Template-based Modeling Results for PTFBC_ECOLI

Submitted Primary Sequence

>Length 563
MKTLLIIDANLGQARAYMAKTLLGAAARKAKLEIIDNPNDAEMAIVLGDSIPNDSALNGKNVWLGDISRAVAHPELFLSEAKGHAKPYTAPVAATAPVAASGPKRVVAVTACPTGVAHTFMAAEAIETEAKKRGWWVKVETRGSVGAGNAITPEEVAAADLVIVAADIEVDLAKFAGKPMYRTSTGLALKKTAQELDKAVAEATPYEPAGKAQTATTESKKESAGAYRHLLTGVSYMLPMVVAGGLCIALSFAFGIEAFKEPGTLAAALMQIGGGSAFALMVPVLAGYIAFSIADRPGLTPGLIGGMLAVSTGSGFIGGIIAGFLAGYIAKLISTQLKLPQSMEALKPILIIPLISSLVVGLAMIYLIGKPVAGILEGLTHWLQTMGTANAVLLGAILGGMMCTDMGGPVNKAAYAFGVGLLSTQTYGPMAAIMAAGMVPPLAMGLATMVARRKFDKAQQEGGKAALVLGLCFISEGAIPFAARDPMRVLPCCIVGGALTGAISMAIGAKLMAPHGGLFVLLIPGAITPVLGYLVAIIAGTLVAGLAYAFLKRPEVDAVAKAA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKTLLIIDANLGQARAYMAKTLLGAAARKAKLEIIDNPNDAEMAIVLGDSIPNDSALNGKNVWLGDISRAVAHPELFLSEAKGHAKPYTAPVAATAPVAASGPKRVVAVTACPTGVAHTFMAAEAIETEAKKRGWWVKVETRGSVGAGNAITPEEVAAADLVIVAADIEVDLAKFAGKPMYRTSTGLALKKTAQELDKAVAEATPYEPAGKAQTATTESKKESAGAYRHLLTGVSYMLPMVVAGGLCIALSFAFGIEAFKEPGTLAAALMQIGGGSAFALMVPVLAGYIAFSIADRPGLTPGLIGGMLAVSTGSGFIGGIIAGFLAGYIAKLISTQLKLPQSMEALKPILIIPLISSLVVGLAMIYLIGKPVAGILEGLTHWLQTMGTANAVLLGAILGGMMCTDMGGPVNKAAYAFGVGLLSTQTYGPMAAIMAAGMVPPLAMGLATMVARRKFDKAQQEGGKAALVLGLCFISEGAIPFAARDPMRVLPCCIVGGALTGAISMAIGAKLMAPHGGLFVLLIPGAITPVLGYLVAIIAGTLVAGLAYAFLKRPEVDAVAKAA
CCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHCCCCCEECCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHCCEEEEEECCCCCHHHHCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKTLLIIDANLGQARAYMAKTLLGAAARKAKLEIIDNPNDAEMAIVLGDSIPNDSALNGKNVWLGDISRAVAHPELFLSEAKGHAKPYTAPVAATAPVAASGPKRVVAVTACPTGVAHTFMAAEAIETEAKKRGWWVKVETRGSVGAGNAITPEEVAAADLVIVAADIEVDLAKFAGKPMYRTSTGLALKKTAQELDKAVAEATPYEPAGKAQTATTESKKESAGAYRHLLTGVSYMLPMVVAGGLCIALSFAFGIEAFKEPGTLAAALMQIGGGSAFALMVPVLAGYIAFSIADRPGLTPGLIGGMLAVSTGSGFIGGIIAGFLAGYIAKLISTQLKLPQSMEALKPILIIPLISSLVVGLAMIYLIGKPVAGILEGLTHWLQTMGTANAVLLGAILGGMMCTDMGGPVNKAAYAFGVGLLSTQTYGPMAAIMAAGMVPPLAMGLATMVARRKFDKAQQEGGKAALVLGLCFISEGAIPFAARDPMRVLPCCIVGGALTGAISMAIGAKLMAPHGGLFVLLIPGAITPVLGYLVAIIAGTLVAGLAYAFLKRPEVDAVAKAA
33000001021020101001100010045150302331330100000012122221021220110202201222310211021323322222222232222222100000001000000000021012104533120201022122021201231023010000001130212212312001010120033012002201321222332232322223244321110220110002000100000000011111113214321210010021000000000000000000110022200000000000011100000000000000000020012213013103303211111010010101122221130000002001200331221100000000000000111010010010000000123210100000000000110000000014321332113001000000000002000000031102000000000000000000000302011000000000011120000000000000000000100233322222325
