Template-based Modeling Results for DSDX_ECOLI

Submitted Primary Sequence

>Length 445
MHSQIWVVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGTMMGMGPLDMVNAIESGIGGTLGFLAAVIGLGTILGKMMEVSGAAERIGLTLQRCRWLSVDVIMVLVGLICGITLFVEVGVVLLIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPPHPAALYVANKLGADIGSVIVYGLLVGLMASLIGGPLFLKFLGQRLPFKPVPTEFADLKVRDEKTLPSLGATLFTILLPIALMLVKTIAELNMARESGLYILVEFIGNPITAMFIAVFVAYYVLGIRQHMSMGTMLTHTENGFGSIANILLIIGAGGAFNAILKSSSLADTLAVILSNMHMHPILLAWLVALILHAAVGSATVAMMGATAIVAPMLPLYPDISPEIIAIAIGSGAIGCTIVTDSLFWLVKQYCGATLNETFKYYTTATFIASVVALAGTFLLSFII
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MHSQIWVVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGTMMGMGPLDMVNAIESGIGGTLGFLAAVIGLGTILGKMMEVSGAAERIGLTLQRCRWLSVDVIMVLVGLICGITLFVEVGVVLLIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPPHPAALYVANKLGADIGSVIVYGLLVGLMASLIGGPLFLKFLGQRLPFKPVPTEFADLKVRDEKTLPSLGATLFTILLPIALMLVKTIAELNMARESGLYILVEFIGNPITAMFIAVFVAYYVLGIRQHMSMGTMLTHTENGFGSIANILLIIGAGGAFNAILKSSSLADTLAVILSNMHMHPILLAWLVALILHAAVGSATVAMMGATAIVAPMLPLYPDISPEIIAIAIGSGAIGCTIVTDSLFWLVKQYCGATLNETFKYYTTATFIASVVALAGTFLLSFII
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEECCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MHSQIWVVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGTMMGMGPLDMVNAIESGIGGTLGFLAAVIGLGTILGKMMEVSGAAERIGLTLQRCRWLSVDVIMVLVGLICGITLFVEVGVVLLIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPPHPAALYVANKLGADIGSVIVYGLLVGLMASLIGGPLFLKFLGQRLPFKPVPTEFADLKVRDEKTLPSLGATLFTILLPIALMLVKTIAELNMARESGLYILVEFIGNPITAMFIAVFVAYYVLGIRQHMSMGTMLTHTENGFGSIANILLIIGAGGAFNAILKSSSLADTLAVILSNMHMHPILLAWLVALILHAAVGSATVAMMGATAIVAPMLPLYPDISPEIIAIAIGSGAIGCTIVTDSLFWLVKQYCGATLNETFKYYTTATFIASVVALAGTFLLSFII
5432101000000000000000010100000000000000000121202200200121011000100000000000020022010012002101303211020001000000000000100000001001100331311001000000000000000011110010003301021000000000000000000000002001331224212221232324333212210210000000000100200030212432001100200121000000000000000013332202101210220011000000000001001200320201200010022120000000000000000011000000000000001012212300010000000000000000001100002200102132002011000000000000000001112
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MHSQIWVVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGTMMGMGPLDMVNAIESGIGGTLGFLAAVIGLGTILGKMMEVSGAAERIGLTLQRCRWLSVDVIMVLVGLICGITLFVEVGVVLLIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPPHPAALYVANKLGADIGSVIVYGLLVGLMASLIGGPLFLKFLGQRLPFKPVPTEFADLKVRDEKTLPSLGATLFTILLPIALMLVKTIAELNMARESGLYILVEFIGNPITAMFIAVFVAYYVLGIRQHMSMGTMLTHTENGFGSIANILLIIGAGGAFNAILKSSSLADTLAVILSNMHMHPILLAWLVALILHAAVGSATVAMMGATAIVAPMLPLYPDISPEIIAIAIGSGAIGCTIVTDSLFWLVKQYCGATLNETFKYYTTATFIASVVALAGTFLLSFII
1	PROSPECT2	1jdha	0.089	0.937	2.178	threading_1	NDEDQVVVNKAAVMVHMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMSVLFYAITTLHNLLLHQEGAKMAVRLVALLNKTNVKFLAITTDCLQILQESKLIILAGPQALVNIMRTYTYEKLLWTTSRVLKVL-------SVCSSNKPAIVEAG-------GMQALGLQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGV--------------LCELAQDKEAAEAIEAEGATAPLTELLHTYAAAVLFRMS
2	PPA-I	3zuxA	0.161	0.670	1.265	threading_2	-------------------------------------------------NILSKISSFIGKTFSLWAALFAAAAFFPDTFKWAGPYIPWLLGIIMFGTLKPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLPAEIAVGVILVGCC------PGGTASNVMTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLAGEMLEIQAAGMLM---------------SIVKMVLLPIVLGLIVHKVL-----GSKTEKLTDAL--PLVSVAAIVLIIGAVVGAS----KGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKALTIEVGMQNSGLAAALAAAHFAVPGALFSVWHNISGSLLATYWAAKA------------------------------------------------------------------
3	PROSPECT2	1ejlI	0.106	0.867	2.015	threading_3	NSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFES-------AWALTNIASGTSEQTKAVVDGGAIPAFISLL---ASPHAHISEQAVWALGNIAGDGSAFRDLVIKAIDPLLALLAVPDLGYLRNLTWTLSNLCRNKNPAPPLDAVVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVK-----------------------KGVVPQLVKLLLPIVTPALRAIGNIVTGTDEQTQKVIDA---GALAVFPSL----------LTNPKTNIQKEA------TWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLG-------ETEKLSIMIEECGGLDKIEALQRASLNLIEKYFS
