Template-based Modeling Results for DJLA_ECOLI


  Submitted Primary Sequence

>Length 271
MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWFANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFRVGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEELGISRAQFDQFLRMMQGGAQFGGGYQQQTGGGNWQQAQRGPTLEDACNVLGVKPTDDATTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWFANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFRVGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEELGISRAQFDQFLRMMQGGAQFGGGYQQQTGGGNWQQAQRGPTLEDACNVLGVKPTDDATTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWFANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFRVGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEELGISRAQFDQFLRMMQGGAQFGGGYQQQTGGGNWQQAQRGPTLEDACNVLGVKPTDDATTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK
3320020000000000100010000000001001212223222223233110100000010002003132311321020012002312132201210110032222332203210210121021123002100100010011112122312100110032120232102201310200131222233322223233134222230002112033123221013001200231011312142113301320331022023012103333324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWFANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFRVGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEELGISRAQFDQFLRMMQGGAQFGGGYQQQTGGGNWQQAQRGPTLEDACNVLGVKPTDDATTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK
1SPARKS1wjza0.3050.3032.016threading_1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSSGSSGMALEQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSA-DVPAGTMEECMQKFIEIDQAWKILGNEETKK
2PROSPECT22fozA0.0860.9891.168threading_2MASLSRFRGCLAGALLGDCVGSFYEAHDTVDLTSVLRHVQSLEPDPEALYYTDDTAMARALVQSLLAKEAFDEVDMAHRFAQEYKKDPDRGYGAGVVTVFKKLLNPKCRDVFEPARAGISLAYSSVQDVQILQALAVHLALQGESSSEHFLKQLLGHMEDLEGDAQSVLDYSSRLKKIGELLDQASVTREEVVSELGNGIAAFESVPTAIDPEIPSAFNSLQRTLIYSIS--LGGYYGMDQVPESWQQSCEGY-EETDILAQSLHRVFQKS
3SP31wjza0.3050.3032.004threading_3--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSSGSSGMALEQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSAD-VPAGTMEECMQKFIEIDQAWKILGNEETKK
4HHPRED-l2jxu_A0.1630.5202.661threading_4-----------------------------MSFFDKVKGALTSGREVGRYKNKKFMQGTVAVCARIAVASDGVSSEEKQKMIGFLRSSELKVFDTAEVIEFFNKLV-TSFDFDLTMKYILA-LKDQPEAAQLALRVGIAVAKSDGNFDDDEKSAVREIARSLGFDPAEFGLLE---------------------------------------------------------------------------------------------------
5SAM-T992dmxA0.3590.2362.526threading_5--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKN------PDNKEEAEKKFKLVSEAYEVLSDSKKR-
6HHPRED-g2ou3_A0.1810.5722.197threading_6-SDIKKL-----------------GSSWIINFF--GFNQI-----PTNEDSS----IY-KSVLTCAKADGVISPEEKDWALGFCASWGVADWVIEDLKT-----YEADEALEEVIARSPQVS-AQRD----ILLSAIWVSAADGELHEKEKAKIRK-ATILGIKEEIVDQLEQLYYYEAALRQKRLNL----LYPQK-SP------Y----------------------------------------------------------------
7SPARKS2dmxa0.3140.2581.924threading_7---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSSGSSGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNK------EEAEKKFKLVSEAYEVLSDSKKRS
8PROSPECT23a0oA30.0880.9631.157threading_8HCGWAEFYEKSVEPWLERPVIYAIRHLAIAGRVLAVAAWDTKGATSRAYNDEAGFRVVVALAWGYDWLYDHLSEDERRTVRSVLLER-----TREVADHVIAHARIHVFPLSAVLTPACIALQGESDEAGEWLDYTVEFLATLYSPWAYLIEAANLIRSYIGYDLYQRPFFQNTGRFPLYTKAPGTRRANFGDDSTLGDLPGLKLGYNVRQFAGVTGNGHYQWYFDHIKADATG-----TEMAFYNYGWWDLNFDDLVYRHDYAVSPADLP
9SP32ys8a0.2790.3171.887threading_9-----------------------------------------------------------------------------------------------------------------------------------------------GSSGSSGSSA--------SFTKEQADAIRRIR--------------------------NSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPG--------SEDAFKAVVNARTALLKNIKSG
10HHPRED-l2ou3_A0.1920.5762.415threading_10-SDIKK-LGS---------------SWIINWFF--GFNQIP------TNED---SSIY-KSVLTCAKADGVISPEEKDWALGFCASWGVADWVIEDLKT-----YEADEALEEVIARSPQVS-A----QRDILLSAIWVSAADGELHEKEKAKIRK-ATILGIKEEIVDQLEQLYYYEAALRQ------------------------------------------KRLNL-LYPQKSPY--------------------------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.510 to 1wjzA
SCOP code=a.2.3.1
TM-score=0.720 to 1t5jA
SCOP code=a.209.1.1
TM-score=0.513 to 1wjzA
SCOP code=a.2.3.1
TM-score=0.386 to 1eo0A
SCOP code=a.48.3.1
TM-score=0.404 to 1fpoA
SCOP code=a.2.3.1