Template-based Modeling Results for PTKC_ECOLI

Submitted Primary Sequence

>Length 451
MFSEVMRYILDLGPTVMLPIVIIIFSKILGMKAGDCFKAGLHIGIGFVGIGLVIGLMLDSIGPAAKAMAENFDLNLHVVDVGWPGSSPMTWASQIALVAIPIAILVNVAMLLTRMTRVVNVDIWNIWHMTFTGALLHLATGSWMIGMAGVVIHAAFVYKLGDWFARDTRNFFELEGIAIPHGTSAYMGPIAVLVDAIIEKIPGVNRIKFSADDIQRKFGPFGEPVTVGFVMGLIIGILAGYDVKGVLQLAVKTAAVMLLMPRVIKPIMDGLTPIAKQARSRLQAKFGGQEFLIGLDPALLLGHTAVVSASLIFIPLTILIAVCVPGNQVLPFGDLATIGFFVAMAVAVHRGNLFRTLISGVIIMSITLWIATQTIGLHTQLAANAGALKAGGMVASMDQGGSPITWLLIQVFSPQNIPGFIIIGAIYLTGIFMTWRRARGFIKQEKVVLAE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MFSEVMRYILDLGPTVMLPIVIIIFSKILGMKAGDCFKAGLHIGIGFVGIGLVIGLMLDSIGPAAKAMAENFDLNLHVVDVGWPGSSPMTWASQIALVAIPIAILVNVAMLLTRMTRVVNVDIWNIWHMTFTGALLHLATGSWMIGMAGVVIHAAFVYKLGDWFARDTRNFFELEGIAIPHGTSAYMGPIAVLVDAIIEKIPGVNRIKFSADDIQRKFGPFGEPVTVGFVMGLIIGILAGYDVKGVLQLAVKTAAVMLLMPRVIKPIMDGLTPIAKQARSRLQAKFGGQEFLIGLDPALLLGHTAVVSASLIFIPLTILIAVCVPGNQVLPFGDLATIGFFVAMAVAVHRGNLFRTLISGVIIMSITLWIATQTIGLHTQLAANAGALKAGGMVASMDQGGSPITWLLIQVFSPQNIPGFIIIGAIYLTGIFMTWRRARGFIKQEKVVLAE
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MFSEVMRYILDLGPTVMLPIVIIIFSKILGMKAGDCFKAGLHIGIGFVGIGLVIGLMLDSIGPAAKAMAENFDLNLHVVDVGWPGSSPMTWASQIALVAIPIAILVNVAMLLTRMTRVVNVDIWNIWHMTFTGALLHLATGSWMIGMAGVVIHAAFVYKLGDWFARDTRNFFELEGIAIPHGTSAYMGPIAVLVDAIIEKIPGVNRIKFSADDIQRKFGPFGEPVTVGFVMGLIIGILAGYDVKGVLQLAVKTAAVMLLMPRVIKPIMDGLTPIAKQARSRLQAKFGGQEFLIGLDPALLLGHTAVVSASLIFIPLTILIAVCVPGNQVLPFGDLATIGFFVAMAVAVHRGNLFRTLISGVIIMSITLWIATQTIGLHTQLAANAGALKAGGMVASMDQGGSPITWLLIQVFSPQNIPGFIIIGAIYLTGIFMTWRRARGFIKQEKVVLAE
3132002101200110000000000020010201200300010000000000000000200020021003202030100001010100011001001000000000100011031120000000000000000000000010100000000000000010021013102300503101001000000000000000002200003304011320142000011100000000000000111303000200010000010002003000300120022022203231221100000010010121100000000000000000001213101000000000000000000311002000000000000000001000000200130102321000000112000000000100112211000000000000000002202101332322325
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MFSEVMRYILDLGPTVMLPIVIIIFSKILGMKAGDCFKAGLHIGIGFVGIGLVIGLMLDSIGPAAKAMAENFDLNLHVVDVGWPGSSPMTWASQIALVAIPIAILVNVAMLLTRMTRVVNVDIWNIWHMTFTGALLHLATGSWMIGMAGVVIHAAFVYKLGDWFARDTRNFFELEGIAIPHGTSAYMGPIAVLVDAIIEKIPGVNRIKFSADDIQRKFGPFGEPVTVGFVMGLIIGILAGYDVKGVLQLAVKTAAVMLLMPRVIKPIMDGLTPIAKQARSRLQAKFGGQEFLIGLDPALLLGHTAVVSASLIFIPLTILIAVCVPGNQVLPFGDLATIGFFVAMAVAVHRGNLFRTLISGVIIMSITLWIATQTIGLHTQLAANAGALKAGGMVASMDQGGSPITWLLIQVFSPQNIPGFIIIGAIYLTGIFMTWRRARGFIKQEKVVLAE
