Template-based Modeling Results for CCMH_ECOLI

Submitted Primary Sequence

>Length 350
MRFLLGVLMLMISGSALATIDVLQFKDEAQEQQFRQLTEELRCPKCQNNSIADSNSMIATDLRQKVYELMQEGKSKKEIVDYMVARYGNFVTYDPPLTPLTVLLWVLPVVAIGIGGWVIYARSRRRVRVVPEAFPEQSVPEGKRAGYVVYLPGIVVALIVAGVSYYQTGNYQQVKIWQQATAQAPALLDRALDPKADPLNEEEMSRLALGMRTQLQKNPGDIEGWIMLGRVGMALGNASIATDAYATAYRLDPKNSDAALGYAEALTRSSDPNDNRLGGELLRQLVRTDHSNIRVLSMYAFNAFEQQRFGEAVAAWEMMLKLLPANDTRRAVIERSIAQAMQHLSPQESK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRFLLGVLMLMISGSALATIDVLQFKDEAQEQQFRQLTEELRCPKCQNNSIADSNSMIATDLRQKVYELMQEGKSKKEIVDYMVARYGNFVTYDPPLTPLTVLLWVLPVVAIGIGGWVIYARSRRRVRVVPEAFPEQSVPEGKRAGYVVYLPGIVVALIVAGVSYYQTGNYQQVKIWQQATAQAPALLDRALDPKADPLNEEEMSRLALGMRTQLQKNPGDIEGWIMLGRVGMALGNASIATDAYATAYRLDPKNSDAALGYAEALTRSSDPNDNRLGGELLRQLVRTDHSNIRVLSMYAFNAFEQQRFGEAVAAWEMMLKLLPANDTRRAVIERSIAQAMQHLSPQESK
CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRFLLGVLMLMISGSALATIDVLQFKDEAQEQQFRQLTEELRCPKCQNNSIADSNSMIATDLRQKVYELMQEGKSKKEIVDYMVARYGNFVTYDPPLTPLTVLLWVLPVVAIGIGGWVIYARSRRRVRVVPEAFPEQSVPEGKRAGYVVYLPGIVVALIVAGVSYYQTGNYQQVKIWQQATAQAPALLDRALDPKADPLNEEEMSRLALGMRTQLQKNPGDIEGWIMLGRVGMALGNASIATDAYATAYRLDPKNSDAALGYAEALTRSSDPNDNRLGGELLRQLVRTDHSNIRVLSMYAFNAFEQQRFGEAVAAWEMMLKLLPANDTRRAVIERSIAQAMQHLSPQESK
22100000000000000112322314232112103300330201303212123131200110121012004423123200210032011100020312210011000000010000000002024323223322233222312210001000000000000000012011131022012013212210230122312212331022002002210442121130010002001211202100200110041123203000000100021223331420020022004213221300000010012232022002002200521223221111012002201422243335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRFLLGVLMLMISGSALATIDVLQFKDEAQEQQFRQLTEELRCPKCQNNSIADSNSMIATDLRQKVYELMQEGKSKKEIVDYMVARYGNFVTYDPPLTPLTVLLWVLPVVAIGIGGWVIYARSRRRVRVVPEAFPEQSVPEGKRAGYVVYLPGIVVALIVAGVSYYQTGNYQQVKIWQQATAQAPALLDRALDPKADPLNEEEMSRLALGMRTQLQKNPGDIEGWIMLGRVGMALGNASIATDAYATAYRLDPKNSDAALGYAEALTRSSDPNDNRLGGELLRQLVRTDHSNIRVLSMYAFNAFEQQRFGEAVAAWEMMLKLLPANDTRRAVIERSIAQAMQHLSPQESK
1	MUSTER	3fp3A	0.113	0.957	1.526	threading_1	IEFTTKALEISKALLRRASA--ESLGNFTDAMFDLSVLSLN-----GDFDGASIEPMLERNLNKQAMKVLNENLSNTSLASFFSHLEVSSVNTSSNYDTAYALLSDALQRLYSATDEGYLVAND----LLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLDAQVLLQESINLHPT-PNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGK---FTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQEKIHVGIGPLIGKATILARQSENA
2	SPARKS	3as4a	0.160	0.483	2.978	threading_2	-------------------------------------------------------------------------------------------------------------------------------------------------------DIRQVYYRDKGISHAKAGRYSQAVMLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGR---FDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEALPHFKKANELD---------------------------
