Template-based Modeling Results for GFCB_ECOLI


  Submitted Primary Sequence

>Length 214
MRPLILSIFALFLAGCTHSQQSMVDTFRASLFDNQDITVADQQIQALPYSTMYLRLNEGQRIFVVLGYIEQEQSKWLSQDNAMLVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQMLGAGVIPVEMTFLKPAP
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRPLILSIFALFLAGCTHSQQSMVDTFRASLFDNQDITVADQQIQALPYSTMYLRLNEGQRIFVVLGYIEQEQSKWLSQDNAMLVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQMLGAGVIPVEMTFLKPAP
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEECHHHHHCCCCCEEEEEECCCCCEEEEEEEECCCEEEEEECCCEEEEEECCEEEEEECCCCCHHHHCCCCCCHHHHCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEECCCCEEEEECCCCEEEEEEEEEEEECCCCCEEEEEEEEECCCCCEEEEEEEECCCCCEEEEEEECCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MRPLILSIFALFLAGCTHSQQSMVDTFRASLFDNQDITVADQQIQALPYSTMYLRLNEGQRIFVVLGYIEQEQSKWLSQDNAMLVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQMLGAGVIPVEMTFLKPAP
4311000000000010222132012001100133431200231033132100002034142000000002322010012221000012000010020231112011223121221121231110110011133120100101010213222102012320201001120202423220100000122312011021000221110102002336
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMRPLILSIFALFLAGCTHSQQSMVDTFRASLFDNQDITVADQQIQALPYSTMYLRLNEGQRIFVVLGYIEQEQSKWLSQDNAMLVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQMLGAGVIPVEMTFLKPAP
1MUSTER2in5A0.9310.8833.311threading_1------------------HSQQSVDTFRASLFD---NQVADQQIQALPY-STYLRLNEGQRIFVVLGYIEQEQSKWLSQDNA-LVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQLGAG-VIPVET-FLKPAP
2SPARKS2in5a0.9580.8833.987threading_2------------------HSQQSVDTFRASLFDNQ---VADQQIQALPY-STYLRLNEGQRIFVVLGYIEQEQSKWLSQDN-ALVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQ-LGAGVIPVET-FLKPAP
3PROSPECT22in5A0.9150.8832.939threading_3------------------HSQQSVDTFRASLFDNQV---ADQQIQALPYS-TYLRLNEGQRIFVVLGYIEQEQSKWLSQDN-ALVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQLGAGVIPVE--TFLKPAP
4PPA-I2in5A0.9150.8836.186threading_4------------------HSQQSVDTFRASLFD---NQVADQQIQALPYS-TYLRLNEGQRIFVVLGYIEQEQSKWLSQDNA-LVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQLGAG--VIPVETFLKPAP
5HHPRED-l2in5_A1.0000.87911.791threading_5-----------------HSQQS-VDTFRASLFDNQ---VADQQIQALPYST-YLRLNEGQRIFVVLGYIEQEQSKWLSQDNA-LVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQ-LGAGVIPVE-TFLKPA-
6HHPRED-g2in5_A1.0000.88310.601threading_6-----------------HSQQS-VDTFRASLFDNQ---VADQQIQALPYST-YLRLNEGQRIFVVLGYIEQEQSKWLSQDNA-LVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQ-LGAGVIPVE-TFLKPAP
7SP32in5a0.9580.8831.976threading_7------------------HSQQSVDTFRASLFDNQ---VADQQIQALPY-STYLRLNEGQRIFVVLGYIEQEQSKWLSQDN-ALVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQ-LGAGVIPVET-FLKPAP
8SAM-T992in5A0.9730.8746.008threading_8--------------------QQSVDTFRASLFDNQ---VADQQIQALPY-STYLRLNEGQRIFVVLGYIEQEQSKWLSQDNA-LVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQ-LGAGVIPVET-FLKPAP
9MUSTER3fzxA0.1370.8550.724threading_9---------------CAFPNQE-GEQITRNCYTADGKLTNI-----LVYRVDQAYEYPSGEVVANYTFADAAGKTLNSGQVA--RCSDGNFS---GDVATFPTALNNAPDAFSNPNPGDDDETLRLYQKGNKNNRAEISVFDREFV--TTETVNTPAGAFYCTKVKYENIWTPKEIKGYGYEWYAPNIG-IVRSEQYNNKKQSYSVLERIKK--
10SPARKS3mh8a0.1600.8460.720threading_10--------------GPLPDAKPLVEEATAQTKALKSAHMVNGKIPGLSLKTLSGDLTTNPTAATGNVKLTLGDADFVVFDGILYAT---------LTPNQWSDFGPAADDPAQVLNPDTGLANVLA--------NFADAKAEGRDTINGQNTIRISG-KVSAQAVNQIAPPFNATQPVPATVWIQETGDQLAQAQLDRGSG-NSVQMTLSKGEK

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.907 to 2in5A
TM-score=0.965 to native
SCOP code=b.177.1.1
TM-score=0.917 to 2in5A
TM-score=0.976 to native
SCOP code=b.177.1.1
TM-score=0.914 to 2in5A
TM-score=0.973 to native
SCOP code=b.177.1.1
TM-score=0.922 to 2in5A
TM-score=0.982 to native
SCOP code=b.177.1.1
TM-score=0.916 to 2in5A
TM-score=0.975 to native
SCOP code=b.177.1.1

  Experimental Structure

Download 2in5A
SCOP code=b.177.1.1