Template-based Modeling Results for APPC_ECOLI


  Submitted Primary Sequence

>Length 514
MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCEEEECCCCEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCCCCEEEEECCCCCCCCEEEEEECCCCHHHHHCCCCCCEECCCCCCCHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG
5312100000100000000000000000000000000000012222102100200010000000000000000101111100100300010000000010000000100000000000320120000000000000000000000001011200100100132110100000200111101010000000000000000000000100323233101200000000000000000010110121012212220010100022332201000000023433210010201100000011112120210330223122302302101101121232332230021021011011101101310232231112102211321223001000000000000000000000000111223133231001000000000100100010012112110002110001001121220200000000000000000010100020032012213233223345
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG
1PROSPECT21qsaa0.0750.9552.027threading_1DSLDEQRSRYAQIKQAWYRQITDDLMPPARTLQSRFVNELARRED--WRGLLAFSAQCNYYYAKWNAWQGAKELWLTGKSQPNACDKLFSVWRAPLAYLERIRLAMKAGNTGLVTVLAGQMPADYQTIASAIISLANNPNTVLTFARTTGATDFT-------------RQMAAVAFDAENARLMIPSLAQAQEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAILIERRVRMALGTGDRRGLNTWLAREKDEWRYWQADLLLERGR--------EAEAKEILHQLMQQRGFYPMVAAQRIGEEYELKIDKAPQNVDSALTQGPEMARVRELMYWNLDNTARSEWANLVKTEQAQLARYAFNNQWWDLSVQATIAGEERFPLAYNDLFKRYTSGKEIPQSYAMAIARQEHTVKMFSIPGYSSPGQLLDPETNINIGTSYLQYVYQQFGNNRIFSSAAYWLGNSAGRIDAVAFVESIPFSETRGYVKNVLAYDAYYRYFMGDKPTLMSATEWGRRY
2PPA-I3dh4A0.0990.8661.214threading_2AEQFIGMSGSGYSIGLAIASYEWMSAITLIIVGKYFLPIFIEKGIKTILAVFWISLYIFVNLTSVLYLGGLALETILGIPLILGLALFALVYSIVVWTDVIQVFFLVLGGFMTTYMAVSFIGGTDGWFAGVSKMVDAAPGHFE-------------MILDQSNPQYMNLPGIAVLIGGLWVANLYYWGFNQYIIQRTLAA----------KSVSEAQKGIVFAAFLKLIVPFLVVLPGIAAYVITSDPQ-LMASLGDIAATNLPSAAN--------------------ADKAYPWLTQFLPVGVKGVIVSSLASMLNSTATIFTMDIYKEYISPDSGKLVNVGRTAAVVALIIACLIAPMLGGIGQAFQYIQEYTGLVSPGILAVFLLGLFWTTSKGAIIGVVASIPFALFLK-FMPLSMPFMDQMLYTLLFTMVVIAFTSLSTSINDDDPKGISVTSSMFVTDRSFNIAAYGIMIVLAVLYTLFWVLYK------------------------
3PROSPECT21jdha0.0950.8852.013threading_3AVVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLREGLLAIFKSGGIPALVKMGSPVDSVLFYAITTLHNLLLHEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQAYGNQESKLIILASGGPQA-----------------LVNIMRTYTYEKLLWTTSRVLKVNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDQEGMEGLLGTLVQLLGSDDINVVTC----------AAGILSNLTCNNYKNKMMVCQVGGIEALV-------------RTVLRAGDREDITEPAICALRHLTSRHQEAE--MAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALC----PANHAPLREQGAIPRLVQLLVRAHQDTQFVEGVRMEEIVEGCTGALHILAVHNRIVIRGLN-------TIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIPLTELLHSRNEGVA------TYS
4PROSPECT21qgra0.0880.9921.965threading_4MIDANARREVQCVAGIACAEIPVNKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEAAALQNLVKIMMGPALFAITIEAMKSDIDEVALQGIFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTDDWNPCKAAGVCLMLLATCCYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLITAAWTVGRICELLPEAAINDVYLAPLLQCLIEGLSAEPRVASNAADVADDQEEPATYCLSSSFELITTDRPDGHQNNLRSVKNSAKDCYPAVQKTTLVIMERHIQSTSDRIQFNDLQSLLCATLQNVLRKVQHQDALQISDVVMASLLRMFSGQEDALMAVSTLVEVLGGEFLKYMEAFKPFLGIGLYAEYQVCLAAVGLVIIPFCDEVMQLLLENLGNENVVLNTLQQASQAQVDKSDYDMVDYLNELRESCLEA----YTGIVQGLKGDQENVHGDEDHTNQA