3	PROSPECT2	2ooeA	0.071	1.000	1.711	threading_3	MRFWKLYIEAEIKEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPALDKIGMEIMSYQIWVDYINFLKGVEAVGSENQRITAVRRVYQRGCVNPMINIEQLWRDYNSRDYMNARRVAKEYETVMKGLDRNAPSVPPQPQEAQQVDMWKKYIQWELITKRVMFAYEQCLLVLGHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDTLVYIQYMKFARRAEGSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLADV
4	PPA-I	2q7fA	0.088	0.551	1.770	threading_4	-------------------------------------------------------------------------------------------------------------------------------------------AAEAFTKAIEENKEDAIPYINFANLLSSVNEERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGM---LDEALSQFAAVTEQDPGHADAFYNAGVTYAYKENREKALEMLDKAIDIQPDHMLALHAKKL---------------
5	HHPRED-l	2kw0_A	1.000	0.231	2.567	threading_5	------------------TIDVLQFKDEAQEQQFRQLTEELRCPKCQNNSIADSNSMIATDLRQKVYELMQEGKSKKEIVDYMVARYGNFVTYDPPLTP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6	SP3	3as4a	0.160	0.483	2.793	threading_6	-------------------------------------------------------------------------------------------------------------------------------------------------------DIRQVYYRDKGISHAKAGRSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGR---FDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEALPHFKKANELD---------------------------
7	HHPRED-g	2kw0_A	1.000	0.231	2.953	threading_7	------------------TIDVLQFKDEAQEQQFRQLTEELRCPKCQNNSIADSNSMIATDLRQKVYELMQEGKSKKEIVDYMVARYGNFVTYDPPLTP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8	SAM-T99	2hl7A	0.600	0.229	3.385	threading_8	----------------HMAIDTYEFASDAERERFRNLTQELRCPKCQNQDIADSNAPIAADLRKQIYGQLQQGKSDGEIVDYMVARYGDFVRYKPP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9	SPARKS	2xpia	0.121	0.971	2.868	threading_9	DAFWLAQVYCYARAKCLLTKEDLYNRSSACRYLAAFCLVKLETNPFRMQDGGIKLEASMCYLRGQVYTN--LSN-FDRAKECYKEA----LMVDAKLTADEEWDLVLKLYSTYSKEDAAFLRSLYMLKLNKTSHEDELRRAEDYLSSINGLEKSSDLLLCKADTLFVRSRIDVLAITTKILEIDPYNLDVYPLHLASLHESGEKNKLYLISNDLVDRHPEKAVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGE---HDQAISAYTTAARLFQGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAINHQ
10	PROSPECT2	1w3bA	0.131	0.940	1.693	threading_10	ELAHREYQFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQ--------CRRLDRSAHFSTLAIKNLGNVYKERGQLQEAIEHYALRLKPDF----------IDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCALGRLEEAKACYLKAIETAVAWSNLGCVFNAQGEIWLIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGS---VAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLFADAYSNMGNTLKEMQD

Predicted Tertiary Structure


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TM-score=0.579 to 1xnfB SCOP code=a.118.8.1	TM-score=0.614 to 2q7fA SCOP code=k.38.1.1	TM-score=0.710 to 2ooeA SCOP code=a.118.8.7	TM-score=0.763 to 2q7fA SCOP code=k.38.1.1	TM-score=0.354 to 2dahA SCOP code=a.5.2.1