Template-based Modeling Results for DPO4_ECOLI


  Submitted Primary Sequence

>Length 351
MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARKFGVRSAMPTGMALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVTDSVHCHGSATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNGQFVITPAEVPAFLQTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVMLLKRFGKFGRILWERSQGIDERDVNSERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERRLAKVKPDLLIARQGVKLKFDDFQQTTQEHVWPRLNKADLIATARKTWDERRGGRGVRLVGLHVTLLDPQMERQLVLGL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARKFGVRSAMPTGMALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVTDSVHCHGSATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNGQFVITPAEVPAFLQTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVMLLKRFGKFGRILWERSQGIDERDVNSERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERRLAKVKPDLLIARQGVKLKFDDFQQTTQEHVWPRLNKADLIATARKTWDERRGGRGVRLVGLHVTLLDPQMERQLVLGL
CCEEEEECCCHHHHHHHHHHCHHHCCCEEEECCCCCCCEEEEECCHHHHHHCCCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCCCCCCEEEECHHHHHHHHHCCCHHHCCCCCHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARKFGVRSAMPTGMALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVTDSVHCHGSATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNGQFVITPAEVPAFLQTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVMLLKRFGKFGRILWERSQGIDERDVNSERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERRLAKVKPDLLIARQGVKLKFDDFQQTTQEHVWPRLNKADLIATARKTWDERRGGRGVRLVGLHVTLLDPQMERQLVLGL
312000000000000011231220331000001243320000001120331103100000101410120000103120022002101300131023010000110000012012122202100220121013204000000002020002001323213000001121012102202022010003200210241102001102402121013101200210011021123331223323311001100233132121012002300220132024233321001000102133131101121124122110020023002333223100000000131333233222224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARKFGVRSAMPTGMALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVTDSVHCHGSATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNGQFVITPAEVPAFLQTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVMLLKRFGKFGRILWERSQGIDERDVNSERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERRLAKVKPDLLIARQGVKLKFDDFQQTTQEHVWPRLNKADLIATARKTWDERRGGRGVRLVGLHVTLLDPQMERQLVLGL
1MUSTER3fdsA0.2870.9833.436threading_1M-IVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIEAKAKYLISLARDEYNEPIRT-RVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDK----RIPKAIHVVAVTEDLDIVSRGRTFPHGSKETAYSESVKLLQKIEDERKIRRIGVRFSKFIEAIGLDKFFDT
2SPARKS3ospa0.2380.9576.090threading_2TYIIFHIDFDCFFATVAYLCRSSSKRDPIVVCHGT-KNSDIASCNYVARSYGIKNGMWVSQAEKMLPNLISLPYTFEQFQLKSEAFYSTLKRLNNLILPISIDEAVCVRII---PDTLNARLCEEIRQEIFQGTGCTVSIGCSDSLVLARLALKMAKPNGYNITFKSNLEEFWSSFKLDDLPGVGHSTLSRLESTSPHSLNDLRKYTLDALKASVSKLGMKIHLALQGQDDEESLKVLQRKSLSIDINWGIRFKNITQVDLFIERGCQYLLEKLNE--INKTTSQITLKLMRGRCDSFSRSSRLGTNEFGIIATEMKSLYRTLGPPMELRGLALQFNKLVDV---------
