Template-based Modeling Results for DHAM_ECOLI

Submitted Primary Sequence

>Length 472
MVNLVIVSHSSRLGEGVGELARQMLMSDSCKIAIAAGIDDPQNPIGTDAVKVMEAIESVADADHVLVMMDMGSALLSAETALELLAPEIAAKVRLCAAPLVEGTLAATVSAASGADIDKVIFDAMHALEAKREQLGLPSSDTEISDTCPAYDEEARSLAVVIKNRNGLHVRPASRLVYTLSTFNADMLLEKNGKCVTPESINQIALLQVRYNDTLRLIAKGPEAEEALIAFRQLAEDNFGETEEVAPPTLRPVPPVSGKAFYYQPVLCTVQAKSTLTVEEEQDRLRQAIDFTLLDLMTLTAKAEASGLDDIAAIFSGHHTLLDDPELLAAASELLQHEHCTAEYAWQQVLKELSQQYQQLDDEYLQARYIDVDDLLHRTLVHLTQTKEELPQFNSPTILLAENIYPSTVLQLDPAVVKGICLSAGSPVSHSALIARELGIGWICQQGEKLYAIQPEETLTLDVKTQRFNRQG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MVNLVIVSHSSRLGEGVGELARQMLMSDSCKIAIAAGIDDPQNPIGTDAVKVMEAIESVADADHVLVMMDMGSALLSAETALELLAPEIAAKVRLCAAPLVEGTLAATVSAASGADIDKVIFDAMHALEAKREQLGLPSSDTEISDTCPAYDEEARSLAVVIKNRNGLHVRPASRLVYTLSTFNADMLLEKNGKCVTPESINQIALLQVRYNDTLRLIAKGPEAEEALIAFRQLAEDNFGETEEVAPPTLRPVPPVSGKAFYYQPVLCTVQAKSTLTVEEEQDRLRQAIDFTLLDLMTLTAKAEASGLDDIAAIFSGHHTLLDDPELLAAASELLQHEHCTAEYAWQQVLKELSQQYQQLDDEYLQARYIDVDDLLHRTLVHLTQTKEELPQFNSPTILLAENIYPSTVLQLDPAVVKGICLSAGSPVSHSALIARELGIGWICQQGEKLYAIQPEETLTLDVKTQRFNRQG
CEEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCHHHHCEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECCEEECHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHCCCHHHEEEEEECCCCCCCHHHHHHHHCCCCEEEECCHHHHHCCCCCEEEEECCCCEEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MVNLVIVSHSSRLGEGVGELARQMLMSDSCKIAIAAGIDDPQNPIGTDAVKVMEAIESVADADHVLVMMDMGSALLSAETALELLAPEIAAKVRLCAAPLVEGTLAATVSAASGADIDKVIFDAMHALEAKREQLGLPSSDTEISDTCPAYDEEARSLAVVIKNRNGLHVRPASRLVYTLSTFNADMLLEKNGKCVTPESINQIALLQVRYNDTLRLIAKGPEAEEALIAFRQLAEDNFGETEEVAPPTLRPVPPVSGKAFYYQPVLCTVQAKSTLTVEEEQDRLRQAIDFTLLDLMTLTAKAEASGLDDIAAIFSGHHTLLDDPELLAAASELLQHEHCTAEYAWQQVLKELSQQYQQLDDEYLQARYIDVDDLLHRTLVHLTQTKEELPQFNSPTILLAENIYPSTVLQLDPAVVKGICLSAGSPVSHSALIARELGIGWICQQGEKLYAIQPEETLTLDVKTQRFNRQG
2100000010230020002002311334202000000021231210100110020022014232000000001000002101210233113201001021110000001211222313200110121012323321222232322321323343121010002032101010001002002213010102222210213000200102032212010002022022002002211322123133212321310110101000122211313242222132112202300220131022002303420332001001000100213300210030033230102100220022003102512131022001102100210022015233322313220000022011110130222001000012213101000002102000001013101