Template-based Modeling Results for GLPB_ECOLI

Submitted Primary Sequence

>Length 419
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVTDIHSGLESLRQQAPAHPYSLLEPQRVLDLACQAQALIAESGAQLQGSVELAHQRVTPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELGLAVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVTDIHSGLESLRQQAPAHPYSLLEPQRVLDLACQAQALIAESGAQLQGSVELAHQRVTPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELGLAVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ
CCCCEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCEECCCCHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEECCCEEEEEEEECCEEEEEEEECCCCEEEECCEEEEEECCCCCCCEECCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCHHHHCCEEECCCCCCCCCCCCCCCEEEECHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVTDIHSGLESLRQQAPAHPYSLLEPQRVLDLACQAQALIAESGAQLQGSVELAHQRVTPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELGLAVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ
55100000000000000001023221200002322210000100031112113132021011002101310231210001121012002201200220113131213201110011010100000123121220223200000021022020300010033120202001010131321232212120010020022331021002001300321200000000012233002100321312001012122101001012101310242201002112012020331101000122223020203000000011112001022310110012020221221121021201131002210010132021132131030000000000001001211110000000010022002422334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVTDIHSGLESLRQQAPAHPYSLLEPQRVLDLACQAQALIAESGAQLQGSVELAHQRVTPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELGLAVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ
1	MUSTER	1lpfA	0.177	0.809	1.249	threading_1	QKFDVVVIGAGPGGYVAAIRAAQLGLKTACIEKYIGGTCLNVGCIPSKALLDSSYKYHEAKEAFKVHGIEAKGVTI-------VPAMVARKANIVKNLTGGIATLFKAN----------GVTSF---EGHGKLLANKQVEVTGLDGKTQ---VLEAENV----IASGSRPVEIPPAP-----LSDDIIVDSTGALEFQAVPKKL------------GVIGAGVIGLELGSVWARLG----AEVTVLEALDKFLPDEQIAKEALKVLTKQGLNIRLGARVTASEVKKKQVTVTFTDANGEQKETFDKLIVAVGRPVTTDLLAA---------DSGVTLDER------------------GIYVDDHCKTS-----VPGVFAIGDVVRGAMLAHKASEEGVMVAERIAIAEQTLKAEGVEV
2	SPARKS	3l8ka	0.147	0.761	3.128	threading_2	LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGGGNCLYSGCVPSKTVREVIQTAWRLTNIFSTVQDRK---------DYVQELRFKQHKRNMSQ---------YETLTFY----KGYVKIKDPTHVIVKTDEGKEIEAETR--------YMI--------IASGAETAKLRLPGV----EYCLTSDDIGYKTSFRKLPQDM------------VIIGAGYIGLEIASIFRLM----GVQTHIIEMLDRALITQDIVNTLLSIL---KLNIKFNSPVTEVKKIKDDEYEVITKDGSKKSIFTNSVVLAAGRPVIPE-GAREIGL----------SISKT-----------------GIVVDETMKTNI-----PNVFATGDANGLAPYYHAAVRMSIAAANNIM------ANGMPVD
3	PROSPECT2	1d5ta	0.101	0.902	1.743	threading_3	HHYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVE-----------------GSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVA--------NFDENDPKTFEGVDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRT---DDYLDQPCLETINRIKLYSKSPYLYPLYGLG-----ELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKS---EGEVARCKQLICDPSYVPDRVRKAGQVIRIICILSHPIKNTNDANSIPQNQVNRKSDIYVCMISYAHNVAAQG-----KYIAIASTTVETTDPEKESYDATTHFETTCNDIKDIYKRMAGSA
4	PPA-I	2eq9D1	0.144	0.778	2.051	threading_4	KTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGEGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKLWRDQVVKKLTGGVGTLLKGN---------GVELLRGFARLVGPKEV--EVGGERYGAKSLILA-----------------------TGSEPLELKGFPFGE------DVWDSTRALKVEEG-----------LPKRLLVIGGGAVGLELGQVYRRLG----AEVTLIEYMPEILPQPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPGGEGEEVVVDKVLVAVGRPRTEGLGLEK-------AGVKVDERGF-------------------IRVNARMETS-----VPGVYAIGDAARPPLLAHKAMREGLIAAENAAGKDSAF-------
