Template-based Modeling Results for PTXB_ECOLI


  Submitted Primary Sequence

>Length 161
MFSNHADMMLTQIAIGLCFTLLYFVVFRTLILQFNMCTPGREDAEVKLYSKAEYKASRGQTTAAEPKKELDQAAGILQALGGVGNISSINNCATRLRIALHDMSQTLDDEVFKKLGAHGVFRSGDAIQVIIGLHVSQLREQLDSLINSHQSAENVAITEAV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MFSNHADMMLTQIAIGLCFTLLYFVVFRTLILQFNMCTPGREDAEVKLYSKAEYKASRGQTTAAEPKKELDQAAGILQALGGVGNISSINNCATRLRIALHDMSQTLDDEVFKKLGAHGVFRSGDAIQVIIGLHVSQLREQLDSLINSHQSAENVAITEAV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCHHHCCEEEEEEEECCCHHCCHHHHHHCCCCEEEEECCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MFSNHADMMLTQIAIGLCFTLLYFVVFRTLILQFNMCTPGREDAEVKLYSKAEYKASRGQTTAAEPKKELDQAAGILQALGGVGNISSINNCATRLRIALHDMSQTLDDEVFKKLGAHGVFRSGDAIQVIIGLHVSQLREQLDSLINSHQSAENVAITEAV
44322112100000000000000000010000201020113331322112212132232322223333122000000210101100210300000000202122321233003311010002223000000012022013101300423322332223434
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMFSNHADMMLTQIAIGLCFTLLYFVVFRTLILQFNMCTPGREDAEVKLYSKAEYKASRGQTTAAEPKKELDQAAGILQALGGVGNISSINNCATRLRIALHDMSQTLDDEVFKKLGAHGVFRSGDAIQVIIGLHVSQLREQLDSLINSHQSAENVAITEAV
1MUSTER3bp3A0.3420.4911.987threading_1-------------------------------------------------------------------TGTSEAPALVAAFGGKENITNLDACITRLRVSVADVSKV-DQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEDEYIRN--------------
2SPARKS1iba_0.3590.4842.321threading_2-----------------------------------------------------------------------MAPALVAAFGGKENITNLDACITRLRVSVADVSK-VDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEMDEYIRNFG-----------
3PROSPECT21iba_0.3720.4841.530threading_3M-----------------------------------------------------------------------APALVAAFGGKENITNLDACITRLRVSVADVSK-VDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEMDEYIRNFG-----------
4PPA-I3bp3A0.3420.4913.544threading_4-------------------------------------------------------------------TGTSEAPALVAAFGGKENITNLDACITRLRVSVADVSK-VDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEDEYIRN--------------
5HHPRED-l3bp3_A0.3160.4915.764threading_5------------------------------------------------------------------TGTSE-APALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKL-GAAGVVVAGSGVQAIFGTKSDNLKTE-DEYIRN-------------
6HHPRED-g3bp3_A0.3540.4915.379threading_6------------------------------------------------------------------TGTSE-APALVAAFGGKENITNLDACITRLRVSVADVSK-VDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTE-DEYIRN-------------
7SP31iba_0.3590.4842.408threading_7-----------------------------------------------------------------------MAPALVAAFGGKENITNLDACITRLRVSVADVSK-VDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEMDEYIRNFG-----------
8SAM-T991ibaA0.3590.4844.294threading_8-----------------------------------------------------------------------MAPALVAAFGGKENITNLDACITRLRVSVADVSKV-DQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEMDEYIRNFG-----------
9MUSTER1ibaA0.3590.4841.884threading_9-----------------------------------------------------------------------MAPALVAAFGGKENITNLDACITRLRVSVADVSKV-DQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEMDEYIRNFG-----------
10SPARKS3ipja0.2580.5782.240threading_10---------------------------------------------------------------SNANKYNKIANELIKIIG-EDNIISITHCATRLRVMVKDREI-INDKKVEKVEVKGVFFTSGQYQIILGTGVNKVYAEVEKMGLKTLSKKEQDEL---

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.490 to 1f9nB
SCOP code=a.4.5.3
TM-score=0.491 to 1b4aA
SCOP code=a.4.5.3
TM-score=0.729 to 1ibaA
SCOP code=d.95.1.1
TM-score=0.673 to 1ibaA
SCOP code=d.95.1.1
TM-score=0.491 to 1b4aA
SCOP code=a.4.5.3