Template-based Modeling Results for GADC_ECOLI

Submitted Primary Sequence

>Length 511
MATSVQTGKAKQLTLLGFFAITASMVMAVYEYPTFATSGFSLVFFLLLGGILWFIPVGLCAAEMATVDGWEEGGVFAWVSNTLGPRWGFAAISFGYLQIAIGFIPMLYFVLGALSYILKWPALNEDPITKTIAALIILWALALTQFGGTKYTARIAKVGFFAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFFPDFSKVGTLVVFVAFILSYMGVEASATHVNEMSNPGRDYPLAMLLLMVAAICLSSVGGLSIAMVIPGNEINLSAGVMQTFTVLMSHVAPEIEWTVRVISALLLLGVLAEIASWIVGPSRGMYVTAQKNLLPAAFAKMNKNGVPVTLVISQLVITSIALIILTNTGGGNNMSFLIALALTVVIYLCAYFMLFIGYIVLVLKHPDLKRTFNIPGGKGVKLVVAIVGLLTSIMAFIVSFLPPDNIQGDSTDMYVELLVVSFLVVLALPFILYAVHDRKGKANTGVTLEPINSQNAPKGHFFLHPRARSPHYIVMNDKKH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MATSVQTGKAKQLTLLGFFAITASMVMAVYEYPTFATSGFSLVFFLLLGGILWFIPVGLCAAEMATVDGWEEGGVFAWVSNTLGPRWGFAAISFGYLQIAIGFIPMLYFVLGALSYILKWPALNEDPITKTIAALIILWALALTQFGGTKYTARIAKVGFFAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFFPDFSKVGTLVVFVAFILSYMGVEASATHVNEMSNPGRDYPLAMLLLMVAAICLSSVGGLSIAMVIPGNEINLSAGVMQTFTVLMSHVAPEIEWTVRVISALLLLGVLAEIASWIVGPSRGMYVTAQKNLLPAAFAKMNKNGVPVTLVISQLVITSIALIILTNTGGGNNMSFLIALALTVVIYLCAYFMLFIGYIVLVLKHPDLKRTFNIPGGKGVKLVVAIVGLLTSIMAFIVSFLPPDNIQGDSTDMYVELLVVSFLVVLALPFILYAVHDRKGKANTGVTLEPINSQNAPKGHFFLHPRARSPHYIVMNDKKH
CCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MATSVQTGKAKQLTLLGFFAITASMVMAVYEYPTFATSGFSLVFFLLLGGILWFIPVGLCAAEMATVDGWEEGGVFAWVSNTLGPRWGFAAISFGYLQIAIGFIPMLYFVLGALSYILKWPALNEDPITKTIAALIILWALALTQFGGTKYTARIAKVGFFAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFFPDFSKVGTLVVFVAFILSYMGVEASATHVNEMSNPGRDYPLAMLLLMVAAICLSSVGGLSIAMVIPGNEINLSAGVMQTFTVLMSHVAPEIEWTVRVISALLLLGVLAEIASWIVGPSRGMYVTAQKNLLPAAFAKMNKNGVPVTLVISQLVITSIALIILTNTGGGNNMSFLIALALTVVIYLCAYFMLFIGYIVLVLKHPDLKRTFNIPGGKGVKLVVAIVGLLTSIMAFIVSFLPPDNIQGDSTDMYVELLVVSFLVVLALPFILYAVHDRKGKANTGVTLEPINSQNAPKGHFFLHPRARSPHYIVMNDKKH
5533233242210100000000000000022112112101100000000000000000000010021122341000000020013200000000000000000000000000000010212201222001000000000000001010031012012001000000000000000011022112111201121111201200000000000000000100000032032013201100110000000000000000000010312212201120000001101120300010000000000001000100000100010033320010003014320110000000000000000011112101100100000000000000000000000001322323210201102000000000000000000001000233032322110000000000000000000010013324233222232131330231121011202121101243459
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MATSVQTGKAKQLTLLGFFAITASMVMAVYEYPTFATSGFSLVFFLLLGGILWFIPVGLCAAEMATVDGWEEGGVFAWVSNTLGPRWGFAAISFGYLQIAIGFIPMLYFVLGALSYILKWPALNEDPITKTIAALIILWALALTQFGGTKYTARIAKVGFFAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFFPDFSKVGTLVVFVAFILSYMGVEASATHVNEMSNPGRDYPLAMLLLMVAAICLSSVGGLSIAMVIPGNEINLSAGVMQTFTVLMSHVAPEIEWTVRVISALLLLGVLAEIASWIVGPSRGMYVTAQKNLLPAAFAKMNKNGVPVTLVISQLVITSIALIILTNTGGGNNMSFLIALALTVVIYLCAYFMLFIGYIVLVLKHPDLKRTFNIPGGKGVKLVVAIVGLLTSIMAFIVSFLPPDNIQGDSTDMYVELLVVSFLVVLALPFILYAVHDRKGKANTGVTLEPINSQNAPKGHFFLHPRARSPHYIVMNDKKH
