Template-based Modeling Results for CYSQ_ECOLI


  Submitted Primary Sequence

>Length 246
MLDQVCQLARNAGDAIMQVYDGTKPMDVVSKADNSPVTAADIAAHTVIMDGLRTLTPDVPVLSEEDPPGWEVRQHWQRYWLVDPLDGTKEFIKRNGEFTVNIALIDHGKPILGVVYAPVMNVMYSAAEGKAWKEECGVRKQIQVRDARPPLVVISRSHADAELKEYLQQLGEHQTTSIGSSLKFCLVAEGQAQLYPRFGPTNIWDTAAGHAVAAAAGAHVHDWQGKPLDYTPRESFLNPGFRVSIY
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLDQVCQLARNAGDAIMQVYDGTKPMDVVSKADNSPVTAADIAAHTVIMDGLRTLTPDVPVLSEEDPPGWEVRQHWQRYWLVDPLDGTKEFIKRNGEFTVNIALIDHGKPILGVVYAPVMNVMYSAAEGKAWKEECGVRKQIQVRDARPPLVVISRSHADAELKEYLQQLGEHQTTSIGSSLKFCLVAEGQAQLYPRFGPTNIWDTAAGHAVAAAAGAHVHDWQGKPLDYTPRESFLNPGFRVSIY
CHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHCCCCCEEEEEEEEECCEEEEEEEEECCCCCEEEEECCCEEEECCCCCEECCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MLDQVCQLARNAGDAIMQVYDGTKPMDVVSKADNSPVTAADIAAHTVIMDGLRTLTPDVPVLSEEDPPGWEVRQHWQRYWLVDPLDGTKEFIKRNGEFTVNIALIDHGKPILGVVYAPVMNVMYSAAEGKAWKEECGVRKQIQVRDARPPLVVISRSHADAELKEYLQQLGEHQTTSIGSSLKFCLVAEGQAQLYPRFGPTNIWDTAAGHAVAAAAGAHVHDWQGKPLDYTPRESFLNPGFRVSIY
313101200230020002103223311122222211001001001200020023101300000122232232233221000000010021003411100000000232200000000002210000021100212222122132431430000002212222022002311321000000001000002120100010020010000000000120201001131221211233112111000002
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMLDQVCQLARNAGDAIMQVYDGTKPMDVVSKADNSPVTAADIAAHTVIMDGLRTLTPDVPVLSEEDPPGWEVRQHWQRYWLVDPLDGTKEFIKRNGEFTVNIALIDHGKPILGVVYAPVMNVMYSAAEGKAWKEECGVRKQIQVRDARPPLVVISRSHADAELKEYLQQLGEHQTTSIGSSLKFCLVAEGQAQLYPRFGPTNIWDTAAGHAVAAAAGAHVHDWQGKPLDYTPRESFLNPGFRVSIY
1MUSTER3lv0A0.2390.9883.341threading_1VMNVMVQAAMKAGRSLVRDYGEVQNLQVSLKGPADYVSQADRKAEKIIFNELSKARPKFGFLMEESEEI--IGEDSQHRFIVDPLDGTTNFLHGIPFFAVSIALESQGKIVAGVIYNPINDELFTAERGSGAFFNDRRCRVSARRRLEDCVIATGMPHLPLIELRNVMAEVSGIRRFGTAALDLAYVAAGRTDGFWEDN-LQIWDMAAGILMVREAGGFVTDKEGGNDIFRKKNIIANEHIRIKLE
2SPARKS3qmfa0.1880.9515.276threading_2IDKLICSWLKQIDNVIPQLIMEMTT--ETKRHRFDLVTNVDKQIQQQFQQFLATYFPEHQLLAENEI---------NHLWIMDPIDGTANLVKQQEDYCIILAYFYEGKPMLSYVYDYPHKKLYKAIRGEGAFCNGIKMEEPPSLKLEDAIISFNAQVMNLDTVQDLFDASFSYRLVGACGLDSMRVAKGQFGAHINTN-PKPWDIAAQFLFAELLNLKMTTLDGKAIDHLKGAPFINKACHETVL
3PROSPECT22qflA0.2620.9634.713threading_3MLNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHTIITEESGE--LEGTDQDVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFKAKQYATTYINICADFRATGSAALDLAYVAAGRVDGFFEIGL-RPWDFAAGELLVREAGGIVSDFTGGHNYMLT------GNIVAGLS
