Template-based Modeling Results for ALLR_ECOLI

Submitted Primary Sequence

>Length 271
MTEVRRRGRPGQAEPVAQKGAQALERGIAILQYLEKSGGSSSVSDISLNLDLPLSTTFRLLKVLQAADFVYQDSQLGWWHIGLGVFNVGAAYIHNRDVLSVAGPFMRRLMLLSGETVNVAIRNGNEAVLIGQLECKSMVRMCAPLGSRLPLHASGAGKALLYPLAEEELMSIILQTGLQQFTPTTLVDMPTLLKDLEQARELGYTVDKEEHVVGLNCIASAIYDDVGSVVAAISISGPSSRLTEDRFVSQGELVRDTARDISTALGLKAHP
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTEVRRRGRPGQAEPVAQKGAQALERGIAILQYLEKSGGSSSVSDISLNLDLPLSTTFRLLKVLQAADFVYQDSQLGWWHIGLGVFNVGAAYIHNRDVLSVAGPFMRRLMLLSGETVNVAIRNGNEAVLIGQLECKSMVRMCAPLGSRLPLHASGAGKALLYPLAEEELMSIILQTGLQQFTPTTLVDMPTLLKDLEQARELGYTVDKEEHVVGLNCIASAIYDDVGSVVAAISISGPSSRLTEDRFVSQGELVRDTARDISTALGLKAHP
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEEEEECCEEEEEEEECCCCCEEEECCCCCEECCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCCCCCEEEEEEEECCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTEVRRRGRPGQAEPVAQKGAQALERGIAILQYLEKSGGSSSVSDISLNLDLPLSTTFRLLKVLQAADFVYQDSQLGWWHIGLGVFNVGAAYIHNRDVLSVAGPFMRRLMLLSGETVNVAIRNGNEAVLIGQLECKSMVRMCAPLGSRLPLHASGAGKALLYPLAEEELMSIILQTGLQQFTPTTLVDMPTLLKDLEQARELGYTVDKEEHVVGLNCIASAIYDDVGSVVAAISISGPSSRLTEDRFVSQGELVRDTARDISTALGLKAHP
5532344232232332234203002200100200242222010110032031210001200200231200221332120000000010010013223011000200330033022000000122210000010314220100031001010000000100002123310120043221331022222113101300220143000012321221000000000132110000000000122123310220031022003100321223224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTEVRRRGRPGQAEPVAQKGAQALERGIAILQYLEKSGGSSSVSDISLNLDLPLSTTFRLLKVLQAADFVYQDSQLGWWHIGLGVFNVGAAYIHNRDVLSVAGPFMRRLMLLSGETVNVAIRNGNEAVLIGQLECKSMVRMCAPLGSRLPLHASGAGKALLYPLAEEELMSIILQTGLQQFTPTTLVDMPTLLKDLEQARELGYTVDKEEHVVGLNCIASAIYDDVGSVVAAISISGPSSRLTEDRFVSQGELVRDTARDISTALGLKAHP
1	MUSTER	1mkmB	0.279	0.911	3.428	threading_1	-------------------HMNTLKKAFEILDFIVKNPGDVSVSEIAEKFNMSVSNAYKYMVVLEEKGFVLRKKD-KRYVPGYKLIEYGSFVLRRFNIRDIAHDHLVDIMKRTGETVHLILKDGFEGVYIDKVEGEQSIPMVSRLGMKVDLYSTASGKSILAFVPEKELKEYLKIVELKPKTPNTITNPRVLKRELEKIRKRGYAVDNEENEIGIMCVGVPIFDHNGYPVAGVSISGVARKFTEEKIEEYSDVLKEKAEEISRKLGY----
2	SPARKS	3mq0a	0.280	0.897	5.321	threading_2	--------------SQISDTVPALRRAVRILDLVAGSPRDLTAAELTRFLDLP--SAHGLLAVMTELDLLARSAD-GTLRIGPHSLRWANGFLSHLDIVSTFNDHLAQRHDLDPYTVTLTVREGGEVVYIGCRNHT------FRIGMRLPAPFTATGKILLSDLGPGELRMLFSQ-FPQPLTSRSVAGLSQLEEELALTRARGYSIDDGQIREGMLCIGAAIRDYSGAASAGIAISLIRSEASDEKIAYLGEELRTTANALSEKLGY----
3	PROSPECT2	3mq0A	0.280	0.897	4.451	threading_3	--------------SQISDTVPALRRAVRILDLVAGSPRDLTAAELTRFLDLP--SAHGLLAVMTELDLLARSAD-GTLRIGPHSLRWANGFLSHLDIVSTFNDHLAQRHDLDPYTVTLTVREGGEVVYIGCRNHT------FRIGMRLPAPFTATGKILLSDLGPGELRMLFSQ-FPQPLTSRSVAGLSQLEEELALTRARGYSIDDGQIREGMLCIGAAIRDYSGAASAGIAISLIRSEASDEKIAYLGEELRTTANALSEKLGY----
