Template-based Modeling Results for ARND_ECOLI


  Submitted Primary Sequence

>Length 296
MTKVGLRIDVDTFRGTREGVPRLLEILSKHNIQASIFFSVGPDNMGRHLWRLVKPQFLWKMLRSNAASLYGWDILLAGTAWPGKEIGHANADIIREAAKHHEVGLHAWDHHAWQARSGNWDRQTMIDDIARGLRTLEEIIGQPVTCSAAAGWRADQKVIEAKEAFHLRYNSDCRGAMPFRPLLESGNPGTAQIPVTLPTWDEVIGRDVKAEDFNGWLLNRILRDKGTPVYTIHAEVEGCAYQHNFVDLLKRAAQEGVTFCPLSELLSETLPLGQVVRGNIAGREGWLGCQQIAGSR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTKVGLRIDVDTFRGTREGVPRLLEILSKHNIQASIFFSVGPDNMGRHLWRLVKPQFLWKMLRSNAASLYGWDILLAGTAWPGKEIGHANADIIREAAKHHEVGLHAWDHHAWQARSGNWDRQTMIDDIARGLRTLEEIIGQPVTCSAAAGWRADQKVIEAKEAFHLRYNSDCRGAMPFRPLLESGNPGTAQIPVTLPTWDEVIGRDVKAEDFNGWLLNRILRDKGTPVYTIHAEVEGCAYQHNFVDLLKRAAQEGVTFCPLSELLSETLPLGQVVRGNIAGREGWLGCQQIAGSR
CCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCHHHHHHHHHCCCHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEECHHHCCCHHHHHHHHHHHHHHHCCCEEEEHHHHCHHHCCCCCEEECCCCCCCEEEEECCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MTKVGLRIDVDTFRGTREGVPRLLEILSKHNIQASIFFSVGPDNMGRHLWRLVKPQFLWKMLRSNAASLYGWDILLAGTAWPGKEIGHANADIIREAAKHHEVGLHAWDHHAWQARSGNWDRQTMIDDIARGLRTLEEIIGQPVTCSAAAGWRADQKVIEAKEAFHLRYNSDCRGAMPFRPLLESGNPGTAQIPVTLPTWDEVIGRDVKAEDFNGWLLNRILRDKGTPVYTIHAEVEGCAYQHNFVDLLKRAAQEGVTFCPLSELLSETLPLGQVVRGNIAGREGWLGCQQIAGSR
43210020001112113200120031024220200000011222102001210223101201312112011110111010021320021002002201430100000000000213022233310121022003001300122110000211301330020122131211010211110212132231100100010001131112302231000000110142210000000120210200300120032014220200001201232022020010202123010002422339
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMTKVGLRIDVDTFRGTREGVPRLLEILSKHNIQASIFFSVGPDNMGRHLWRLVKPQFLWKMLRSNAASLYGWDILLAGTAWPGKEIGHANADIIREAAKHHEVGLHAWDHHAWQARSGNWDRQTMIDDIARGLRTLEEIIGQPVTCSAAAGWRADQKVIEAKEAFHLRYNSDCRGAMPFRPLLESGNPGTAQIPVTLPTWDEVIGRDVKAEDFNGWLLNRILRDKGTPVYTIHAEVEGCAYQHNFVDLLKRAAQEGVTFCPLSELLSETLPLGQVVRGNIAGREGWLGCQQIAGSR
1MUSTER3rxzA0.2160.7801.454threading_1KTAVAFTFDVDAESGPLVGVPRLLGILDEFNVPGTFFVP--------------------------------------------GYTAHRHPEPIRSIARGHEIAHHGYLHE----SLVGADEDTERKILTRGIEALEEVAGVHPVGYRAPWE--NWHTPKLLAEFGFLYDSTLDSDHPYELAVGDG--SLVELPVSWALDDWQQGLIETPAKAIELWRAELNDIGGAWVLTNHPFLSGRGRAAALREFIAEVCADDVWVAG-SQIAEHVRAQKL------TPR------TLTRPEL
2SPARKS3rxza0.2120.7803.711threading_2TCAVAFTFDVDAEYGPLVGVPRLLGILDEFNVPGTFFVP--------------------------------------------GYTAHRHPEPIRSIARGHEIAHHGYLHE----SLVGADEDTERKILTRGIEALEEVAGVHPVGYRAPWE--NWHTPKLLAEFGFLYDSTLDSDHPYELAVGDG--SLVELPVSWALDDWQQGLIETPAKAIELWRAELNAIGGAWVLTNHPFLSGRGRAAALREFIAEVCADDVWVAG-SQIAEHVRAQKLTPRTLTPELT------------
3PROSPECT23rxzA0.2240.7842.177threading_3LTPVAFTFDVDAESGPLVGVPRLLGILDEFNVPGTFFV------PGYTAHR--------------------------------------HPEPIRSARAGHEIAHHGYLH----ESLVGADEDTERKILTRGIEALEEVAGVHPVGYRAPWENWH--TPKLLAEFGFLYDSTLDSDHPYE--LAVGDGSLVELPVSWALDDWQQGLIETPAKAIELWRAELRDIGGAWVLTNHPFLSGRGRAAALREFIAEVCADDV-WVAGSQIAEHVRAQKLTPRTLTRPE-----------LT
