Template-based Modeling Results for GARD_ECOLI


  Submitted Primary Sequence

>Length 523
MANIEIRQETPTAFYIKVHDTDNVAIIVNDNGLKAGTRFPDGLELIEHIPQGHKVALLDIPANGEIIRYGEVIGYAVRAIPRGSWIDESMVVLPEAPPLHTLPLATKVPEPLPPLEGYTFEGYRNADGSVGTKNLLGITTSVHCVAGVVDYVVKIIERDLLPKYPNVDGVVGLNHLYGCGVAINAPAAVVPIRTIHNISLNPNFGGEVMVIGLGCEKLQPERLLTGTDDVQAIPVESASIVSLQDEKHVGFQSMVEDILQIAERHLQKLNQRQRETCPASELVVGMQCGGSDAFSGVTANPAVGYASDLLVRCGATVMFSEVTEVRDAIHLLTPRAVNEEVGKRLLEEMEWYDNYLNMGKTDRSANPSPGNKKGGLANVVEKALGSIAKSGKSAIVEVLSPGQRPTKRGLIYAATPASDFVCGTQQVASGITVQVFTTGRGTPYGLMAVPVIKMATRTELANRWFDLMDINAGTIATGEETIEEVGWKLFHFILDVASGKKKTFSDQWGLHNQLAVFNPAPVT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MANIEIRQETPTAFYIKVHDTDNVAIIVNDNGLKAGTRFPDGLELIEHIPQGHKVALLDIPANGEIIRYGEVIGYAVRAIPRGSWIDESMVVLPEAPPLHTLPLATKVPEPLPPLEGYTFEGYRNADGSVGTKNLLGITTSVHCVAGVVDYVVKIIERDLLPKYPNVDGVVGLNHLYGCGVAINAPAAVVPIRTIHNISLNPNFGGEVMVIGLGCEKLQPERLLTGTDDVQAIPVESASIVSLQDEKHVGFQSMVEDILQIAERHLQKLNQRQRETCPASELVVGMQCGGSDAFSGVTANPAVGYASDLLVRCGATVMFSEVTEVRDAIHLLTPRAVNEEVGKRLLEEMEWYDNYLNMGKTDRSANPSPGNKKGGLANVVEKALGSIAKSGKSAIVEVLSPGQRPTKRGLIYAATPASDFVCGTQQVASGITVQVFTTGRGTPYGLMAVPVIKMATRTELANRWFDLMDINAGTIATGEETIEEVGWKLFHFILDVASGKKKTFSDQWGLHNQLAVFNPAPVT
CCCCHHHHCCCCCCEEEECCCCCEEEEECCCCCCCCCEEECCEEECCCCCCCCEEEECCCCCCCEEEECCCEEEEECCCCCCCCEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHCCCCEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEECCHHHHHHCHHCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MANIEIRQETPTAFYIKVHDTDNVAIIVNDNGLKAGTRFPDGLELIEHIPQGHKVALLDIPANGEIIRYGEVIGYAVRAIPRGSWIDESMVVLPEAPPLHTLPLATKVPEPLPPLEGYTFEGYRNADGSVGTKNLLGITTSVHCVAGVVDYVVKIIERDLLPKYPNVDGVVGLNHLYGCGVAINAPAAVVPIRTIHNISLNPNFGGEVMVIGLGCEKLQPERLLTGTDDVQAIPVESASIVSLQDEKHVGFQSMVEDILQIAERHLQKLNQRQRETCPASELVVGMQCGGSDAFSGVTANPAVGYASDLLVRCGATVMFSEVTEVRDAIHLLTPRAVNEEVGKRLLEEMEWYDNYLNMGKTDRSANPSPGNKKGGLANVVEKALGSIAKSGKSAIVEVLSPGQRPTKRGLIYAATPASDFVCGTQQVASGITVQVFTTGRGTPYGLMAVPVIKMATRTELANRWFDLMDINAGTIATGEETIEEVGWKLFHFILDVASGKKKTFSDQWGLHNQLAVFNPAPVT
5531323332321100100321000000121214312202210201330331010002103221200201010010032034010001110222312212212112322331232321101001133031001100000000100010021003101321133122020000010110001122221010001001200201111000000010024121220120023132232321200002112321121002200200230032034333320302200000101202211101101000200100050100000120221230110002111333003201300210130022032322211020123100010022012101311411001002212412