Template-based Modeling Results for GLPK_ECOLI

Submitted Primary Sequence

>Length 502
MTEKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITNQRETTIVWEKETGKPIYNAIVWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRGELLFGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQTNIGGKGGTRIPISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMKLINDAYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQEKAVIEREFRPGIETTERNYRYAGWKKAVKRAMAWEEHDE
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTEKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITNQRETTIVWEKETGKPIYNAIVWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRGELLFGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQTNIGGKGGTRIPISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMKLINDAYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQEKAVIEREFRPGIETTERNYRYAGWKKAVKRAMAWEEHDE
CCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECCCEEEEEEECCCCCCCCCCCEECCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCEEEECCHHHHEEECCCCCEEEECCHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCEEEEEEEEECCCEEEEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTEKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITNQRETTIVWEKETGKPIYNAIVWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRGELLFGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQTNIGGKGGTRIPISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMKLINDAYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQEKAVIEREFRPGIETTERNYRYAGWKKAVKRAMAWEEHDE
5533200000021000010000134121001012203210133110210021002000200120033141213100000001221000000231231011000011220230022035312331012101110011000010100121132013204412000000000000101412000010100011000103213102300200301331003034013111312221211230000000001000000210133020100101000000002232241420000000001322100002000100000020013104103113101200341332310000000001000100220100000012102031001000100010022002001320213021010110001020001000100202021031310100000000001011132031013202222202122322202210200120022012133344
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTEKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITNQRETTIVWEKETGKPIYNAIVWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRGELLFGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQTNIGGKGGTRIPISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMKLINDAYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQEKAVIEREFRPGIETTERNYRYAGWKKAVKRAMAWEEHDE
1	MUSTER	3ezwG	0.998	0.992	3.921	threading_1	-TEKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITNQRETTIVWEKETGKPIYNAIVWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRGELLFGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQTNIDGKGGTRIPISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMKLINDAYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQEKAVIEREFRPGIETTERNYRYAGWKKAVKRAMAWEE---