4PPA-I3lv0A0.2300.9884.778threading_4VMNVMVQAAMKAGRSLVRDYGEVQNLQVSLKGPADYVSQADRKAEKIIFNELSKARPKFGFLMEESEEI--IGEDSQHRFIVDPLDGTTNFLHGIPFFAVSIALESQGKIVAGVIYNPINDELFTAERGSGAFFNDRRCRVSARRRLEDCVIATGMPHLPLIELRNVMAEVSGIRRFGTAALDLAYVAAGRTDGFWEDN-LQIWDMAAGILMVREAGGFVTDKEGGNDIFRKKNIIAGNEHIRIKL
5HHPRED-l3b8b_A0.4650.9353.868threading_5NA-AAIDAALKAGEKILSIYEDKSDFEI---ADNSPLTIADRKAHEAIVAILNE-TP-FPVLSEEGK--DYVRRGWDTLWIVDPLDGTKEFIKRNGEFTVNIALVQNAVPV-GVIYVPVKKELYFAVEGTGAYK-EKSER-PLADARDHFIAVASRSHLTPETETYIADGNVELISSGS-SIKICLVAEGKADVYPRFAPT-EWDTAAGHAIARAAG-EVYQAKEEPLRYN-KEDLLNPWFIVEA-
6HHPRED-g3b8b_A0.4760.9473.399threading_6NA-AAIDAALKAGEKILSIYEDKSDFEI---ADNSPLTIADRKAHEAIVAILNE-TP-FPVLSEEGK-DYAVRRGWDTLWIVDPLDGTKEFIKRNGEFTVNIALVQNAVPV-GVIYVPVKKELYFAVEGTGAYK-SKSER-PLADARDHFIAVASRSHLTPETETYIADLGNVELISSGSSIKICLVAEGKADVYPRFAPT-EWDTAAGHAIARAAG-EVYQAKEEPLRYN-KEDLLNPWFIVEAK
7SP33qmfa0.1880.9515.133threading_7IDKLICSWLKQIDNVIPQLIMEMT--TETKRHRFDLVTNVDKQIQQQFQQFLATYFPEHQLLAENEI---------NHLWIMDPIDGTANLVKQQEDYCIILAYFYEGKPMLSYVYDYPHKKLYKAIRGEGAFCNGIKMEEPPSLKLEDAIISFNAQVMNLDTVQDLFDASFSYRLVGACGLDSMRVAKGQFGAHINTN-PKPWDIAAQFLFAELLNLKMTTLDGKAIDHLKGAPFINKACHETVL
8SAM-T993b8bA0.4550.9474.216threading_8-NAAAIDAALKAGEKILSIYED--PKSDFEIADNSPLTIADRKAHEAIVAILNE--TPFPVLSEEG--DYAVRRGWDTLWIVDPLDGTKEFIKRNGEFTVNIALVQNAVPV-GVIYVPVKKELYFAVEGTGAYKQIEKSERPLADARDHFIAVASRSHLTPETETYIADLGNVELISSGSSIKICLVAEGKADVYPRFA-PTEWDTAAGHAIARAAGEVYQAGKEEPLRYNKED-LLNPWFIV---
9MUSTER2p3nA0.2300.9723.246threading_9RLDFSIKLLRKVGHLLMIHWGRVDNVEKK-TGFKDIVTEIDREAQRMIVDEIRKFFPDENIMAEEGIF-----EKGDRLWIIDPIDGTINFVHGLPNFSISLAYVENGEVKLGVVHAPALNETLYAEEGSGAFFNGERIRVSENASLEECVGSTGSYVFTGKFIERMEKRTRRIRILGSAALNAAYVGAGRVDFFVTWR-INPWDIAAGLIIVKEAGGMVTDFSGKEANAFSKNFIFSNGLIHEVV
10SPARKS3luza0.2300.9355.167threading_10VMNVMVQAAMKAGRSLVRDYGE------------DYVSQADRKAEKIIFNELSKARPKFGFLMEESEEI--IGEDSQHRFIVDPLDGTTNFLHGIPFFAVSIALESQGKIVAGVIYNPINDELFTAERGSGAFFNDRRCRVSARRRLEDCVIATGMP-TYLIELRNVMAEVSGIRRFGTAALDLAYVAAGRTDGFWEDN-LQIWDMAAGILMVREAGGFVTDKEGGNDIFRKKNIIAGNEHIRIKL

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.867 to 1dk4A
SCOP code=e.7.1.1
TM-score=0.870 to 1dk4A
SCOP code=e.7.1.1
TM-score=0.835 to 1dk4A
SCOP code=e.7.1.1
TM-score=0.817 to 1dk4A
SCOP code=e.7.1.1
TM-score=0.868 to 1dk4A
SCOP code=e.7.1.1