Template-based Modeling Results for DAMX_ECOLI

Submitted Primary Sequence

>Length 428
MDEFKPEDELKPDPSDRRTGRSRQSSERSERTERGEPQINFDDIELDDTDDRRPTRAQKERNEEPEIEEEIDESEDETVDEERVERRPRKRKKAASKPASRQYMMMGVGILVLLLLIIGIGSALKAPSTTSSDQTASGEKSIDLAGNATDQANGVQPAPGTTSAENTQQDVSLPPISSTPTQGQTPVATDGQQRVEVQGDLNNALTQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRDTAKTQTAERPSTTRPARQQAVIEPKKPQATVKTEPKPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASPAQTTATPAAGAKTAGNVGSLKSAPSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVYETTRNGQPWYVLVSGVYASKEEAKKAVSTLPADVQAKNPWAKPLRQVQADLK
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDEFKPEDELKPDPSDRRTGRSRQSSERSERTERGEPQINFDDIELDDTDDRRPTRAQKERNEEPEIEEEIDESEDETVDEERVERRPRKRKKAASKPASRQYMMMGVGILVLLLLIIGIGSALKAPSTTSSDQTASGEKSIDLAGNATDQANGVQPAPGTTSAENTQQDVSLPPISSTPTQGQTPVATDGQQRVEVQGDLNNALTQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRDTAKTQTAERPSTTRPARQQAVIEPKKPQATVKTEPKPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASPAQTTATPAAGAKTAGNVGSLKSAPSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVYETTRNGQPWYVLVSGVYASKEEAKKAVSTLPADVQAKNPWAKPLRQVQADLK
CCCCCCHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MDEFKPEDELKPDPSDRRTGRSRQSSERSERTERGEPQINFDDIELDDTDDRRPTRAQKERNEEPEIEEEIDESEDETVDEERVERRPRKRKKAASKPASRQYMMMGVGILVLLLLIIGIGSALKAPSTTSSDQTASGEKSIDLAGNATDQANGVQPAPGTTSAENTQQDVSLPPISSTPTQGQTPVATDGQQRVEVQGDLNNALTQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRDTAKTQTAERPSTTRPARQQAVIEPKKPQATVKTEPKPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASPAQTTATPAAGAKTAGNVGSLKSAPSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVYETTRNGQPWYVLVSGVYASKEEAKKAVSTLPADVQAKNPWAKPLRQVQADLK
55523233322222232321323322322342341212020220302323323123234343333323332332333223333233323334422333122322222201111222222212223122222333222233223212222332222222322222332333222222222223232322232333231323233222323333323322232222232222222432322332242322342222432433222334423222423333223234423322322224222222222343222223232223232222322223222322223222223100100212223102100442423320001112333200000002121131024003301220343222022133013325
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MDEFKPEDELKPDPSDRRTGRSRQSSERSERTERGEPQINFDDIELDDTDDRRPTRAQKERNEEPEIEEEIDESEDETVDEERVERRPRKRKKAASKPASRQYMMMGVGILVLLLLIIGIGSALKAPSTTSSDQTASGEKSIDLAGNATDQANGVQPAPGTTSAENTQQDVSLPPISSTPTQGQTPVATDGQQRVEVQGDLNNALTQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRDTAKTQTAERPSTTRPARQQAVIEPKKPQATVKTEPKPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASPAQTTATPAAGAKTAGNVGSLKSAPSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVYETTRNGQPWYVLVSGVYASKEEAKKAVSTLPADVQAKNPWAKPLRQVQADLK
1	MUSTER	1w0sA	0.098	0.951	1.586	threading_1	-DPVLCFTQYEESSGKKGLLGGGVSVEDAYQKRSGGLCQPCRSPRWSLWSTWAPLRYRRCVGWNGQCSGKVAPGTLEWQLQEDQQCCPEMGGWSGWGPWEPCSVTCSKGTR-----TRRRACNHPAPKCGGHCPGQAQESEACDTQQVCPTHGAWATWGPWTPCSASCHGGPHEPKETRSRKCSAPEPSQKPPGKPCPGLAYEQRRCTGLPPCPVAGGWGPWGPVSPCPVTRTCNHPVPQHGGPFCAGDATRTHICNTAVPCPVDGEWDSWGEWSPCIRRNMKSISCQEIPGQQSRGRTCRGRKFDGHRCAGQQQDIRHCYSIQHCPLKGSWSEWSTWGLCMPPCGPNPTRARQRLCTPLLPKYPPTVSVEGQGEKNVTFWGRPLP----EELQGQKEEKRPCLHVPA---CKDPEEEEL--------
2	SPARKS	1c7na	0.069	0.876	0.733	threading_2	---------MIYDFTSRKNLGSLKWDLMYSQNPEGNEVVPL---SVADMEFKNPPELIEGLKKYLDETVLGYTG----PTEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAV---------------------REFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLSKDKNNCSPHNPVGRVWKKDELQKIKDIVLKSDLMSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLA--APSSVIQESLERLNKALKDLK--------------