1	PROSPECT2	1jdha	0.105	0.931	1.980	threading_1	AIPELTKLLNDEDQVVVNQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKS--GGIPALVKMLGSPVDVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTN-------VKFLAITTDCLQILAYGNQESKLIILGPQALVNIKLLWTTSRVLKVLSVCSSNKLTDPSQRLVQNCLWTLRNLSD---AATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLR--AGDREDITEPAICALRHLTSRH------------QEAEMAQNAVRLHYGLPVVVKLLHPPS-----HWPLIKATVGLIRNLALCPANHAPLRGAIPRLVQLLVRAHMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAEGVATYAAAVLFR
2	PPA-I	1b3uA	0.095	0.882	1.362	threading_2	AASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLP-QEDLEALVMPTLRQAAED---------KSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDE--------------------CPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEKWRVRLAIIEYMPLLAGQLGV-----EFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKF--------GKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRM----------AGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTVDVKYFAQEALTVLSL
3	SP3	3c48a	0.143	0.820	1.039	threading_3	-----------------SHMRVAMISMHTSPLQQGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVR-VAENLRVINIAAGP-----YEGLSKEELPTQLAAFTGGMLSFTRREKVTYDLIHYWLSGQVGWLLRDLWRILIHTAHTLAAVKNSYDTPESEARRICEQQLVADVLAVNTQEEMQDLMHHYDADPDISVVSGADLYSPGTERSRRELGIPLHTKVVAFV-----GRL--QPFKGPQVLIKAVAALFDRDPD-RNLRVIICGGPSDTYRHMAEEGVEKRIRFLDRPPSEL---VAVYRAADIVAGLVAMEAQAS-G---TPV-------------IAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDD-----------------DETRIRMGED-------------AVEHARTFSWAATAAQLSSLYNDAIAN
4	PROSPECT2	1b3ua	0.085	0.987	1.895	threading_4	SIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGYVHCLLPPLESLATTVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRRAAASKLGEFAKVLELDNVKSEIIPMFSNLDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPAFQNLMKDCEAEVRAHKVKEFCENLSADCRENVIMSQILPCIKESVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIIDCVNEVIGIRQLSQSLLPAILAEDAKWRVRLAIIEYMPLLAGQLG------VEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAVAKSLQKIGPILDNSTLQSEVKPILEK
5	PPA-I	3zuxA	0.112	0.616	1.189	threading_5	---------------------------------------------------------------------------------------------------------------------------------NILSKISSFIGKTFSLWAALFAAAAFFA-----------------PDTFKWAGPYIPWLLGIIMFGMGLTL-----KPSDFDILFKHPKV-----VIIGVIAQFAIMPATAWCLSKLLNLPAEIAVGVILVGCTASNVMTYLTLTSPLLTPAIFLML------AGEMLEIQAAGMLMSIVKMVLLPIVLGLIVHLGSEKLTDALPLVSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKALTIGMQNSGLAAALAAAHFAAAPGALFSVWHNISGSLLATYWAAKA-----------
6	PROSPECT2	1w63A	0.105	0.989	1.884	threading_6	MCAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLFTDKRIGYLGAMLLLQDVHLLMTNCIKNDLNHSTQFVCMGSSEMCYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVV-LLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILMNDILAQVATNTETSKNVGNVLTIMDIKSESGLRVLAINILGRFLLNNDLTSLLKTVQTDHNAVQHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSK---RWHIDTIMRVLTTAGSYVRDDAVPNLIQLITYTVQRLYLVQVAAWCIGEYGDLLVSGQCEEE-EPIQVTEDEVLDILESVLISNMSTSVTRGYALTAIMKLSTVNRIKKVVSIRSALLER