1	MUSTER	3l1lA	0.207	0.822	2.786	threading_1	---------AHKVGLIPVTLMVSGAIMGSGVFLLPANLGG-IAIYGWLVTIIGALGLSMVYAKMSFLDP-SPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLS--YFFPILK-DPWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFG------------WFWFRGETYMA----AIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSAS-----PFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQLS--SISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAY--------LAVTTIAFLYCIWAVVGS------------GAKEVMWSFVTLMVITAMYALNYN--RLHKNPYPLDA--------------------------------
2	SPARKS	3l1la	0.188	0.822	6.576	threading_2	---------AHKVGLIPVTLMVSGAIMGSGVFLLPANLGG-IAIYGWLVTIIGALGLSMVYAKMSFLDP-SPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYL--SYFFPILKD-PWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAV-------------FGWFWFRGETYMAA---IQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSAS-----PFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQLSSI--SPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAY-----------LAVTTIAFLYCIWAVVGSG-----------AKEVMWSFVTLMVITAMYALNYNRLHKNPYPLDA--------------------------------
3	PROSPECT2	3gi8C	0.141	0.845	3.545	threading_3	M-----ELKNKKLSLWEAVSMAVGVMIGASIFSVGAKIAGRNLPETFILSGIYALLVAYSYTKLGAKIV-SNAGPIAFIHKAIGDNIITGALS--ILLWMSYVISIALFAKGFAGYFLPLINAPINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVALLILGLFIF--------AGLITIHPSYVIPDLAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASEN--ALAVAAKPFL--GNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFKSTEGLYITSALGVLFALLF----------NMEGVASITSAVFMVIYLFVILSHYILIDE-VGGRKEIVIF------SFIVVLGVFLLLLYYQWI-------------TNRFVFYGIIATFIGVLIFEIIYRKVTKRTFSNNMY-----------------------------VKS
4	PPA-I	3l1lA	0.188	0.824	5.293	threading_4	---------AHKVGLIPVTLMVSGAIMGSGVFLLPANLASTIAIYGWLVTIIGALGLSMVYAKMSFLDP-SPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLS---YFFPILKDPWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFG----------------WFWFRGETYMAAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSAS-----PFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQLS--SISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKA-----------RPAYLAVTTIAFLYCIWAVV---------GSGAKEVMWSFVTLMVITAMYALNYN--RLHKNPYPLDA--------------------------------
5	HHPRED-l	3l1l_A	0.202	0.822	8.880	threading_5	---------AHKVGLIPVTLMVSGAIMGSGVFLLLASTGGIAIYGWLVTIIG-ALGLSMVYAKMSFLDPS-PGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPI--L-KDPWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRG--ETYMAA--------------IQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAA-----RMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQLSS-ISPNA-TKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHF--GKARPA------YLAVTTIAFLYCIWAVVG--S---------G--AKEVMWSFV--TLMVITAMYALNYNRLHKNPYPLDA-------------------------------