4PPA-I3rxzA0.2110.7842.426threading_4TCAVAFTFDVDAESGPLVGVPRLLGILDEFNVPGTFFVP--------------------------------------------GYTAHRHPEPIRSIARGHEIAHHGYLHE----SLVGADEDTERKILTRGIEALEEVAGVHPVGYRAPWE--NWHTPKLLAEFGFLYDSTLDSDHPYELAVGDGSL--VELPVSWALDDWQQGLIETPAKAIELWRAELNDIGGAWVLTNHPFLSGRGRAAALREFIAEVCADDVWVAG-SQIAEHVRAQKLTPRTLTRPELT-----------
5HHPRED-l2c1i_A0.1530.6624.246threading_5QKVVALTFN----DGPNATTPQVLETLAKYDIKATFFVLGK-------------------------------------------NVSGNEDLVKRIKSEGHVVGNHSWSHPI----LSQLSLDEAKKQITDTEDVLTKVLGSSSKLMRPPYGAITDDI---RNSLDLSF--------------------------IMWDVDSLDWKSKNEASILTEIQHQVAN---GSIVLMHDIH--SPTVNALPRVIEYLKNQGYTFVTIPEMLNTRLKAHELYYSRDE---------------
6HHPRED-g3s6o_A0.1420.8554.855threading_6RARVAVQFVLNYEEGGENCV------LHGDPASEQFLSEIVGESIYEYGSRAGVWRILR----------EFDKRGLPLTVFGVGMAIERHPELARAFELGHEIACHGWRWIHYQ----DMTPEREAEHMRLGMEAIERVTGVRPLGWYT--GRDSPNTHRLVAEYGFLYDSDHYGDDPFWMDVGGASVPQLIVPYTLDANDMRFATGNTADDAFDVLYEEGDEAPKMMSIGMHCRLLGRPRFRALQRFLDHIEHDRVWVARRVEIARHWREHHPY---------------------
7SP33rxza0.2110.7843.783threading_7VSAVAFTFDVDAESGPLVGVPRLLGILDEFNVPGTFFV------PGYTAHR--HPEPIRSIAR-----------------------------------AGHEIAHHGYLH----ESLVGADEDTERKILTRGIEALEEVAGVHPVGYRAPWE--NWHTPKLLAEFGFLYDSTLDSDHPYELAVGDG--SLVELPVSWALDDWQQYCFVTPAKAIELWRAELNAIGGAWVLTNHPFLSGRGRAAALREFIAEVCADDVWVAG-SQIAEHVRAQKLTPRTLTPELT------------
8SAM-T993qbuA0.1860.7644.317threading_8EILVAYGVDIDAVFAGEVGIPRLLKLFKKYHLPATWFVP--------------------------------------------GHSIETFPEQMKMIDAGHEVGAHGYSHEN----PIAMSTKQEEDVLLKSVELIKDLTGKAPTGYVAPWWEFSNITNELLLKHGFKYDHSLMHFTPMKPLIRGVETNLVEIPANWYLDDLPPMMFIKKGQMWIDQFDWVYRDYAVFSMTIHPDVSARPVLLMHEKIIEHINKEGVRWVTFNEIADDFLKRNP----------------------
9MUSTER2c79A0.1850.6761.342threading_9-KLVALTFDDGPD---NVLTARVLDKLDKYNVKATFMVV-------------------------------------------GQRVNDSTAAIIRRMVNGHEIGNHSWSY----SGMANMSPDQIRKSIADTNAVIQKYAGTTPKFFRPPNLETSPTLFNNV--------------------------DLVFV-GGLTANDW--IPSTTAEQRAAAVINGVRDGT---IILLHDVQEPHPTPEALDIIIPTLKSRGYEFVTLTELFTLKVPIDP------SVK-------RMYNSV
10SPARKS3qbua0.1850.7673.607threading_10EILVAYGVDIDALFAGEVGIPRLLKLFKKYHLPATWFV--------------------------------------------PGHSIETFPEQMKMIDAGHEVGAHGYSHE----NPIAMSTKQEEDVLLKSVELIKDLTGKAPTGYVAPWWEFSNITNELLLKHGFKYDHSLMHNTPYYPLIRGVETNLVEIPANWYLDDLPPFGFVSPRDIGQMWIDQFDWDYAVFSMTIHPDVSARQVLLMHEKIIEHINHEGVRWVTFNEIADDFLKRNPR---------------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.704 to 2c1gA
SCOP code=c.6.2.3
TM-score=0.706 to 2c1gA
SCOP code=c.6.2.3
TM-score=0.702 to 2c1gA
SCOP code=c.6.2.3
TM-score=0.697 to 2c1gA
SCOP code=c.6.2.3
TM-score=0.704 to 2c1gA
SCOP code=c.6.2.3