2	SPARKS	3kzba	0.200	0.954	6.495	threading_2	-SLAFYIATFDIGTTEVKAALADRDGGLHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWW-QSGVDARRVSAIVLSGQQNFLPLD--QDHEPLHRAVLYSDKRPLKEAEEINARHGADNLWSALENPTAAS-ILPKLVFWRASFPQAFGRL--RHVVLGA-KDYVVLRLTG--RHATDRTNASTTGLYRPKDDAWHVELLADYGFSLDL-PRLLEPGEQVGGVSALTGFVSGTPVLCGLGDAGAATLGVGVLDDEDAYLHLGTTGWLARLTQTDPVGDPVGTIFRLAGIIAG--KTLQVAPVLNAGNILQWALTLVGHRPGEDCAEYFHAGVTVPDGLLFVPYLHAERCPVELPAPRGALLGVTGATTRAQILLAVLEGAALSLRWCAELL----GEKVGLLKVVGGGARSEAWLRIADNLNVSLLVKPDAHLHPLRGLAALAAVELEWSHSIQDFLREARESNILHPQCDEGRRRRKFERFKQCVETLGR------
3	PROSPECT2	2zf5O	0.577	0.980	6.472	threading_3	M--EKFVLSLDEGTTSARAIIFDRESNIHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQSARIEPNQIAAIGVTNQRETTLVWDK-DGKPLYNAIVWQCRRTAEMVEEIKR-EYGTMIKEKTGLVPDAYFSASKLKWLLDNVPGLREKAEKGEVMFGTVDTFLIYRLTGE--HVTDYSNASRTMLFNIKKLDWDDELLELFDIPESVLPEVRESSEVYGYTKKELL-GAEIPVSGDAGDQQAALFGQAAFEAGMVKATYGTGSFILVNTDKMVLYS-DNLLTTIAWGLNGRVSYALEGSIFVTGAAVQWLRDGIKIIKHASETEELATKLESNEGVYFVPAFVGLGAPYWDQFARGIIIGITRGTGREHLARATLEAIAYLTRDVVDEME--KLVQIKELRVDGGATANDFLMQFQADILNRKVIRPVVKETTALGAAYLAGLAVDYWADTREIAELWKAERIFEPKMDEKTRERLYKGWKEAVKRAMGWAKVVD
4	PPA-I	3h3nX	0.559	0.998	5.584	threading_4	-AEKNYVMAIDQGTTSSRAIIFDRNGKKIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESGIRPEAIAGIGITNQRETTVVWDKTTGQPIANAIVWQSRQSSPIADQLKVDGHTEMIHEKTGLVIDAYFSATKVRWLLDNIEGAQEKADNGELLFGTIDSWLVWKLTDGQVHVTDYSNASRTMLYNIHKLEWDQEILDLLNIPSSMLPEVKSNSEVYGHTRSYRFYGSEVPIAGMAGDQQAALFGQMAFEKGMIKNTYGTGAFIVMNTGEEPQLSDNDLLTTIGYGINGKVYYALEGSIFVAGSAIQWLRDGLRMIETSPQSEELAAKAKGDNEVYVVPAFTGLGAPYWDSEARGAVFGLTRGTTKEDFVRATLQAVAYQSKDVIDTMKKDSGIDIPLLKVDGGAAKNDLLMQFQADILDIDVQRAANLETTALGAAYLAGLAVGFWKDLDELKSMAEEGQMFTPEMPAEERDNLYEGWKQAVAATQTFKFKAK
5	HHPRED-l	2d4w_A	0.531	0.990	3.877	threading_5	---ADYVLAIDQGTTSSRAIVFDHSGEIYSTGQLEHDQIFPRAGWVEHNPEQIWNNVREVVGLALTRGNLTHEDIAAVGITNQRETAVVWDKTTGKPVYNAIVWQDTRTQKIVDELGGDEGAEKYKSIVGLPLATYFSGPKIKWILDNVEGAREKAEKGDLLFGNTDTWVLWNMTGGGVHVTDVTNASRTMLMDLDTLSWREDIAADMGIPLSMLPDIRSSSEVYGHGRPR-GLVPGVPIAGILGDQQAATFGQACFEVGQAKNTYGTGNFLLLNTGTEKVMSKNGLLTTVYKIGDAPAVYALEGSIAVTGSLVQWLRDNLGMFEDAPDVEWLAGKVQDNGGAYFVPAFSGLFAPYWRPDARGALVGLTRYVNRNHIARAALEATAFQSREVVDAMNADSGVDLTELRVDGGMVANELLMQFQADQLGVDVVRPKVAETTALGAAYAAGIAVGFWKGEQDVIDNWAEDKRWSPSMESGERERLYRNWKKAVTKTMEWVDED-
6	HHPRED-g	2dpn_A	0.510	0.980	3.388	threading_6	-----FLLALDQGTTSSRAILFTLEGRPVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREVLRRAGAEAGEVLALGITNQRETTLLWDRKTGKPLHNAIVWQDRRTTPLCEALRAKGLEPLFRERTGLLFDPYFSGTKLVWLLENVPGLKARAEGGGVAFGTVDTWLIWNLTGGKVHATDPTNASRTLLFNLHTLAWDPELLEALGIPAALLPEVRPSDGDFGETLPE-LLGAPVPIRGVLGDQQAALFGQAALGGGEGKCTYGTGAFLLLNTGKRPVLSEKGLLATVAWSLGGRATYALEGSLFVAGAAVGWLKEVGL-IRESAEVEALAASVEDTGDVYFVPAFTGLGAPYWDPYARGTLLGLTRGTSRAHLARAALEGVAFQVRDVVLAMEEEAGVRLKVLKADGGMAQNRLFLKIQADLLGVPVAVPEVTETTALGAALMAGVGAGALSP-EDVAGRFREAERFLPTMPEGRREALYRRWREAVERAKGWARE--