3	PROSPECT2	1w0rA	0.078	0.902	2.998	threading_3	DPVLCFTQYEESEDCCLNTAFAYQKRSGGLCQPCRSPRVGWNGQCSGKVAPGTLEWQLQACEDQQCCPEMGGWSGWGPWEPCSVTRRACNHPAPKCGGHCPGQAQESEACDTQQVCPTHGAWATWGPWTPCSASCHGGPHEPKETRSRKCSAPEPSQKPPGKPCPGLAYEQRRCTGLPPCPVAGGWGPWGPVSPCPVTRTCNHPVPQHGGPFCAGDATRTHICNTAVPCPVDGEWDSWGEWSPCIRRNMKSISCQEIPGQQSRGRTCRGRKFDGHRCAGQQQDIRHCYSIQHCPLKGSWSEWSTWGLCMPPCGPNPTRARQRLCTPLLPKYPPTVSMVEGQGEKNVTFWGRPLPRCEEL---------------------QGQKLVVEEKRPCLHVPAC-------------KDPEEEE--------L
4	PPA-I	2bsgA	0.087	0.836	1.597	threading_4	LNDL-PFVDGPPAEGQSRISWIKNGEEILGADTQSEGSMNRPTVSVLRNVEVLDKNIGILKTSLETANSDIKTIQINKKDISDLKTLTSEHTEILNGTNNTVDSILADIIRNDLLWIKRELMKHRIINNTDVITSQGIRLSLTIEVGNLREELVYSRLNEIDTKQTTVESDISAIKTSISIITSVNTNTDNIASINLEIKQRLTVIETSIIKGQIKDNTTSILRANVSWLNQIVSLLNRVSTIETSVSGLNNAVQNLQVEIGNNSAGIKGQVVALNTLVNGTNPNGSTVEERGLTNSIKANETNIASVTQEVNTAKGNISSLQGDVQALQEAGYIPEAPRDGQAYVRKDGEWVFLSTFL---------------------------------------------------------------------
5	HHPRED-l	1x60_A	0.152	0.185	1.572	threading_5	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKKTSSSGLYKVQIGAFKVKANADSLASNAEAKGFDSIV--LLKDGLYKVQIGAFSSKDNADTLAARAKNA--GFDAIVILES-------
6	HHPRED-g	1uta_A	0.130	0.180	1.333	threading_6	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KDERRWMVQCGSFRGAEQAETVRAQLAFEGFDSK--ITTNNGWNRVVIGPVKGKENADSTLNRL-KMAGHTNCIRLAAGG------
7	SP3	3rpka	0.096	0.995	0.563	threading_7	ATD-GDDKIANELAGNKVGVLPANAKETNNEDENGQTLVNIDPQTFKLSGAPATAKKLTEAENTANLPAIYEIHSLSTYVGEDGAT-LTGSKAVPELPLNDVYPKNTEAKPKIDKDFKGKANPDTPRVDKDTPVNHQVGDVPALANYATANWSDRTEGLAFNKGTVKVTVDDVALEAGDYALTEVATGFDLKLTDAGLAKVNDQNAEKTVKITYSATLNDKAIVEVPESNDVTFNYGNNPDHGNTPKPNKPNENGDLTLTKTWVDATGAPIPAGAEATFDLVNAQTGKVVQTVTLTTDKNTVTVNGLDKNTEVERSIKGYSADYQEITTAGEIAVKNWKDENPKPLDPTEPKVVTYGKKFVKVNDKDNRLAGAEFVIANADNAGQYLARKADKVSQEEKQLVVTTKDALDRAVAAYNALTAQQQTQQE
8	SAM-T99	1unlA	0.115	0.507	0.576	threading_8	RVRLDDDDEGVPSSALREICLLKKNIVRLHDVLHSDKKLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVYSTSIDMWSAGCIFAELANAG--------------------------------------------RPLFPGNDVDDQL-------------------------------------------------------------------------------KRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPAT----TSLVNVVPKL------------NATGRDLLQNL-----------------------------LKCNPVQR--------------SAEEA-----------------------------
9	MUSTER	1w0rA	0.083	0.963	1.584	threading_9	-DPTQYEESSGKCKGGVSVEDCCLNTAFAYQKRSGGLCQPCRSPRWSLWSTWAPLRYRRCVGWNGQCSGKVAPGTLEWQLQACEDQQCCPEMGGWSGWGPWEPCSVTCSKGTRTRRRACNHPAPKCGGHCPGQAQESEACDTQQVCPTHGAWATWGPWTPCSASCHGGPHEPKETRSRKCSAPEPSQKPPGKPCPGLAYEQRRCTGLPPCPVAGGWGPWGPVSPCPVTMEQRTCNHPVPQHGGPFCAGDATRTHICNTAVPCPVDGEWDSWGEWSPCIRRNMKSISCQEIPGQQSRGRTCRGRKFDGHRCAGQQQDIRHCYSIQHCPLKGSWSEWSTWGLCMPPCGPNPTRARQRLCTPLLPKYPPTVSVEGQGEKNVTFWGRPLP----EELQGQKEEKRPCLHVPA---CKDPEEEEL--------
10	SPARKS	1x60a	0.178	0.171	0.676	threading_10	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKKTSSSGLYKVQIGAFKVKANADSLASNAEAKGFDSIVLLKDG--LYKVQIGAFSSKDNADTLAARAKNAILES---------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.424 to 1lslA SCOP code=g.60.1.1	TM-score=0.890 to 1c7oA SCOP code=c.67.1.3	TM-score=0.322 to 1lslA SCOP code=g.60.1.1	TM-score=0.402 to 1b24A SCOP code=d.95.2.1	TM-score=0.559 to 1utaA SCOP code=d.58.52.1