5	HHPRED-l	1chu_A	0.162	0.826	1.981	threading_5	HSCDVLIIGSGAAGLSLALRLADQH-QVIVLSKGPE------------F---------DETDSIDSHVEDTLIAGAGICDRHAVEFVASNARSCVQWLIDQGVL-------------------------------TTLVKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVYQ----YTTNPDISSGDGIAMAWRAGCRVANLEFNQFHPTALYHPQANFLLTEALRGEGAY-LKRPDGTRFMPDFDERGELAPRDI-VARAIDHEMKRLGADCMFLDISHKPADFIRQHFPMIYEKLLGLGIDLTQE-----PVPIVPAAHYTCGGVMVDDHGRT-----DVEGLYAIGEVSTGLHGANRMASNLECLVYGWSAAEDITRRM----
6	HHPRED-g	1dxl_A	0.156	0.797	2.021	threading_6	DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRLGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEI------DLAAMMGQKDKAVSNLTRGIEGLFKKNKVTVKGYGKF--------------VSPSEISVDTIEGENVVKG-------KHIIIATGSDVKSLPGVTIDE-----KKIVSSTGALALSEIPKKLV------------VIGAGYIGLEMGSVWG----RIGSEVTVVEFASEIVPTMDIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEAGGEQTIIEADVVLVSAGRPFTSGLNLDKIGVETD--------------------------KLGRILVNERFST-----NVSGVYAIGDVIPGPMLAHKAEEDGV------ACVEYLAGKVGHVD
7	SP3	3l8ka	0.155	0.783	3.342	threading_7	LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGGGNCLYSGCVPSKTVREVIQTAWRLTNIA--------NVKIP-LDFSTVQDRKDYVQELRFKQHKRNM-SQYETLTFYKGYVKIKD----PTHVIVKTDEGKEIEAETR--------YMI--------IASGAETAKLRLPGVEYC---LTSDDIFGYKTSFRKLPQDM------------VIIGAGYIGLEIASIFRLM----GVQTHIIEMLDRALITQDIVNTLLSIL---KLNIKFNSPVTEVKKIKDDEYEVITKDGSKKSIFTNSVVLAAGRPVIPE-------------GAREIGLS---------------ISKTGIVVDETMKTN-----IPNVFATGDANGLAPYYHAAVRMSIAAANNIM------ANGMPVD
8	SAM-T99	3fbsB	0.206	0.685	1.699	threading_8	MKFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLG-----QDGKAPGEIIAEARRQIERYPTIHWVEGRVTDAKGSFGEFIVEIDGG------------------------------------------------------RRETAGRLILAMGVTDELPEIAGLRERW------------------------------GSAVFHCPYCHGYELDQGKIGVIAASPMAIHHALMLPDWGETTFFTNGIVELLAARGVRVETT----RIREIAGHAD-VVLADGR---------IALAGLFTQPKLRITVDWIEK--LGCAVEEGPM----------------GSTIVTDPMKQT-----TARGIFACGDVARPAGSVA------LAVGDGAMAGAAAHRSILFPE
9	MUSTER	1ebdA	0.157	0.804	1.246	threading_9	IETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKGNGGVCLNVGCIPSKALISASHRYEQAKH--------SEEMGIKAENVTIFAKVQEWKASVVKKLTGGVEGLLKGN----------KVEIV---KGEAYFVDANTVRVVNGDSAQTYTFKNAI-------IATGSRPIELPNFK------FSNRILDSTGALNLGEVPKSL------------VVIGGGYIGIELGTAYANFG----TKVTILEGAGEILSGKQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRPNTDELGLEQIGI----------KMTNR-----------------GIEVDQQCRTS-----VPNIFAIGDIVPGPALAHKASYEGKVAAEAIACAEQQAKDEGIDV
10	SPARKS	2a8xa	0.164	0.785	3.035	threading_10	THYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKYGGVCLNVGCIPSKALLRNAELVHIFTKD-------AKAFGISGEVTFDYGIAYDRSRKVAEGRVAGVHFLKKNKITEIHGYGTF----ADANTLLVDLNDGGTESVTFD--------NAI--------IATGSSTRLVPGTSLSAN------VVTYEEQILSRELPKSI------------IIAGAGAIG-EFGYVLKNY----GVDVTIVEFLPRALPNADVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFPNVEGY------------GLD----------------------KAGVALTDRKAIGVDDYNVGHIYAIGDVNGLLQLAHVAEAQGVVAAETI------AGAETLTL

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.613 to 1lpfA SCOP code=c.3.1.5	TM-score=0.727 to 1ebdA SCOP code=c.3.1.5	TM-score=0.670 to 1f6mA SCOP code=c.3.1.5	TM-score=0.857 to 1d5tA SCOP code=c.3.1.3	TM-score=0.615 to 1f6mA SCOP code=c.3.1.5