5PROSPECT21b3ua0.1070.9261.962threading_5DDSLYPIAVLQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYEVLLALAEQLGTFTTLVGGPEYVHCLLPPLESLATVTVVRDKAVESLRAIS--HEHSPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCSAVKAELRQYFRNLCSDDT------PMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAVADKFTELQKAVGPEITKTDLVPAFQN--------------LMKDCEAEVRA--------AASHKVKE--------FCENLSADCRENVIMSQILPCIKELVSDANVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTLQKIGPILDNSTQDQDVVLSLA
6PROSPECT21w63A0.1190.9011.953threading_6MPAPIRLRRCRNVAKLLYHFGQLECLFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLVQGLALCTLGCMEVEKLLKTSNSYLRKKAALCAVHVIRKPELMEMFLPALHTSVVLL-TEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDSSEAMNDILAQVAVGNAILYETVLTIMDIKSESGLRVLAINILGRFLVALTSLLKTVQTDHNAVQRHRSTIVDCLK--------------------DLDVSIKRRAMEL--SFALVNGNNIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYGDLLEDEVLDILESVLISNMSTSVTRGYALTAIMKLS----------------------------TRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRSAERMPVMEK
7MUSTER3dh4A0.1220.8930.889threading_7LIQFIGMSGSGYSIGLAIASYEWMSAITLIIVGKYFLPIFIEKGIY----IPEFVEKRF--NKKLKTILAVF--WIS---LYIFVNLTSVLYLGGLALETILGIPLMYSILGLALFAL-SIVVWTDVIQVFFLVLGGFMTTYMAVSFIGGTDG-AGVSKMVDAAPGHFEMILDQSNPQYMNLPGIAVLIGGLWVANLYYWGFNQYIIQR-KSVSEAQKGIVFAAFLKLIVPFLVVLP-GIAAYVITSDPQLMASLGDIAATNLPSAANADKA-YPWLTQF-------LPGVKGVVFAALAAAIVSSLASMLNS-----TATIFTMDIYKEYISPDSGDHKLVNVGRTAA-LIIACLIAPMLGGIGQAFQYIQEYTGLVSPGILAVFLLGLFWTTSKGAIIGVVASIPFALFLK--MPLSMPFMDQMLYTLLFTMVVIAFTSLSTSINDDDPKGISVTSSMFVTDRSFNIAAYGIMIVLAVLYTLFWVLYK------------------------
8SPARKS3ibva0.1110.8560.727threading_8WNNESNLLELQMIRDSVWSYIKAYISNAVQHLLTLLLQLYPSNWNDFFASLQGVIAASEFSNFYLKVLLSIGDEISLVLKTDVQIQKDNLVKDAIRAMSDIVSFVYEMMLAYSN-------AKNYGTVGLCLQVYAQWVS--WI---------NINLIVN--------EPCMNLLYSFLAACETMTEIVNEKLN---LLNILNLNLFFSKTDPNFDEHVAKLINAQGVELVAIKSDPSSPELKENCSFQLYNLFPY--------------LIRYLSDDYDETSTAV-FPFLSDLLVS---------LRKESSSKELSASLKEFLKSLLEAIIKKDPDSEEEAEFQEMRKKLKIFQDTINSIDSFSSYMYSAITSSLSTAATLSPEN--SWQLIEFALYETYIVLSQILALVTTSQVCRHP---HPLVQLLYMEILVRYASFFDYESAAIP-ALIEYFVGPRGIHNTNER---------------VRPRAWYLFYRFVKSIKKQVVNYGDLLNIS
9PROSPECT23a6pA10.1070.8041.921threading_9AMDNALCEQLVKAVTVMCVPCGLRLAFGLQILEHVVKFRWNGMSRLEKVYLKNSVMELIAIKDALSRIVVEMIKREWPQHWPDMLIELDTLSKQGETQTELVMFILLR--LAEDVVTFQTLPPQRRTLTQNMERIFSFLLNTLQENVNKYQQVKTDT-------------------SQESKAQANCRVGVAALNTLAGYIDWVSMSHITAENCKLLEILCLL-----------------------LNEQELQLGAAE---------------------------------CLLIAVSRKGK-------LEDRKPLMVLFGDVAMHYILSAAQTADGGGLVEKHYVFLKRLCQVLCALGNQL-------CALLGADSDVETPSNFGKYLESFLAFTSQFLRSSTQMTWGALFRHEILSRDPLLLAIIPKYLRASMTNLVKMGFPSKTDSPSCEYSRFDFDSDEDFNAFFNSSRAQQGVMRLACRLDPKTSFQMAGEWLKY----------QLSTF
10PPA-I1is2A20.0980.7350.934threading_10------------------------------------------------------------------MNPDLRKERASATFNPELITHILDPENTRRRREIENLILNDPDFQKLTYGTMVFVRSFLVGNAAQSLSKACTIAIRYSAVRRQSEIK-------QSEPEPQILDFQTQQY--KLFPLLATAYAFHFVGRYMKETYLRINESIGQGDLSELPELHALTAGLKAFTTWTANAGIEECRMAYSHSSGIPNIYVTFTPACTFEGENTVMML-----------------QTARFLMKIYDQVRSGKLVGGMVSYLND--------------LPSVDINSLEGLTEAYKLRAARLVEIA---------AKNLQTHVSHRKSKEVAWNLTSVDLVRASEAHCHYVVVKVFSDKLPKIQDKQAVLRNLCLLYSLYGISQKGGDFLE---------GSII---------TGAQLSQVNARILELLTLIRPNAVALVDAF---DFKDMTLGSVLGRYD

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.521 to 2q6hA
SCOP code=f.54.1.1
TM-score=0.748 to 1slyA
SCOP code=a.118.5.1
TM-score=0.522 to 2q6hA
SCOP code=f.54.1.1
TM-score=0.938 to 2ooeA
SCOP code=a.118.8.7
TM-score=0.677 to 1wa5B
SCOP code=a.118.1.1