Template-based Modeling Results for DCUR_ECOLI


  Submitted Primary Sequence

>Length 239
MINVLIIDDDAMVAELNRRYVAQIPGFQCCGTASTLEKAKEIIFNSDTPIDLILLDIYMQKENGLDLLPVLHNARCKSDVIVISSAADAATIKDSLHYGVVDYLIKPFQASRFEEALTGWRQKKMALEKHQYYDQAELDQLIHGSSSNEQDPRRLPKGLTPQTLRTLCQWIDAHQDYEFSTDELANEVNISRVSCRKYLIWLVNCHILFTSIHYGVTGRPVYRYRIQAEHYSLLKQYCQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MINVLIIDDDAMVAELNRRYVAQIPGFQCCGTASTLEKAKEIIFNSDTPIDLILLDIYMQKENGLDLLPVLHNARCKSDVIVISSAADAATIKDSLHYGVVDYLIKPFQASRFEEALTGWRQKKMALEKHQYYDQAELDQLIHGSSSNEQDPRRLPKGLTPQTLRTLCQWIDAHQDYEFSTDELANEVNISRVSCRKYLIWLVNCHILFTSIHYGVTGRPVYRYRIQAEHYSLLKQYCQ
CCEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEEEEECCCCHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MINVLIIDDDAMVAELNRRYVAQIPGFQCCGTASTLEKAKEIIFNSDTPIDLILLDIYMQKENGLDLLPVLHNARCKSDVIVISSAADAATIKDSLHYGVVDYLIKPFQASRFEEALTGWRQKKMALEKHQYYDQAELDQLIHGSSSNEQDPRRLPKGLTPQTLRTLCQWIDAHQDYEFSTDELANEVNISRVSCRKYLIWLVNCHILFTSIHYGVTGRPVYRYRIQAEHYSLLKQYCQ
41100001111100200220033132010001022132022002223220000000010143200200110242324010000001211200210021101000011022220120010022212223533223221012002122233332441232122300200020022233230113100320200320023002102423101010211222211110102233221022215
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMINVLIIDDDAMVAELNRRYVAQIPGFQCCGTASTLEKAKEIIFNSDTPIDLILLDIYMQKENGLDLLPVLHNARCKSDVIVISSAADAATIKDSLHYGVVDYLIKPFQASRFEEALTGWRQKKMALEKHQYYDQAELDQLIHGSSSNEQDPRRLPKGLTPQTLRTLCQWIDAHQDYEFSTDELANEVNISRVSCRKYLIWLVNCHILFTSIHYGVTGRPVYRYRIQAEHYSLLKQYCQ
1MUSTER3c3wA0.1690.8661.646threading_1MVKVFLVDDHEVVRRGLVDLLGADPELDVVGEAGSVAEAMARVP--AARPDVAVLDVRLPDGNGIELCRDLLSRMPDLRCLILTSYTSDEAMLDAILAGASGYVVKDIKGMELARAVKDVGAGR------SLLDNRAAAALMAKLRGAAEKQDPLS-GLTDQERTLLGLLSE------LTNKQIADRMFLAEKTVKNYVSRLLAK---------GMERRTQ-VFATE---LKRSR----
2SPARKS3c3wa0.1670.8742.407threading_2MVKVFLVDDHEVVRRGLVDLLGADPELDVVGEAGSVAEAMARVP--AARPDVAVLDVRLPDGNGIELCRDLLSRMPDLRCLILTSYTSDEAMLDAILAGASGYVVKDIKGMELARAVKDVGAGRSL------LDNRAAAALMAKLRGAAEKQDPLS-GLTDQERTLLGLLS-----EGLTNKQIADRMFLAEKTVKNYVSRLLAK--------LGMERRTQVFATELKRSR--------
3PROSPECT21a04a0.2010.8332.312threading_3PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAE--SLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA------GEMVLSEALTPVLAASLERDVNQ-------LTPRERDILKLIA-----QGLPNKMIARRLDITESTVKVHVKHMLK--------------------KMKLKSRVEAAVWVH
4PPA-I1a04A0.2080.8241.728threading_4PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAE--SLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG------EMVLSEALTPVLAASLERDVNQ-------LTPRERDILKLIAQG-----LPNKMIARRLDITESTVKVHVKHMLKKMKLKSRHQERIF----------------------
5HHPRED-l1yio_A0.2000.8161.911threading_5--TVFVVDDDMSVREGLRNLLRS-AGFEVE-TFDCASTFLEHR--RPEQHGCLVLDMRMPGMSGIELQEQLTAISDGIPIVFITAHGDIPMTVRAMKAGAIEFLPKPFEEQALLDAIEQGLQLNAERRQARE-TQDQL--------------EQLFSSLTGREQQ-VLQL----TIRGLMNKQIAGELGIAEVTVKVHRHNIMQK--------LNVRSLA--------NLVHLVEKY--
6HHPRED-g1s8n_A0.1580.7661.623threading_6PRRVLIAEDEALIRMDLAEMLRE-EGYEIVGEAGDGQEAVELAEL--HKPDLVIMDVKMPRRDGIDAASEIASK-RIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSRFREITALATLSERLETRKLVERAK---GLLQTKHGMTEPDFKWIQRA-----------------AMDRRTTMKRVAEVVLET-----------LG---------------------
7SP31a04a0.2060.8542.338threading_7PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAE--SLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG------EMVLSEALTPVLAASLERDVNQ-------LTPRERDILKLIA-----QGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF---------------
8SAM-T991ny5B0.1920.8082.131threading_8-MNVLVIEDDKVFRGLLEEYLSMK-GIK-VESAERGKEAYKLL--SEKHFNVVLLDLLLPDVNGLEILKWIKERSPETEVIVITGHGTIKTAVEAMKMGAYDFLTKPCMLEEIELTINKAIEHRKLRKENE-LLRREKDLKEEEYVFESPKMKEILEKIKKISCAECPVLI---TGESGVGKEVVARL-IHKLSDRSKEPFVA------------------------------------
9MUSTER1a04A0.2100.8371.606threading_9PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAE--SLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG------EMVLSEALTPVLAASLERDVNQ-------LTPRERDILKLIAQ------LPNKMIARRLDITESTVKVHVKHMLKK---------KLKSRVE-VWVHQ---ERIF-----
10SPARKS1a04a0.2080.8242.386threading_10PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAE--SLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA------GEMVLSEALTPVLAASLERDVNQ-------LTPRERDILKLIA-----QGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRHQERIF----------------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.550 to 2tmyA
SCOP code=c.23.1.1
TM-score=0.549 to 1nxwA
SCOP code=c.23.1.1
TM-score=0.551 to 2tmyA
SCOP code=c.23.1.1
TM-score=0.888 to 1a04A
SCOP code=a.4.6.2
TM-score=0.865 to 1a04A
SCOP code=a.4.6.2