Template-based Modeling Results for HCAF_ECOLI


  Submitted Primary Sequence

>Length 172
MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTMRTTVNAQTRDRRKGVQPPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNCQISETDIPNVFAVRVNYLLYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQAVITSHNLSVLF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTMRTTVNAQTRDRRKGVQPPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNCQISETDIPNVFAVRVNYLLYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQAVITSHNLSVLF
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEECCCCCEEEEEEECEEEEEECCCCEEEEEEEEEEEEECCCCCEEEEEEEEEEEEEEECCCEEEEEEEEEEECCCCCCCCCCEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTMRTTVNAQTRDRRKGVQPPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNCQISETDIPNVFAVRVNYLLYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQAVITSHNLSVLF
5533222311120020002001101222032003001320101011222232333432232210000021131012001202221000222301010000001012134332010100000010233332100000100201113332020111100022111113200001
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTMRTTVNAQTRDRRKGVQPPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNCQISETDIPNVFAVRVNYLLYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQAVITSHNLSVLF
1MUSTER1wqlB0.3661.0002.745threading_1PEMPVSLELQNAVEQFYYREAQLLDYQNYEAWLALLTQDIQYWMPIRTTHTSRNKAMEVPPGGNAHFDETYESMRARIRARVSGLNWTEDPPSRSRHIVSNVIVRETESAGTLEVSSAFLCYRNRLERMTDIYVGERRDILLRVSDGGFKIAKRTILLDQSTITANNLSQFF
2SPARKS2b1xb0.3290.9714.552threading_2---RVSDTTVREITEWLYMEAELLDAGKYREWLALVTEDLSYVVPIRVTRERE--AVTDVVEGMTHMDDDADSMEMRVLRLETEYAWAEDPPSRSRHFVTNVRVATGDSEDEFKVTSNLLLYRTRGDVATYDVLSGERTDVLRRAGDSFLMAKRVVLLDQTTIMTHNLALIM
3PROSPECT23gzxB0.3841.0003.206threading_3MAKPVSLELQHQVEQFYYREAQLLDHHAFQAWFALLAEDIHYWMPIRTVRTAREQGLEVPAGANAHFDDTHATMYGRIRQKTSDLNWAEDPPSRTRHLVSNVIVREMDTPGTLEVASAFLLYRSRLERQVDVFAGERRDVLRIADNPGFQIAKRTIILDQSTVLANNLSVFF
4PPA-I2b1xB0.3290.9715.899threading_4---RVSDTTVREITEWLYMEAELLDAGKYREWLALVTEDLSYVVPIRVTRERE--AVTDVVEGMTHMDDDADSMEMRVLRLETEYAWAEDPPSRSRHFVTNVRVATGDSEDEFKVTSNLLLYRTRGDVATYDVLSGERTDVLRRAGDSFLMAKRVVLLDQTTIMTHNLALIM
5HHPRED-l1uli_B0.3060.9884.451threading_5KPAPVDPSLQHEIEQFYYWEAKLLNDRRFQEWFDLLAEDIHYFMPIRTTRIMRETAQESGAREYAHFDDNAQMMRGRLRKITSDVSWSENPASRTRHVISNVMIVDGEKPGEYHVSSVFIVYRNRLERQLDIF-AGERKDILRRTGAGFELAKRTILIDQSTILSNNLSFF-
6HHPRED-g1uli_B0.3100.9944.415threading_6KPAPVDPSLQHEIEQFYYWEAKLLNDRRFQEWFDLLAEDIHYFMPIRTTRIMRETAEYSGAREYAHFDDNAQMMRGRLRKITSDVSWSENPASRTRHVISNVMIVDGEKPGEYHVSSVFIVYRNRLERQLDIF-AGERKDILRRTGSGFELAKRTILIDQSTILSNNLSFFF
7SP32gbwb0.2780.9834.264threading_7-QIPVTPDVHYDIEAHYRAEVRMFQTGQYREWLQMVAEDIHYWMPIYEQRLTRDRRPDPTPDDAAIYNDDFGELKQRVERLYSGQVWMEDPPSKIRYFVSNVEAFEAG-NGELDVLSNILVYRNRRQT-EVTVHTLGREDKLRRDGNGFKVFRRKLILDARVTQDKNLYFFC
8SAM-T993en1B0.3201.0004.968threading_8KPAPVAPELQHEVEQFYYWEAKLLNDRRFEEWFALLAEDIHYFMPIRTTRIMRDSLEYSGSREYAHFDDDATMMKGRLRKITSDVSWSENPASRTRHLVSNVMIVGAEAEGEYEISSAFIVYRNRLERQLDIFAGERRDTLRRNTSEGFEIVNRTILIDQSTILANNLSFFF
9MUSTER2b1xB0.3290.9712.733threading_9---RVSDTTVREITEWLYMEAELLDAGKYREWLALVTEDLSYVVPIRVTRERE--AVTDVVEGMTHMDDDADSMEMRVLRLETEYAWAEDPPSRSRHFVTNVRVATGDSEDEFKVTSNLLLYRTRGDVATYDVLSGERTDVLRRAGDSFLMAKRVVLLDQTTIMTHNLALIM
10SPARKS2gbwb0.2780.9834.524threading_10-QIPVTPDVHYDIEAHYRAEVRMFQTGQYREWLQMVAEDIHYWMPIYEQRLTRDRRPDPTPDDAAIYNDDFGELKQRVERLYSGQVWMEDPPSKIRYFVSNVEAFEAG-NGELDVLSNILVYRNRRQT-EVTVHTLGREDKLRRDGNGFKVFRRKLILDARVTQDKNLYFFC

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.967 to 1wqlB
SCOP code=d.17.4.4
TM-score=0.980 to 2b1xB
SCOP code=d.17.4.4
TM-score=0.958 to 2b1xB
SCOP code=d.17.4.4
TM-score=0.935 to 1wqlB
SCOP code=d.17.4.4
TM-score=0.958 to 2b1xB
SCOP code=d.17.4.4