4	PPA-I	1mkmB	0.279	0.911	5.731	threading_4	-------------------HMNTLKKAFEILDFIVKNPGDVSVSEIAEKFNMSVSNAYKYMVVLEEKGFVLRKKD-KRYVPGYKLIEYGSFVLRRFNIRDIAHDHLVDIMKRTGETVHLILKDGFEGVYIDKVEGEQSIPMVSRLGMKVDLYSTASGKSILAFVPEKELKEYLKIVELKPKTPNTITNPRVLKRELEKIRKRGYAVDNEENEIGIMCVGVPIFDHNGYPVAGVSISGVARKFTEEKIEEYSDVLKEKAEEISRKLGY----
5	HHPRED-l	1mkm_A	0.280	0.908	3.979	threading_5	--------------------MNTLKKAFEILDFIVKNPGDVSVSEIAEKFNMSVSNAYKYMVVLEEKGFVLRKKD-KRYVPGYKLIEYGSFVLRRFNIRDIAHDHLVDIMKRTGETVHLILKDGFEGVYIDKVEGEQSIPMVSRLGMKVDLYSTASGKSILAFVPEKELKEYLKIVELKPKTPNTITNPRVLKRELEKIRKRGYAVDNEENEIGIMCVGVPIFDHNGYPVAGVSISGVARKFTEEKIEEYSDVLKEKAEEISRKLGY----
6	HHPRED-g	2g7u_A	0.228	0.908	3.686	threading_6	---------------D-RDYIQSIERGFAVLLAFDAQRPNPTLAELATEAGLSRPAVRRILLTLQKLGYVAGS--GGRWSLTPRVLSIGQHYSESHALIEAA-PRLLEVAEKTQESASLGVLDGADVVYAARVPVRRI-SINVSVGTRVPAYATS-GRALLAWAPADVVERVVAESTFQKLGPETIGTAAELERELAKVREQGFALTSEELEKGLISLAAPVHDAGGTVVGVVACSTSSARNTPAQFEQAVPCVLAAAAALSAD-GFA---
7	SP3	3mq0a	0.280	0.897	5.525	threading_7	--------------SQISDTVPALRRAVRILDLVAGSPRDLTAAELTRFLDLP--SAHGLLAVMTELDLLARSAD-GTLRIGPHSLRWANGFLSHLDIVSTFNDHLAQRHDLDPYTVTLTVREGGEVVYIGCRNHT------FRIGMRLPAPFTATGKILLSDLGPGELRMLFSQF-PQPLTSRSVAGLSQLEEELALTRARGYSIDDGQIREGMLCIGAAIRDYSGAASAGIAISLIRSEASDEKIAYLGEELRTTANALSEKLGY----
8	SAM-T99	1mkmB	0.279	0.911	5.134	threading_8	-------------------HMNTLKKAFEILDFIVKNPGDVSVSEIAEKFNMSVSNAYKYMVVLEEKGFVLRK-KDKRYVPGYKLIEYGSFVLRRFNIRDIAHDHLVDIMKRTGETVHLILKDGFEGVYIDKVEGEQSIPMVSRLGMKVDLYSTASGKSILAFVPEKELKEYLKIVELKPKTPNTITNPRVLKRELEKIRKRGYAVDNEENEIGIMCVGVPIFDHNGYPVAGVSISGVARKFTEEKIEEYSDVLKEKAEEISRKLGY----
9	MUSTER	3mq0A	0.280	0.897	3.199	threading_9	--------------SQISDTVPALRRAVRILDLVAGSPRDLTAAELTRFLDLP--SAHGLLAVMTELDLLARSAD-GTLRIGPHSLRWANGFLSHLDIVSTFNDHLAQRHDLDPYTVTLTVREGGEVVYIGCRNHT------FRIGMRLPAPFTATGKILLSDLGPGELRMLFSQF-PQPLTSRSVAGLSQLEEELALTRARGYSIDDGQIREGMLCIGAAIRDYSGAASAGIAISLIRSEASDEKIAYLGEELRTTANALSEKLGY----
10	SPARKS	3r4ka	0.196	0.904	5.153	threading_10	---------------------GTVSKALTLLTYFNHGRLEIGLSDLTRLSG-NKATVYR-LSELQEAGFVEQVEGARSYRLGPQVLRLAALREASVPILSASRRVLRELSEDTGETTHLSLLQGEQLASLSHAYSSRNATK-VEDAEVLTFHGTASGLAVLAYSEPSFVDAVLAA-PLTARTPQTQTDPAAIRAEIAEVRRTGLAQSIGGFEAEVHSHAVPIFGPDRAVLGALAVAAPTSR-TPDQKRTIPPALRAAGLSLTERIGGACPP

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.859 to 1mkmB TM-score=0.907 to native SCOP code=a.4.5.33	TM-score=0.822 to 1mkmB TM-score=0.904 to native SCOP code=a.4.5.33	TM-score=0.720 to 1mkmB TM-score=0.857 to native SCOP code=a.4.5.33	TM-score=0.720 to 1mkmB TM-score=0.857 to native SCOP code=a.4.5.33	TM-score=0.859 to 1mkmB TM-score=0.907 to native SCOP code=a.4.5.33

Experimental Structure

Download 1tf1A

SCOP code=d.110.2.2