Template-based Modeling Results for DYR_ECOLI

Submitted Primary Sequence

>Length 159
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
CEEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCEEEEEECCCCCCCCCEEECCHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCHHHCEEEEEEECCCCCCCCCCEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
200000001122000132200020221011013101210000012003101320222200000122223330110210210021024221000000030022002302100001010212010201302332011011221333333212000110234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
1	MUSTER	2d0kA	0.956	1.000	4.482	threading_1	AISLIAALAVDRVIGNENALPWNLPADLAWFKRNTLNKPVIYGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAAAGDVPEIFVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYSFEILERR
2	SPARKS	3ix9a	0.346	1.000	4.594	threading_2	KIVAIWAQDEEGVIGKDNRLPWYLPAELQHFKETTLNHAILMGRVTFDGMGRLLPKRETLILTRNPEEKDGVATFHDVQSVLDWYSAEKNLYIVGGKQIFQAFEPYLDEVIVTHIHARVEGDTYFPEFDLSLFETVSSKFYTKDEKNPYDFTIQYRKRK
3	PROSPECT2	3tq8A	0.427	0.987	4.023	threading_3	MITLIAAMDKNRLIGRNNELPWHLPADLAHFKSITLGKPIVMGRRTFDSIGKPLPHRRNIVITQQKNLIEGCDIFYSLDDALSALTKEPEVIIIGGARIFKEALPKADKMILTIINHSFEGDVYFPEWNDKEWKITSQIKH--ERDNPYPFQFLELRRL
4	PPA-I	2d0kA	0.956	1.000	4.730	threading_4	AISLIAALAVDRVIGNENALPWNLPADLAWFKRNTLNKPVIYGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAAAGDVPEIFVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYSFEILERR
5	HHPRED-l	1zdr_A	0.392	0.994	3.441	threading_5	MISHIVAMDENRVIGKDNRLPWHLPADLAYFKRVTMGHAIVMGRKTFEAIGRPLPGRDNVVVTGNRSFREGCLVLHSLEEVKQWISRADEVFIIGGAELFRATMPIVDRLYVTKIFASFPGDTFYPPISDDEWEIVSYTPGGKDEKNPYEHAFIIYER-
6	HHPRED-g	1zdr_A	0.390	1.000	2.944	threading_6	MISHIVAMDENRVIGKDNRLPWHLPADLAYFKRVTMGHAIVMGRKTFEAIGRPLPGRDNVVVTGNRSFPEGCLVLHSLEEVKQWISRADEVFIIGGAELFRATMPIVDRLYVTKIFASFPGDTFYPPISDDEWEIVSYTPGGKDEKNPYEHAFIIYERK
7	SP3	3ix9a	0.346	1.000	4.531	threading_7	KIVAIWAQDEEGVIGKDNRLPWYLPAELQHFKETTLNHAILMGRVTFDGMGRLLPKRETLILTRNPEEKDGVATFHDVQSVLDWYSAEKNLYIVGGKQIFQAFEPYLDEVIVTHIHARVEGDTYFPEFDLSLFETVSSKFYTKDEKNPYDFTIQYRKRK
8	SAM-T99	3fl8A	0.396	1.000	3.896	threading_8	IVSFMVAMDENRVIGKDNNLPWRLPSELQYVKKTTMGHPLIMGRKNYEAIGRPLPGRRNIIVTRNEGYVEGCEVAHSVEEVFELCKNEEEIFIFGGAQIYDLFLPYVDKLYITKIHHAFEGDTFFPEMDMTNWKEVFVEKGLTDEKNPYTYYYHVYEKQ
9	MUSTER	3ia4A	0.547	1.000	4.316	threading_9	IVSMIAALANNRVIGLDNKMPWHLPAELQLFKRATLGKPIVMGRNTFESIGRPLPGRLNIVLSRQTDYPEGVTVVATLEDAVVAAGDVEELMIIGGATIYNQCLAAADRLYLTHIELTTEGDTWFPDYEQYNWQEIEHESYAADDKNPHNYRFSLLERV
10	SPARKS	1ra9_	0.994	1.000	4.511	threading_10	MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLDKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR

Predicted Tertiary Structure


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TM-score=0.828 to 1cz3B TM-score=0.964 to native SCOP code=c.71.1.1	TM-score=0.825 to 1cz3B TM-score=0.962 to native SCOP code=c.71.1.1	TM-score=0.867 to 2hqpA TM-score=0.903 to native SCOP code=c.71.1.1	TM-score=0.863 to 2hqpA TM-score=0.912 to native SCOP code=c.71.1.1	TM-score=0.828 to 1cz3B TM-score=0.964 to native SCOP code=c.71.1.1

Experimental Structure

Download 1ddrA

SCOP code=c.71.1.1