4	PPA-I	3dh4A	0.101	0.933	1.182	threading_4	AIASYEWMSAITLIIVGKYFLPIFIEKG----IYTIPEFVEKRFN-KKLKTILAVFWISLYIFVNLTSVLYLGGLALETILGIPLMYSILGLALFAL---VYSIVV----WTDVIQVFFLVLGGFMTTYMAVSFIGGTDGWFAGVSKMVDAAPGHFEMILDQSWVANLYYWGFNQKGIVFAAFLKLIVPFLVVLPGIAAYVITSDPQLMASLGDIAATNLPSAANADKAYPWLTQFLPVGVKGVVFAALA-----AAIVSSLASM---LNSTATIFTMDIYKEYISPDSGDHKLVNVGRTAAVVALIIACLIAP------MLGGIGQAFQYIQEYTGLVSPGILAVFLLGLFWKTTSKGAIIGVVASIPFALFLKFMPLSMPLYTLLFTMVVIAFTSNDDDPKGISVTSSMFVTDRSFNIAAYGIMIVLAVLYTLFWVLYK----
5	PROSPECT2	1ee4a	0.087	0.883	2.008	threading_5	NSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEA-------AWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRD-YVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALYSMDTETLVDACWAISYLSDGPQEAIQAVID-----------------------VRIPKRLVELLTLVQTPALRAVGNIVTGNDLQTQVVIN---AGVLPALRLLL----------SSPKENIKKEA------CWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAETKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEA--DKEARGLNINENADFIEKAGGMEKIFNCIYEKAYKIIETYF
6	PPA-I	1xm9A	0.081	0.863	1.178	threading_6	SSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPN------QNVQQAAAGALRNLVF---RSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSKEELIADALPVLADRVIIPFSGWCVVDPEVFFNATGCLRNLS-----SADAGRQTMRNYSGLIDSLMAYVQNCVAASVENCMCVLHNLSYRLDAEVPRQLEYNALPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLK------EKGLPQIARLLSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNSEDILSSACYTVRNLMASPQLAKQYFSSSMLNNIINLCSSASPKAAEAARLLLSDMWSSLQGVL-----------------------------------------
7	PROSPECT2	1b3ua	0.080	0.982	1.986	threading_7	IYDEDEVLLALAEQLYVHCLLPPLESLETVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAGGFTSRTSACGLFSVCYPRVSSAAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPEDKSWTELQKAVGPEITKTDLVPAFQNLMVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIE-HLLPLFLAQLKDECPEVRLNIISNLDCVNEV--IGIRQLSQSLLPAIVELAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWA----HATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITKSLQKIGPILDNSTLQS-EVKPILEKLVKYFAQEALTVLS
8	PPA-I	1wa5B	0.077	0.899	1.141	threading_8	NSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASG-------TSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTL----------VQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITA---GNTEQIQAVIDANLIPPLVKLLEVAECWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIANRIIEVTLDALENILKMGEADKEARGLNINENADFIEKAGGMEKIFNCQQNEN-------------------------DKIYEKAYKIIETYFG
9	PROSPECT2	3a6pA1	0.067	0.908	1.882	threading_9	AMDQVNALCEQLVKAVTVMMQRYRLEALKFCEEFKEK-------CPICVPCGLRLAEKTQVAIVRHFGLQILEHVVKFRWNGMSRLEKVMELIANGTLNILEEENHIKDALSRI-----VVEMIKREMLIELDTLSKQGETQTELVMFILLRLAEDVVTFQTLPPQRRRDIQQTLTQNMERIFSFLLNTLQENVNKYQQV-----------------------KTDTSQESKAQANCRVGVAALNTLMSHITAENCKLLEILCLLEQELQLGAAECLLIAV----SRKGKLEDRKPLMVLFGDVAMHYILHYVFLKRLCQVLCA--LGNQLCALLGADSDVETNFGKYLESFLAFTTHPSQFLRSSTQMTWGALFRHEILSRDPLLASMTNLVKMGFPSKTDSPSCEYSRFDFDSDEDFNAFFNQGEVMRLACRLDPKTSFQMAG
10	PPA-I	2jdqB	0.098	0.852	1.126	threading_10	-----------------------------------------------TSDMIEMIFSKSPEQQLSATQKFRKLLSIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAG-----DSTMCRDYVLDCNILPPLLQLFSKQLTMTRNAVWALSNLCR------------GKSPPPEFAKVSPCLNVLSWLLTDVLADACWALSYLSDGPNGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQLQSLLHLLESIKKEACWTISNITAGRAQIQTVIDANIFPALISILQTAEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEA--KRNGTGINPYCALIEEAYGLDKIEFLQSHENQEIYQKAF

Predicted Tertiary Structure


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TM-score=0.569 to 2q6hA SCOP code=f.54.1.1	TM-score=0.669 to 1wa5B SCOP code=a.118.1.1	TM-score=0.421 to 2r2vA SCOP code=h.1.3.1	TM-score=0.898 to 1kpkA SCOP code=f.20.1.1	TM-score=0.809 to 1ialA SCOP code=a.118.1.1