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKTLLIIDANLGQARAYMAKTLLGAAARKAKLEIIDNPNDAEMAIVLGDSIPNDSALNGKNVWLGDISRAVAHPELFLSEAKGHAKPYTAPVAATAPVAASGPKRVVAVTACPTGVAHTFMAAEAIETEAKKRGWWVKVETRGSVGAGNAITPEEVAAADLVIVAADIEVDLAKFAGKPMYRTSTGLALKKTAQELDKAVAEATPYEPAGKAQTATTESKKESAGAYRHLLTGVSYMLPMVVAGGLCIALSFAFGIEAFKEPGTLAAALMQIGGGSAFALMVPVLAGYIAFSIADRPGLTPGLIGGMLAVSTGSGFIGGIIAGFLAGYIAKLISTQLKLPQSMEALKPILIIPLISSLVVGLAMIYLIGKPVAGILEGLTHWLQTMGTANAVLLGAILGGMMCTDMGGPVNKAAYAFGVGLLSTQTYGPMAAIMAAGMVPPLAMGLATMVARRKFDKAQQEGGKAALVLGLCFISEGAIPFAARDPMRVLPCCIVGGALTGAISMAIGAKLMAPHGGLFVLLIPGAITPVLGYLVAIIAGTLVAGLAYAFLKRPEVDAVAKAA
1	MUSTER	1b3uA	0.130	0.902	0.834	threading_1	IAVLIDELRNEDVQLRLNSIKKLSTIALALGVERT------------------RSE------LLPFLTDTIYDEDEVLLALAEQ--GTFTTLVGGPEYVHCLLPPLESLATVEE-TVVRDKAVESLRAISHE------------------HSPSDLEAHPLVKRLAGGDWFTSRTS-SVCYPRVSSAVKAELRQYFRNLCSDDTPMVRRAAASKLGE-KVLELDNVKSEIIPMFSNLADSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAESWRVRYMVADKFTELQKAVGPEI-TKTDLVPAFQNLMKDCAEVRAAASHKVKEFCENLCRENVIMSQILPCIKELVSDAVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVN-G-QLSQSLLPAIVELAEDAKWRVRLAIIEYMFFDEKLNSLCMAWLVDH-VYAIREAATSNLKKLVEKFGEWAIPKVLANYLHRMTTLFCINVLSEVCGQDITTKHMLPT----VLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLT
2	SPARKS	2kyra	0.318	0.190	2.937	threading_2	-----------------------------------------------------------------------------------------------------MSKKLIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATIIIHSVAVTPDNERFESRDVYEITLQDAIKNAAGIIKEIEEMIASEQQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3	PROSPECT2	1qgra	0.115	1.000	1.857	threading_3	MELITILEKSPDRLELEAAQKFLERAAVENLPTLANPGNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLHTLGTETYRPSSAVNQWPELINVTNPNSTEHMKESTLEAIGYICQDIDPEIQGMRKEEPSTQCPDTRVRVAALQNLVKIMSLYYQYETYMGPALFAINVCDEEMDLAIEASEAAEQGRPPEHTSKFTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGPSQLKPLVIQAMPTLIEPEAAINDVYLAPLLQCLIEGLSAEPRVASNVCWAFSSLAEAAYEAADVADDQEEPATYCLSSSFELIVQKLLETTDRPDGHRSSAYESLMEIVKNSAKDCYPAVQKTTLVIMERMFSGGVQEDALMAVSTLLKNYAEYQVCLAAVGLVCDEVMQLLLENLGNENVHRSVKPQILSVFGDIALAIGGEFKKYLEVDMVDYLNELRESCLEATGIVQGLKGDQENVHPFIDHIAGDEDHTDGVVACAAGLIGDLCTAVLKLVEARPMIHELLTEA