213332100011321212344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MVNLVIVSHSSRLGEGVGELARQMLMSDSCKIAIAAGIDDPQNPIGTDAVKVMEAIESVADADHVLVMMDMGSALLSAETALELLAPEIAAKVRLCAAPLVEGTLAATVSAASGADIDKVIFDAMHALEAKREQLGLPSSDTEISDTCPAYDEEARSLAVVIKNRNGLHVRPASRLVYTLSTFNADMLLEKNGKCVTPESINQIALLQVRYNDTLRLIAKGPEAEEALIAFRQLAEDNFGETEEVAPPTLRPVPPVSGKAFYYQPVLCTVQAKSTLTVEEEQDRLRQAIDFTLLDLMTLTAKAEASGLDDIAAIFSGHHTLLDDPELLAAASELLQHEHCTAEYAWQQVLKELSQQYQQLDDEYLQARYIDVDDLLHRTLVHLTQTKEELPQFNSPTILLAENIYPSTVLQLDPAVVKGICLSAGSPVSHSALIARELGIGWICQQGEKLYAIQPEETLTLDVKTQRFNRQG
1	MUSTER	2wqdA1	0.230	0.479	1.428	threading_1	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SKLIKGIAASDGVAIAKAPDLTFDKNEKVTDVEGEVAKFNSAIEASKVELTKIRNNAEVQLGADKAAIFDAHLLVLDDPELIQPIQDKIKNENANAATALTDVTTQFVTIFESMDNEYMKERAADIRDVSKRVLSHILGVELNPSMIDESVVIVGNDLTPSDTAQLNKEFVQGFATNIGGRTSASAIMSRSLEIPAIVGTKSITQEVKQGDMIIVDGLNGDVIVNP
2	SP3	1kbla	0.161	0.936	1.792	threading_2	MRNLL-----GGKGCNLAEMTI-------------LGM-----PIPQGFTVTTEACTEYYNSGKQITQ-EIQDQIFEAITWLEELNGKKFGSVRSGARASMPGMMDTILNLGLNDVAVEGFAKKTGNPRFAYDSYRRFIQMYSDVVMEVPKSHFEKIIDAMKE-EKGVHFDTADDLKELAEKFKAVYKEAMNGEEQEPKDQLMGAVKAVWDNPRAIVRMNDIPGDWGTAVNVQTMVFGNKGETSGTGVARNPSTGEKGIYGEYLINAQGEDVVAGVRTPQPITQLENDMPDCYKQFMDLAMKLEKHFRDMQDMEFEGKLYFLQTPAALQIACDLVDEGMITEEEAVVRIEAKSLDQLLHPTFNPAALKAGEV--IGSALVYFTADEAKAAHEKGERVILVRLETSPEDIEGMHA--AEGILTVRGGMTSHAAVVARGMGTCCVSGCGEIKHTFAEGDYISLDGSTGKIYK-G
3	SPARKS	1kbla	0.167	0.924	1.957	threading_3	MRNLL-----GGKGCNLAEMTI-------------LGM-----PIPQGFTVTTEACTEYYNSGKQITQ-EIQDQIFEAITWLEELNGKKFGSVRSGARASMPGMMDTILNLGLNDVAVEGFAKKTGNPRFAYDSYRRFIQMYSDVVMEVPKSHFEKIIDAMKE-EKGVHFDTADDLKELAEKFKAVYKEAMNGEEQEPKDQLMGAVKAVFR------SWDNPRAIVYRRMNDIPGDWGTAVNVQTMVFGNKGETSGTGVAFTRNPSTGELINAQGEDVVAPITQLENDMPDCYKQFMDLAMKLEKHFRDMQDMEFEGKLYFLQTPAALQIACDLVDEGMITEEEAVVRIEAKSLDQLLHPTFNPAALKAGEV--IGSALVYFTADEAKAAHEKGERVILVRLETSPEDIEGMHA--AEGILTVRGGMTSHAAVVARGMGTCCVSGCGEIKHTFAEGDYISLDGSTGKIYK-G
4	SPARKS	1zyma	0.279	0.470	4.546	threading_4	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGILASPGIAFGKAEIVIDRKKISADQVDQEVERFLSGRAKASAQLETIKTKAGETFGEEKEAIFEGHIMLLEDEELEQEIIALIKDKHMTADAAAHEVIEGQASALEELDDEYLKERAADVRDIGKRLLRNILGLKIDLSAIQDEVILVAADLTPSETAQLNLKKVLGFITDAGGRTSHTSIMARSLELPAIVGTGSVTSQVKNDDYLILDAVNNQVYVNP