3PROSPECT23gqcA0.3230.9725.412threading_3QSCIMHVDMDCFFVSVGIRNRPDLKGKPVAVTSNRGTRAEIASCSYEARQLGIKNGMFFGHAKQLCPNLQAVPYDFHAYKEVAQTLYETLASYTHNIEAVSCDEALVDITEILAETKTPDEFANAVRMEIKDQTKCAASVGIGSNILLARMATRKAKPDGQYHLKPEEVDDFIRGQLVTNLPGVGHSMESKLASLGIKTCGDLQYMTMAKLQKEFGKTGQMLYRFCRGLDDRPVRTEKERKSVSAEINYGIRFTQPKEAEAFLLSLSEEIQRRLEA--TGMKGKRLTLKIMVGICDNIARTVTLDQDNAKIIGKAMLNMFHTMKLNSDMRGVGIHVNQLVPTN--------
4PPA-I3fdsA0.2840.9837.038threading_4-MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIEAKAKYLISLARDEYNEPIRT-RVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLD----KRIPKAIHVVAVTEDLDIVSRGRTFPHGSKETAYSESVKLLQKIEDERKIRRIGVRFSKFIEAIGLDKFFDT
5HHPRED-l3gqc_A0.3150.9774.723threading_5QSCIMHVDMDCFFVSVGIRNRPDLKGKPVAVTSNRGTGAEIASCSYEARQLGIKNGMFFGHAKQLCPNLQAVPYDFHAYKEVAQTLYETLASYTHNIEAVSCDEALVDITEILAETKTPDEFANAVRMEIKDQTKCAASVGIGSNILLARMATRKAKPDGQYHLKPEEVDDFIRGQLVTNLPGVGHSMESKLASLGIKTCGDLQYMTMAKLQKEFGPTGQMLYRFCRGLDDRPVRTEKERKSVSAEINYGIRFTQPKEAEAFLLSLSEEIQRRLEATGMKGKRLTLKIMVRKPKFDNRTVTLDQATDNAKIIGKAMLNMFHTMKNISDMRGVGIHVNQLVPTN--------
6HHPRED-g3pzp_A0.3760.9544.142threading_6SNTIVHIDMDAFYAAVEMRDNPELKDKPIAVGS----MSMLSTSNYHARRFGVRAAMPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKHLEEGTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPQAVMDFIKDLPIRKVSGIGKVTEKMLKALGIITCTELYQQ-RALLSLLFSESWHYFLHISLGLGSTHLTRDGERKSMSVERTFSE-INKAEEQYSLCQELCSELAQDLQKE--RLKGRTVTIKLKNVNFEVKTRASTVSSSTAEEIFAIAKELLKTEIHPLRLRLMGVRISSFPNEE--------
7SP33ospa0.2410.9576.342threading_7TYIIFHIDFDCFFATVAYLCRSSSKRDPIVVCHGT-KNSDIASCNYVARSYGIKNGMWVSQAEKMLPNLISLPYTFEQFQLKSEAFYSTLKRLNNLILPISIDEAVCVRIIP---DTLNARLCEEIRQEIFQGTGCTVSIGCSDSLVLARLALKMAKPNGYNITFKSNLEEFWSSFKLDDLPGVGHSTLSRLESTSPHSLNDLRKYTLDALKASVSKLGMKIHLALQGQDDEESLKVLQRKSLSIDINWGIRFKNITQVDLFIERGCQYLLEKLNE--INKTTSQITLKLMRRRCDSFSRSSRLPTNEFGIIATEMKSLYRTLGPPMELRGLALQFNKLVDV---------
8SAM-T992oh2B0.3770.9465.428threading_8-NTIVHIDMDAFYAAVEMRDNPELKDKPIAVGSM----SMLSTSNYHARRFGVRAAMPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKHLEFGTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPQAVMDFIKDLPIRKVSGIGKVTEKMLKALGIITCTELYQQRALLSLLFSETSWHYFLHISLGLGSTHLTRDGERKSMSVERTFSE-INKAEEQYSLCQELCSELAQDLQKE--RLKGRTVTIKLKNVNFEVKTRASTVSSSTAEEIFAIAKELLKTEIHPLRLRLMGVRISSFP-----------
9MUSTER3bq1A0.2960.9543.338threading_9M-IVIFVDFDYFFAQVEEVLNPQYKGKPLVVCGRTKTSGAVATANYEARKLGVKAGMPIIKAMQIAPSAIYVPMRKPIYEAFSNRIMNLLNKHADKIEVASIDEAYLDVTNVEGNFENGIELARKIKQEILEKEKITVTVGVAPNKILAKIIADKSKPNGLGVIRPTEVQDFLNELDIDEIPGIGSVLARRLNELGIQKLRDILSKNYNELEKITGAKALYLLKLAQNKYSEPVEN-KSKIPHGRYLTLPYNTRDVKVILPYLKKAINEAYNKV-----NGIPMRITVIAIMEDLDILSKGKKFKHGSIDNAYKVAEDLLRELDKRRNVRRIGVKLDNIIIN---------
10SPARKS3mr4a0.3040.9665.872threading_10DRVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQKSWKGGGIIAVSYEARAFGVTRSMWADDAKKLCPDLLLAQVNLTKYREASVEVMEIMSRFAV-IERASIDEAYVDLTSPDLQLTVGAVIVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHGSVPQLFSQMPIRKIRSLGKLGASVIEILGIEYMGELTQFTESQLQSHFEKNGSWLYAMCRGIEHDPVKPRQLPKTIGCSKNFPGKLATREQVQWWLLQLAQELEERLTKDRNDRVATQLVVSIRVQGDKRLRRCCALTRYDAHKMSHDAFTVIKNCNIQPPLTMLFLCATKFS-----------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.730 to 3bq1A
SCOP code=d.240.1.1
TM-score=0.729 to 3bq1A
SCOP code=d.240.1.1
TM-score=0.699 to 1t3nA
SCOP code=d.240.1.1
TM-score=0.756 to 1t3nA
SCOP code=d.240.1.1
TM-score=0.727 to 3bq1A
SCOP code=d.240.1.1