4	PPA-I	2kyrA	0.318	0.190	2.107	threading_4	-----------------------------------------------------------------------------------------------------MSKKLIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATIIIHSVAVTPDNERFESRDVYEITLQDAIKNAAGIIKEIEEMIASEQQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5	HHPRED-l	2kyr_A	0.318	0.190	5.396	threading_5	-----------------------------------------------------------------------------------------------------MSKKLIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATIIIHSVAVTPDNERFESRDVYEITLQDAIKNAAGIIKEIEEMIASEQQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6	HHPRED-g	2r48_A	0.356	0.185	4.461	threading_6	------------------------------------------------------------------------------------------------------NAKLLAITSCPNGIAHTY-AAENLQKAADRLGVSIKVETQGGIGVENKLTEEEIREADAIIIAADRSVNKDRFIGKKLLSVGVQDGIRKPEELIQKALNGDIPVY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7	SP3	2kyra	0.318	0.190	2.764	threading_7	-----------------------------------------------------------------------------------------------------MSKKLIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATIIIHSVAVTPDNERFESRDVYEITLQDAIKNAAGIIKEIEEMIASEQQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8	SAM-T99	2r48A	0.356	0.185	5.153	threading_8	------------------------------------------------------------------------------------------------------NAKLLAITSCPNGIAHTY-AAENLQKAADRLGVSIKVETQGGIGVENKLTEEEIREADAIIIAADRSVNKDRFIGKKLLSVGVQDGIRKPEELIQKALNGDIPVY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9	MUSTER	2vvmA	0.123	0.780	0.750	threading_9	----------------------------------------------------------------------MTSRDGYQWTPETGLTQGVPSLGVISPPTNIGPWDVIVIGGGYCGLTATRDLTVALE-ARDRIG-GYPYEMGGTVHWHQSHVWREITRYKMLSPSFNFSRGVNHFNPTTSTYMTHEAEDELLRSALHKFTNVDGTNGRTVLPFPHDMFYVPEDEMSYSERIDQIRDELSLNERSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYT----YQGCMDCLMSYKFKDGQSFARRFWEEAAGTGRLGYVFGCPVRSVVNE----AARVTARDGREFVAKRVVCTIPL------NVLSTIQFSPALS---TERISAMQAGHVSMCTKVHAEV-MRSWTGIAYPFNKLCYAIGDGTTPAGNTHLVCFGNSANHIQPETLKAVGQLAPGTFGVKR-----------LVFHNWVKDEFA-KGAWFFSR--------PGMVSECLQG-LREKHGGVVFANSDWALGWR---------SFIDGAIEEGT----RAARVVLEE
10	SPARKS	2r48a	0.356	0.185	2.829	threading_10	------------------------------------------------------------------------------------------------------NAKLLAITSCPNGIAHTY-AAENLQKAADRLGVSIKVETQGGIGVENKLTEEEIREADAIIIAADRSVNKDRFIGKKLLSVGVQDGIRKPEELIQKALNGDIPVY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.865 to 1b3uA SCOP code=a.118.1.2	TM-score=0.861 to 1b3uA SCOP code=a.118.1.2	TM-score=0.506 to 2r48A SCOP code=c.44.2.2	TM-score=0.538 to 1qgkA SCOP code=a.118.1.1	TM-score=0.506 to 2r48A SCOP code=c.44.2.2