340000000110021000100001000000001210122021000000012230022123101010020021332032002200200010023333111231322110000111335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMANIEIRQETPTAFYIKVHDTDNVAIIVNDNGLKAGTRFPDGLELIEHIPQGHKVALLDIPANGEIIRYGEVIGYAVRAIPRGSWIDESMVVLPEAPPLHTLPLATKVPEPLPPLEGYTFEGYRNADGSVGTKNLLGITTSVHCVAGVVDYVVKIIERDLLPKYPNVDGVVGLNHLYGCGVAINAPAAVVPIRTIHNISLNPNFGGEVMVIGLGCEKLQPERLLTGTDDVQAIPVESASIVSLQDEKHVGFQSMVEDILQIAERHLQKLNQRQRETCPASELVVGMQCGGSDAFSGVTANPAVGYASDLLVRCGATVMFSEVTEVRDAIHLLTPRAVNEEVGKRLLEEMEWYDNYLNMGKTDRSANPSPGNKKGGLANVVEKALGSIAKSGKSAIVEVLSPGQRPTKRGLIYAATPASDFVCGTQQVASGITVQVFTTGRGTPYGLMAVPVIKMATRTELANRWFDLMDINAGTIATGEETIEEVGWKLFHFILDVASGKKKTFSDQWGLHNQLAVFNPAPVT
1SPARKS3laza0.9360.1801.999threading_1AANIKIRQETPTAFYIKVHDTDNVAIIVNDNGLKAGTRFPDGLELIEHIPQGHKVALLDIPANGEIIRYGEVIGYAVRAIPRGSWIDESVVLPE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2PROSPECT21iexa0.0780.9041.368threading_2DYVLYKDATKPVEDRVALLGRMTTQIERLVATPDVLRDNFIGSLLSGGGSVP-----RKGATAKEWQDMVDGFQKACMS---------------------------------TRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGAYLVKRIGEATALEVRATGIQYAFAPCIAVCRDPSYSEDRRIVQSMTELIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNT------IINREGLMNIHMPAYKNAMDLVTGYLKDTLKFKGFVISDWEGIDRITTPAGSD--YSYSVKASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFENPYADPAMAEQLGKQEHRDLAREAARKSLVLLKNGKTSTDAPKKAPKILVAGSHADNLGYQC----GGWTIEWQGDTGRTTVVDPSTVVVFAENPDAEFVKSGGFSYAIVAVGEHPYTETKGGLSTVQAVCGLISGRPVVVQPLLAASDALVAAWLPGSK
3PPA-I3lazA0.9360.1801.514threading_3AANIKIRQETPTAFYIKVHDTDNVAIIVNDNGLKAGTRFPDGLELIEHIPQGHKVALLDIPANGEIIRYGEVIGYAVRAIPRGSWIDESVVLPE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4PROSPECT21pieA0.0880.7191.315threading_4TVLSALTEKGDTKEVEYFFSPGRINLIGEHTDYNGGYVFPASITI------GTTGLARLREDKKVKLYSE------------------------NFPKLGVIEFDLDEVEKKDGELW----------------------------SNYVKGMIVMLKGAGYEIDKGFELLIKGEIPTASGLSSSASLELLVGVVLDDLFNLN---------------VPRLELVQLGQKTENDYIGVNS---------GILDQFAIGFGEVKKAIELDCNTLKYEPVELRDYDIVIMNTNKPRALTESKYNERFAETREALKRMQTRLDIQSLGELSNEEFDTDLIGDETLIKRARHAVYENNRTKIAQKAFVAGN------LTKFGELLNASHASLKDDYEVT--------------------GLELDTLAETAQKQAGVLGARMTGAGFGGC------AIALVA--------------------------HDNVSAFRKAVGQVY-------EEVVGYPASFYVAQIGSKL