7	SP3	3kzba	0.198	0.954	6.572	threading_7	LA--FYIATFDIGTTEVKAALADRDGGLHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWW-QSGVDARRVSAIVLSGQQNFLPLD--QDHEPLHRAVLYSDKRPLKEAEEINARHGADNLWSALENPTAAS-ILPKLVFWRASFPQAFGRL--RHVVLGA-KDYVVLRLTG--RHATDRTNASTTGLYRPKDDAWHVELLADYGFSLDLPRLLEPGEQVGGVSALATGFVSGTPVLCGLGDAGAATLGVGVLDDEDAYLHLGTTGWLARLTQTDPVGDPVGTIFRLAGIIAG--KTLQVAPVLNAGNILQWALTLVGHRPGEDCAEYFHAGVTVPDGLLFVPYLHAERCPVELPAPRGALLGVTGATTRAQILLAVLEGAALSLRWCAELL----GEKVGLLKVVGGGARSEAWLRIADNLNVSLLVKPDAHLHPLRGLAALAAVELEWSHSIQDFLREARESNILHPQCDEGRRRRKFERFKQCVETLGR------
8	SAM-T99	3ezwG	0.998	0.992	4.794	threading_8	-TEKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITNQRETTIVWEKETGKPIYNAIVWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRGELLFGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQTNIDGKGGTRIPISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMKLINDAYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQEKAVIEREFRPGIETTERNYRYAGWKKAVKRAMAWEE---
9	MUSTER	3h3nX	0.559	0.998	3.897	threading_9	-AEKNYVMAIDQGTTSSRAIIFDRNGKKIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESGIRPEAIAGIGITNQRETTVVWDKTTGQPIANAIVWQSRQSSPIADQLKVDGHTEMIHEKTGLVIDAYFSATKVRWLLDNIEGAQEKADNGELLFGTIDSWLVWKLTDGQVHVTDYSNASRTMLYNIHKLEWDQEILDLLNIPSSMLPEVKSNSEVYGHTRSYRFYGSEVPIAGMAGDQQAALFGQMAFEKGMIKNTYGTGAFIVMNTGEEPQLSDNDLLTTIGYGINGKVYYALEGSIFVAGSAIQWLRDGLRMIETSPQSEELAAKAKGDNEVYVVPAFTGLGAPYWDSEARGAVFGLTRGTTKEDFVRATLQAVAYQSKDVIDTMKKDSGIDIPLLKVDGGAAKNDLLMQFQADILDIDVQRAANLETTALGAAYLAGLAVGFWKDLDELKSMAEEGQMFTPEMPAEERDNLYEGWKQAVAATQTFKFKAK
10	SPARKS	3ll3a	0.225	0.940	6.438	threading_10	---SLKYIIGDVGTTATKGVLYDINGKAVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQKID---GKIAAISWSSQH--SLIGLGSDDELLTNSITWADNCAKSIVQDAKNRGFAQQIYRKTGPHPA---PIYKLLWLKNKKTEVFSQAQK----WIGIKEYIIFRLTGK--LVTD-TTAAGTGILNLKTLTWDQELLDILKIKKEQLPKIAQPTKVIFPIKTKLGIDSDTKIILGASDGYLSTIGVNAIDSDHCALNVGTSGAIRTIVDQPKIDPSASYFCYPAD----KTHYLLGGPVNNGGIVFNWARQTLFDADTPQDFLDVAQTAPGSRNLIFLPYLGGERAPIWDANARGSFVGLTRHQK--PEARAVIEGIIFNLYDAASNLIKNTK-KPVAINATGGFLKSDFVRQLCANIFNVPIVTKE--QQSGTLAAFLARQALGLNQDLSEIGQFAQADKVYFPNPKYQKLFPLYCEIRNALAASYGKFS---

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.607 to 1huxA TM-score=0.941 to native SCOP code=c.55.1.5	TM-score=0.624 to 1huxA TM-score=0.965 to native SCOP code=c.55.1.5	TM-score=0.548 to 2aa4A TM-score=0.804 to native SCOP code=c.55.1.10	TM-score=0.628 to 1huxA TM-score=0.963 to native SCOP code=c.55.1.5	TM-score=0.624 to 1huxA TM-score=0.965 to native SCOP code=c.55.1.5

Experimental Structure

Download 1glfY

SCOP code=c.55.1.5