVV-GASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKALTIEVGSGLAAALAAAHFAAAPVVAVPGALFSVWHNISGSLLATYWAAKA-----
2SPARKS3zuxa0.1540.8591.261threading_2----------------NILSKISSFIGKTFSLWAALFAAAAFAPDTFKWAGPYIPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLPVGVILVGCCPGG-TASNVMTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLAGEMLEIQ----------AAGMLMSIVKM----------------VLLPIVLGLIVHKVGSKTEKLTDALPLVSVAAIVLIIGAVV-GASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKALTIEVGSGLAAALAAAHFAAAPVVAVPGALFSVWHNISGSLLATYWAAKA-----
3PROSPECT21jdha0.1150.9971.806threading_3KKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLLVQNCLWTLRNLSDAATKQEGMEGLLGSDDINVVTCAAGILSGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEPSHWPLIKATVGLIRNLALCPANHAPLREAIPRLVQLLVRAHQMEEIVEGCTGALHILARDVHNRIVIRGL-NTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAPLTELLHSRNS
4PPA-I3zuxA0.1500.8651.778threading_4-------------NILSKISSFI--GKTFSLWAALFAAAAFFAPDTFKWAGPYIPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLPVGVILVGCCPGGTASNVMTYLA-RGNVALSVAVTSVSTLTSPLLTPAIFLMLAGEM----------------------LEIQAAGMLMSIV----KMVLLPIVLGLIVHKVLGSKTEKLTDALPLVSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKALTIEVGSGLAAALAAAHFAAAPVVAVPGALFSVWHNISGSLLATYWAAKA-----
5HHPRED-l3zux_A0.1490.8482.192threading_5----------------NILSKISSFIGKTFSLWAALFAAAAFAPDTFKWAGPYIPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLPAEIILVGCCPGGTASNV-MTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLAGEM------LEIQAAGMLMSIVKMVLLPIVLGLIVHKV-LGSK--------------TE--KLTDAPLVSVAAVLIIGAVVGAS--KGKI---MESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKIGMQNSGLAA--ALAAAFAAAPV-VAVPGALFSVWHNISGSLLATYWAAKA-----
6HHPRED-g3zux_A0.1490.8483.604threading_6----------------NILSKISSFIGKTFSLWAALFAAAAFAPDTFKWAGPYIPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLPAEIILVGCCPGGTASNV-MTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLAGEM----------LEIQAAGMLMSIVK----------------MVLLPIVLGLIVHKVLGSKLTDA--LPLVSVAAIVLIIGAVVGAS-KGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKIGMQNSGLA--AALAAAHFAAAPVVAVPGALFSVWHNISGSLLATYWAAKA-----
7SP33zuxa0.1570.8621.163threading_7---------NILSKISSFIGKTF---SLWAALFAAAAFFAPDTFKWA---GPYIPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLPVGVILVGCCPGGTASNVMTYL-ARGNVALSVAVTSVSTLTSPLLTPAIFLMLAG----------EMLEIQAAGMLMSIVKM----------------VLLPIVLGLIVHKVGSKTEKLTDALPLVSVAAIVLIIGAVV-GASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKALTIEVGSGLAAALAAAHFAAAPVVAVPGALFSVWHNISGSLLATYWAAKA-----
8SAM-T991wyzB0.1450.5140.787threading_8----------------------------------LLPVTLGDTPLEQVLPSYNTEIIRGI----------RHFIVEDVRSARRFLKKVDREIDIDSLTFYPLNKHTSPEDISGYLKPLAGGASGVI--SEDPGADVVAIAQRQKLKVIPLVGPSSIILSVASGFN-GQSFAKIEDILQNCRPQTKLCIAANITCE------------------------------------------------GEFIQTRTVKDWKGHIPELSKIPCIFLLYKL--------------------------------------------------------------------------
9MUSTER3hfwA0.1230.9370.875threading_9--MEKYVAAMVLSAAGDALGYY-NGKWEFLDGEKIHRQLAQLGGLALDVGRDDTVMHLATAEALVEAGKAPK-LTQLYYLLAKHYQDCMEDMGASVHNAMQLKPGKPNGWRIPF-EGGCGAAMRAMCIGLRFPHHSQLDTLIQVSIESGRMPTGYLGALASALFTAYAVNSRPPLQWGKGLMELLPEAKKYIVQSGYFVEENLQHWSYFQTKWENYLKLRGILDGESAPTFP-------------SFGVKERDQFYTSLSY-SGWGGSSGHDAPMIAYDAVLAAGDSWKELAHRAFGGDSDSTAAIAGCW---WGVMYGFKLEYRNRLEETARALYSLGSKEDTVISL
10SPARKS1kpla0.1380.9171.101threading_10AFLLWPLAFILSALLAMVGYFLVRKFAPEAGGSGIPEIEGALEELRPVRWWRVLPVKFIGGMGTLGAGMV--------------LGREGPTVQIGGNLGRMVLDVFRMRSAEARHTLL--ATGAAAGLSAAFNAPLAGILFIIIKAVFTGVIMSSIVFRIFNGEAPIIEVGKLSDAPVLWLYLILGIIFGVVGPVFNSLVLHGGEIKKWVLMGGAIGGLCGILGLIEPLFIFITRVVTTLLCFSSGAPGGI-------FAPMLALGTLLGTAFGMAAAVLFPQYHLEAGTFAIAGM------GALMAASVRALTGIVLVLEMYQLILPMIITCLGATLLAQFLGGKPL

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.409 to 2q7nB
SCOP code=a.26.1.1
TM-score=0.406 to 1kd9A
SCOP code=h.1.3.1
TM-score=0.414 to 2q7nB
SCOP code=a.26.1.1
TM-score=0.629 to 1wa5B
SCOP code=a.118.1.1
TM-score=0.411 to 2q7nB
SCOP code=a.26.1.1