Template-based Modeling Results for FEAR_ECOLI


  Submitted Primary Sequence

>Length 301
MNPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCEEEEEEEECCEEEEECHHHHCCCCCCEEEEEEEECCEEEEEECCEEEEECCCEEEEECCCCCEEEEECCCCEEEEEEECHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MNPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR
5431233113200200030002121312233020001000021010010101101011123203123211000000021201021341202012010000102210001023202000000122002210233321013203221200200120022013222123210200020000001101233322423233102100100141043320202100120100120012002332110120011100200021033123322000001301121111001001421311122125325
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMNPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR
1MUSTER3gbgA0.1440.8311.798threading_1----------------------------------------KKSFQTNVYRMSKDTYIFNNLYI-----NDYKMFWIDSGIAKLIDKNVSYEINSSSIILLKKNSIQRFSLTENINVSVITISDSFIRSLKSYILNKDLLLWNCEHNDIAVLSEVVNGF-REINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLD--AMEKISCLVKSDITRN-WRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGE--FKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLT
2SPARKS3gbga0.1430.8343.104threading_2----------------------------------------KKSFQTNVYRMSKFDTYI----FNNLYINDYKMFWIDSGIAKLIDKLVSYEINSSSIILLKKNSIQRFSLTENINVSVITISDSFIRSLKSYILGNKDLLWNCEHNDIAVLSEVVNGF-REINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLD--AMEKISCLVKSDITRN-WRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTG--EFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLT
3PROSPECT23gbgA0.1390.8372.867threading_3----------------------------KKSFQTNVYRMSKFDTYIFNNLY----------------INDYKMFWIDSGIAKLIDKNVSYEINSSSIILLKKNSIQRFSLDENINVSVITISDSFIRSLKSYILGNKDLLLWNCEHNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEK--KYNSIFITDDLDAMEKISCLVKSDITRN-WRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTG--EFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLT
4PPA-I3gbgA0.1470.8372.136threading_4----------------------------------------KKSFQTNVYRMSKFDTYI----FNNLYINDYKMFWIDSGIAKLIDCLVSYEINSSSIILLKKNSIQRFSLTENINVSVITISDSFIRSLKSYILGNKDLLLWNCEHNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLD--AMEKISCLVKSDITRN-WRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGE--FKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLT
5HHPRED-l3gbg_A0.1540.8173.968threading_5------------------------------K----------KSFQTNVYRMSKFDTYI----FNNLYINDYKMFWIDSGIAK-LIDKVSYEINSSSIILLKKNSIQRFSLDENINVSVITISDSFIRSLKSYILG---DLLNCEHNDIAVLSEVVNGFREIN-YSDEFLKVFFSGFFSKVEKKYNS--IFITDDLDAMEKISCLVKSDITR-NWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKT--GEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFML-
6HHPRED-g3gbg_A0.1630.7943.754threading_6------------------------------------------KKSFQTNVYDTYIFNN-------LYINDYKMFWIDSGIAK-LIDKVSYEINSSSIILLKKNSIQRFSLDENINVSVITISDSFIRSLKSYI-----DLLNCEHNDIAVLSEVVNGFREI-NYSD---EFLKVFFSGFFSKVEKKYNIFITDDLDAMEKISCLVKSDITR-NWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTG--EFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLT
7SP33gbga0.1430.8342.970threading_7----------------------------------------KKSFQTNVYRMSKF----DTYIFNNLYINDYKMFWIDSGIAKLIDKNVSYEINSSSIILLKKNSIQRFSLTENINVSVITISDSFIRSLKSYILGNKDLLWNCEHNDIAVLSEVVNGF-REINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLD--AMEKISCLVKSDITRN-WRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTG--EFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLT
8SAM-T993oioA0.3260.3062.637threading_8------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LEANIEEP-LSTDDIAYYVGVSRRQLERLFKQYGTVPSKYYLELRLNRARQLLQQT--SKSIVQIGLACGFSSGPHFSSTYRNHFNITPREERAQ--
9MUSTER2k9sA0.2260.3520.936threading_9-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQGISVLSWREDQRISQAKLLLSTT--RMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCE
10SPARKS2k9sa0.2260.3521.974threading_10-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQGISVLSWREDQRISQAKLLLSTT--RMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCE

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.467 to 1xjaC
SCOP code=b.82.4.1
TM-score=0.471 to 1d5yA
SCOP code=a.4.1.8
TM-score=0.474 to 1d5yA
SCOP code=a.4.1.8
TM-score=0.472 to 1xjaC
SCOP code=b.82.4.1
TM-score=0.469 to 1xjaC
SCOP code=b.82.4.1