Template-based Modeling Results for ATP6_ECOLI

Submitted Primary Sequence

>Length 271
MASENMTPQDYIGHHLNNLQLDLRTFSLVDPQNPPATFWTINIDSMFFSVVLGLLFLVLFRSVAKKATSGVPGKFQTAIELVIGFVNGSVKDMYHGKSKLIAPLALTIFVWVFLMNLMDLLPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFILILFYSIKMKGIGGFTKELTLQPFNHWAFIPVNLILEGVSLLSKPVSLGLRLFGNMYAGELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLSMASEEH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MASENMTPQDYIGHHLNNLQLDLRTFSLVDPQNPPATFWTINIDSMFFSVVLGLLFLVLFRSVAKKATSGVPGKFQTAIELVIGFVNGSVKDMYHGKSKLIAPLALTIFVWVFLMNLMDLLPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFILILFYSIKMKGIGGFTKELTLQPFNHWAFIPVNLILEGVSLLSKPVSLGLRLFGNMYAGELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLSMASEEH
CCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MASENMTPQDYIGHHLNNLQLDLRTFSLVDPQNPPATFWTINIDSMFFSVVLGLLFLVLFRSVAKKATSGVPGKFQTAIELVIGFVNGSVKDMYHGKSKLIAPLALTIFVWVFLMNLMDLLPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFILILFYSIKMKGIGGFTKELTLQPFNHWAFIPVNLILEGVSLLSKPVSLGLRLFGNMYAGELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLSMASEEH
5543311121000100110312121111122312212000000000000000000000001000331232111101000100010010001201223232000000000000000000300022001100221111211221111211000000000000000100212000000120012211210010000001002100200100010000000010000000000110020000001000200110010000000000101211334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MASENMTPQDYIGHHLNNLQLDLRTFSLVDPQNPPATFWTINIDSMFFSVVLGLLFLVLFRSVAKKATSGVPGKFQTAIELVIGFVNGSVKDMYHGKSKLIAPLALTIFVWVFLMNLMDLLPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFILILFYSIKMKGIGGFTKELTLQPFNHWAFIPVNLILEGVSLLSKPVSLGLRLFGNMYAGELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLSMASEEH
1	MUSTER	1c17M	0.993	0.524	1.597	threading_1	----------------------------------------------------------------------------------------------HGKSKLIAPLALTIFVWVFLMNLMDLLPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFILILFYSIKMKS-----------------------------LLSKPVSLGLRLFGNMYAGELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLS------
2	PROSPECT2	3kb9A	0.092	0.967	1.481	threading_2	AVPPRLMPADKVEEYADGLCYTDLMAGYYLGAPD---------EVLQAIADYSAWFFVWDDRHDRDIVHGRAGAWRRLRGLLVAGFADSVRRLYAFLPATWNARFARHFHTVIEAYDREFPGVEEYLELRRLTFAHWIWSGCELPDAVRKHPAYRRAALLSQEFAAWYNDLCSLPKEIAGDEVHNLGISLITHLEEAIGEVRRRVEECITEFLAVERDALRFADELADGTVRGKELSGAVRANVGNMRNWFSSVYWFHHESGYMVDSWDDN
3	PROSPECT2	3a0oA3	0.065	0.967	1.412	threading_3	AVAKDPNHCGWAEFYEKSVERPVMPEPQPYPNNTRVATLWRQMYIDCQEVIYAIRHLAIAGRVLGR---------DDLLDASRKWLLAVAAKGATSRAYNDEAGFRVVVALAWGYDWLYDHLLERTREVADHVIAHARIHVFPYDSHAVRSLSAVLTPACIEAGEWLDYTVEFLATLYSPWAGTMTGMAYLIEAANLIRSYIGYDLYQRPFFQNTGRLKLGYNVRQFAGVTGNGHYQWYFDHIKADAAFYNYGWWDLNFDDLVYRHDYPQV
4	PROSPECT2	2bkuB2	0.085	0.952	1.379	threading_4	SASISTFVMDKLGQTMSVDENQLTLEDAQ------------SLQELQSNILTVLAAVILMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYLETFSPYLLKALAVGFIADISNSLEEDFRRYSDAMMNVLAQMISNPNARRELKPAVLSVFGDIASNIGADLNDIMALCVAAQNTKPENGTLEALDYQIKVLEAVLDAYVGIVAGLHFPYVGTIFQFIAQVAEDPQLYSEDATSRAAVGLIGDIAAMWVIDYIKRTQQKRQL-SL
5	SPARKS	1c17m	0.986	0.524	2.072	threading_5	----------------------------------------------------------------------------------------------HGKSKLIAPLALTIFVWVFLMNLMDLLPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFILILFYSIKMKSL-----------------------------LSKPVSLGLRLFGNMYAGELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLS------
6	PROSPECT2	2qfcA	0.072	0.926	1.353	threading_6	LSENICHQSEVSRIESGAVYPSMDILQGIAAKLQIPIIHFYEVLIYSDIERKKQFKDQVIMLCKQKR---------------YKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQL----TGIDVYQNLYIENAIANIYAENGYLKKGIDLFLKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIELIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDILEMHAYKE-ALVNKISRL
7	PPA-I	1c17M	0.993	0.524	2.266	threading_7	----------------------------------------------------------------------------------------------HGKSKLIAPLALTIFVWVFLMNLMDLLPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFILILFYSIKMKS-----------------------------LLSKPVSLGLRLFGNMYAGELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLS------
8	HHPRED-l	1c17_M	1.000	0.524	10.848	threading_8	----------------------------------------------------------------------------------------------HGKSKLIAPLALTIFVWVFLMNLMDLLPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFILILFYSIKMK-----------------------------SLLSKPVSLGLRLFGNMYAGELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLS------
9	HHPRED-g	1c17_M	1.000	0.524	9.385	threading_9	----------------------------------------------------------------------------------------------HGKSKLIAPLALTIFVWVFLMNLMDLLPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFILILFYSIKMK-----------------------------SLLSKPVSLGLRLFGNMYAGELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLS------
10	SP3	1c17m	0.986	0.524	0.821	threading_10	----------------------------------------------------------------------------------------------HGKSKLIAPLALTIFVWVFLMNLMDLLPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFILILFYSIKMKSL-----------------------------LSKPVSLGLRLFGNMYAGELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLS------

Predicted Tertiary Structure


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TM-score=0.724 to 1c17M SCOP code=f.18.1.1	TM-score=0.723 to 1hm7B SCOP code=a.128.1.4	TM-score=0.723 to 1c17M SCOP code=f.18.1.1	TM-score=0.579 to 1j0nA SCOP code=a.102.3.2	TM-score=0.733 to 3ea5B SCOP code=a.118.1.1