5	PROSPECT2	1w25A	0.095	0.824	1.333	threading_5	SARILVVDDIEANVRLLEAKLTA----EYYEVSTA-----------MDGPTALAMAARDLPD---IILLDVMDGFTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESGASDFARVRSLTRFKLVIDELRQREASGRRMGVIAGAAARLDGLGGRVLIVDDNHRPVIESDPEKAKISAGGPVDLVIVNAAAKNFDGLRFTAALRSEERTRQLPVLAMVDPDDRGRMVKALE----------------------IGVNDILSRPID--------------PQELSARVKTQIQRKRYTDYLRNNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRGDPVSHDIGDEVLREFALRLASNVRAIPDTALADALRIAERIRMHVSGSPFTVAHGREMLNVTI---------------SIGVSATAGEGDTPEALLKRA---------DEGVYQAKASG-----RNAVVGKAAH
6	PROSPECT2	1zyma	0.275	0.470	1.976	threading_6	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGILASPGIAFGKDEIVIDRKKISADQVDQEVERFLSGRAKASAQLETIKTKAGETFGEEKEAIFEGHIMLLEDEELEQEIIALIKDKHMTADAAAHEVIEGQASALEELDDEYLKERAADVRDIGKRLLRNILGLKIIDSAIQDEVILVAADLTPSETAQLNLKKVLGFITDAGGRTSHTSIMARSLELPAIVGTGSVTSQVKNDDYLILDAVNNQVYVSE
7	HHPRED-l	3ct6_A	0.279	0.273	3.321	threading_7	TYGIVIVSHSPEIASGLKKLIREVA--KNISLTAIGGLENGE--IGTSFDRVMNAIEENE-ADNLLTFFDLGSARMNLDLVSEMTD-K---ELTIFNVPLIEGAYTASALLEAGATFEAIKEQLEKMLIEKRSHHHHH----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8	PPA-I	2wqdA1	0.230	0.479	2.559	threading_8	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SKLIKGIAASDGVAIAKAPDLTFDKNEKVTDVEGEVAKFNSAIEASKVELTKIRNNAEVQLGADKAAIFDAHLLVLDDPELIQPIQDKIKNENANAATALTDVTTQFVTIFESMDNEYMKERAADIRDVSKRVLSHILGVEPNPSMIDESVVIVGNDLTPSDTAQLNKEFVQGFATNIGGRTSASAIMSRSLEIPAIVGTKSITQEVKQGDMIIVDGLNGDVIVNP
9	HHPRED-l	2hwg_A	0.284	0.470	5.755	threading_9	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ISGILASPGIAFGKALLLKEDEIVIDRKSADQVDQEVERFLSGRAKASAQLETIKTKAGETFGEEKEAIFEGHI-LLEDEELEQEIIALIKDKH-TADAAAHEVIEGQASALEELDDEYLKERAADVRDIGKRLLRNILGLKIILSAIQDEVILVAADLTPSETAQLNLKKVLGFITDAGGRTS-TSI-ARSLELPAIVGTGSVTSQVKNDDYLILDAVNNQVYVN-
10	HHPRED-g	2hwg_A	0.283	0.464	5.210	threading_10	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ISGILASPGIAFGKALLLIVIDRKSADQVDQEVERFLSGRAKASAQLETIKTKAGETFGEEKEAIFEGHI-LLEDEELEQEIIALIKDKH-TADAAAHEVIEGQASALEELDDEYLKERAADVRDIGKRLLRNILGLKIIDSAIQDEVILVAADLTPSETAQLNLKKVLGFITDAGGRTS-TSI-ARSLELPAIVGTGSVTSQVKNDDYLILDAVNNQVYVNP

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.447 to 2hi6A SCOP code=c.8.2.3	TM-score=0.442 to 2hi6A SCOP code=c.8.2.3	TM-score=0.697 to 1kc7A SCOP code=c.1.12.2	TM-score=0.673 to 1kc7A SCOP code=c.1.12.2	TM-score=0.426 to 2hi6A SCOP code=c.8.2.3