5HHPRED-l3laz_A0.9890.1786.543threading_5-ANIKIRQETPTAFYIKVHDTDNVAIIVNDNGLKAGTRFPDGLELIEHIPQGHKVALLDIPANGEIIRYGEVIGYAVRAIPRGSWIDES-VVLPE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6PROSPECT21a3wa0.1010.7761.302threading_6ARKSEELYPGRPLAIALDTKGPEIRTGTTTNDVDYPIPPNHEMIFTTDDKYAKA-----CDDKIMYVDYKNIT----KVISAGRIIY----------------VDDGVLSFQVLEVVDTLKVKALNAGKICSHKGVNLPVDLPALSEKDKEDLRFGVKN------GVHMVFA-------SFIRTANDVLTIREVLGEQGKDVKIIVKI-------ENQQGVNNFDEILKVTD--------GVMVARGDLGIEIPAPEVLAVQKKLIAKSNLAGKP------VICATQMLESMTYNPRPTRAEVSDVGNAILDGADCVMLSGETAKGNYPINAV------TTMAETAVIAIAYLPNYDDMRNCTPKPTST------TETVAASAVAAVFEQKAKAIIVLSTSGYRPNCPIILVTRCPR---AARFSHLYRGVFPFVFEKEPVSDWTD--------------------------------------DVEARINFGIEKAKEFGIL-----KKGDTYVSIQGFKAG
7HHPRED-g3laz_A0.9890.1785.758threading_7-ANIKIRQETPTAFYIKVHDTDNVAIIVNDNGLKAGTRFPDGLELIEHIPQGHKVALLDIPANGEIIRYGEVIGYAVRAIPRGSWIDES-VVLPE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8PROSPECT21a49a0.1020.8471.292threading_8IQDIDSAPITARNTGIIIKSGMNVARMTESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKWLDYKNICKVVDVGSKVYVDDGLISLQVKQKGPDFLVTEVENGGFLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVE---QDVDMVF-------ASFIRKAADVHEVRKILGEKGKNIKIISKI-------ENHEGVRRFDEILEASD--------GIMVARGDLGIEIPAEKVFLAQKMIIGRCNRAGKP------VICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQ--HLIAREAEAAMFHRKLFEELARSSSHSTDLMEAMAMGSVEASYKC-----------------------LAAALIVLTESGRSAHQVAR------------------YRPRAPIIAVTRNHQTARQAHLYRGIFPVVCDPVQEAWAEDVDLRVNLAMNVG------KARGFFKKGDVVIVRVVPVP
9SP33laza0.9680.1802.133threading_9AANIKIRQETPTAFYIKVHDTDNVAIIVNDNGLKAGTRFPDGLELIEHIPQGHKVALLDIPANGEIIRYGEVIGYAVRAIPRGSWIDESVV-LPE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10MUSTER1uhvA0.1320.8570.642threading_10MIKVRVPDFSDKK----FSDRWRYCVGTGRLGLALQKEYIETLYVKENIDFGHGLLCDDVGIYREDVVGDEVKPFY--NFTYIDRIFDSFLEIGIRPFVEIGFMPKKLASGTQTVFYWEGNVTPPKD--------------YEKWSDLVKAVLHHFISRYGIEEVLKWPFEIWNEPNLKEFWADEKEYFKLYKVTAKAIKEVNENLKVGGPAIGGADYWIEDFLNFCYEE-NVPVDFVSRHAYTSKQGEYTIMPSEYMLNEFKTVREIIKNSHFPNLPF--HITEYNTSYSPQNPVHDTPFNAAYIARILSEGGDSFSYWTFSDVFEE------RDVPRSQFHGGFGLVA------------LNMIPKPTFYTFKFFNAM---GEEMLYRDEHMLVTRRDDGSV-----ALIAWNEVMD-YEVEIPVRFRVFIKRQLIDEGNPWGRPRYP------SKEQVNTLREVAKP---EIMTSQPVAND-GYLNLKFKL---------------GKNAVVLYELTERI

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.308 to 1opsA
SCOP code=b.85.1.1
TM-score=0.805 to 1iexA
SCOP code=c.1.8.7
TM-score=0.308 to 1opsA
SCOP code=b.85.1.1
TM-score=0.827 to 1pieA
SCOP code=d.14.1.5
TM-score=0.752 to 1a3wA
SCOP code=b.58.1.1