6	HHPRED-g	3gia_A	0.148	0.832	7.680	threading_6	-------LKNKKLSLWEAVSMAVGVMIGASIFSIFGVAGRN-LPETFILSGIYALLVAYSYTKLGAKIV-SNAGPIAFIHKAIGDNITGALSILLWMSYVISIALFAKGFAGYFLPLINAP---INTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIHPSYV-------I-PDLAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKA----SENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFKSTEGLYITSALGVLFALL-----F-----NMEGVASITSAVFMVIYLFVILSHYILID---------EVGGRKEIVIFSFIVVLGVFLLLLYYQWIT----------NRF---VFYGIIATFIGVLIFEIIYRKVTK-R------TFSNVKS-----------------------
7	SP3	3l1la	0.190	0.822	6.423	threading_7	---------AHKVGLIPVTLMVSGAIMGSGVFLLPANLGG-IAIYGWLVTIIGALGLSMVYAKMSFLDP-SPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYL--SYFFPILKD-PWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGW-------------FWFRGETYMAA---IQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSAS-----PFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQLSSI--SPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAY-----------LAVTTIAFLYCIWAVV---------GSGAKEVMWSFVTLMVITAMYALNY--NRLHKNPYPLDA--------------------------------
8	SAM-T99	3l1lA	0.190	0.822	8.704	threading_8	---------AHKVGLIPVTLMVSGAIMGSGVFLLPAASTGGIAIYGWLVTIIGALGLSMVYAKMSFLD-PSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFP---ILKDPWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETY----------------MAAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSSPFGDAARMAL------GDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQLSSI--SPNATKEFGLVSSVSVIFTLVPYLYTCAALLLL-------------GHGHFGKARPAYLAVTTIAFLYCIWAVV-----GSGAKEVMWSFVTLMVITAMYALN----YNRLHKNPYPLDA--------------------------------
9	MUSTER	3gi9C	0.139	0.845	2.742	threading_9	M-----ELKNKKLSLWEAVSMAVGVMIGASIFSIFGVGGR-NLPETFILSGIYALLVAYSYTKLGAKIV-SNAGPIAFIHKAIGDIITGALSILLWMSYVISIALFAKGFAGYFLPLIA----PINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIHPS--------YVIPDLAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASEN----ALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFK-STEGLYITSALGVLFALLFN---------MEGVASITSAVFMVIYLFVILSHYILIDE---------VGGRKEIVIFSFIVVLGVFLLLLYYQWI---------TNRFVFYGIIATFIGVLIFEIIYRKVTKRTFS-NNMYVKSLES---------------------------
10	SPARKS	3gi8c	0.144	0.843	6.553	threading_10	MEL-----KNKKLSLWEAVSMAVGVMIGASIFSIFGVGGRN-LPETFILSGIYALLVAYSYTKLGAKIV-SNAGPIAFIHKAIGD--NIITGALSILLWMSYVISIALFAKGFAGYFLPLINAPINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVALLILGLFIFAG--------LITIHPSYVIPDLAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASEN----ALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFKSTEGLYITSALGVLFALLFN----------MEGVASITSAVFMVIYLFVILSHYILIDEVGGRKEIVI----FSFIVVLGVFLLLLYYQWITN-----------------RFVFYGIIATFIGVLIFEIIYRKVTKRTFSNNMYVKS----------------------------

Predicted Tertiary Structure


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TM-score=0.651 to 2q6hA SCOP code=f.54.1.1	TM-score=0.653 to 2q6hA SCOP code=f.54.1.1	TM-score=0.649 to 2q6hA SCOP code=f.54.1.1	TM-score=0.673 to 2q6hA SCOP code=f.54.1.1	TM-score=0.651 to 2q6hA SCOP code=f.54.1.1