7	PPA-I	3g61A1	0.102	0.588	1.146	threading_7	--------------------------------------------------------------------------------------------------------------------------------------------------------VSVLTMFR---YAGWLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDS--------FASVGNVSKNSTNMSEADKRAMFAKLEEEMT---TYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMN-------QEIGWFDVHDVGELNTRLTDDVSKINEGI---GDKIGMFFQAMATFFGGFIIGFTRIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFKIIDNKPSIDSFS----------GWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEG
8	PROSPECT2	3a6pA1	0.062	0.929	1.844	threading_8	LCEQLVKAVTNSTQRYRLEACVPCGLRLAEKTQVAIVRH-----FGLQILEHVVKFRWNGMSRLEKVYLKNSVMELIANGTLNILEEENHIKDALSRIVVEMIKREDMLIELDTLSKQGETQTELVMFILLRLAEDVVTFQTLPPQRRRDIQQTLIFSFLLNTLQENVNKYQQVKTDTSQESKAQANCRVGVAALNTLAGYIDW----VSMSHITA-----ENCKLLEILC---LLLNEQELQLGAAECLLIAVSRKGKLEDRKPLMVLFGDVAMHYILSAAQTADGGG-----LVEKHYVFLKRLCQVLCALGNQLCALLGADSDVETPSN-----FGKYLESFLAFTTHPSQFLRSSTQMTWGALFLLLAIIPKYLRASMTNLVKMGFPS-----KTDSPSCEYSDEDFNAFFNSSRAQQGEVMRLACRLDPKTSFQMAGEWLKYQLST
9	PPA-I	3ea5B	0.085	0.940	1.117	threading_9	LMKIMVDNTGAEQPENVKRASLLALGYMCESNILIAIVQGAQKAVRLAALNALADSLIFIKNNMEREGERNY------------LMQVVCEATQAEDIEVQAAAFGCLCKIMSKYYTF----MKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYELAQFPQSPLQSYNFALSSIKDVVPNLLNLLTRQNEDPEDDDWNAGACLQLFAQNCGNHILEPVLEFVEQNITADNEAAVMAFGSDKVQRTYYVHQALPSILNLMNWCIGRIADSVAESIDPQQHLPGVVQACLIDHPKVATNCSWTIINLVEQLAEATPSPIYNFYPALVDGLIGAANRIDNEFNARASAFSALTTMVEYAETSASISTFVMDKLGQT-----------MSVDENQLTLEDAQSLQELQSNILTVLAAVIRKSPSSVEPVADMLMGLFFRLLEK
10	PROSPECT2	1ejlI	0.082	0.838	1.804	threading_10	SVEDIVKGINSNNLESQLQATQAARKLLSREKIDNIIRAG--------LIPKFVSFLGKTDCSPIQFESAWA-------------LTNIASGTSEQTKAVVDGGAIPAFISLLASPH-------AHISEQAVWALGNIAGDG----------SAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSN------LCRNKNPAPPLDAVEQRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLPIVTPALRAIGNIVTGTDEQTQKVIDAG----ALAVFPSLLTNPKTN---IQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAI-----TNYTSGGTVEQIVYLVHCGIIE-----------------PLMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECG

Predicted Tertiary Structure


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TM-score=0.920 to 1kpkA SCOP code=f.20.1.1	TM-score=0.655 to 1ialA SCOP code=a.118.1.1	TM-score=0.764 to 1b3uA SCOP code=a.118.1.2	TM-score=0.574 to 2iw1A SCOP code=c.87.1.8	TM-score=0.780 to 1pw4A SCOP code=f.38.1.1