Template-based Modeling Results for LEP4_ECOLI

Submitted Primary Sequence

>Length 225
MTMLLPLFILVGFIADYFVNAIAYHLSPLEDKTALTFRQVLVHFRQKKYAWHDTVPLILCVAAAIACALAPFTPIVTGALFLYFCFVLTLSVIDFRTQLLPDKLTLPLLWLGLVFNAQYGLIDLHDAVYGAVAGYGVLWCVYWGVWLVCHKEGLGYGDFKLLAAAGAWCGWQTLPMILLIASLGGIGYAIVSQLLQRRTITTIAFGPWLALGSMINLGYLAWISY
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTMLLPLFILVGFIADYFVNAIAYHLSPLEDKTALTFRQVLVHFRQKKYAWHDTVPLILCVAAAIACALAPFTPIVTGALFLYFCFVLTLSVIDFRTQLLPDKLTLPLLWLGLVFNAQYGLIDLHDAVYGAVAGYGVLWCVYWGVWLVCHKEGLGYGDFKLLAAAGAWCGWQTLPMILLIASLGGIGYAIVSQLLQRRTITTIAFGPWLALGSMINLGYLAWISY
CCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTMLLPLFILVGFIADYFVNAIAYHLSPLEDKTALTFRQVLVHFRQKKYAWHDTVPLILCVAAAIACALAPFTPIVTGALFLYFCFVLTLSVIDFRTQLLPDKLTLPLLWLGLVFNAQYGLIDLHDAVYGAVAGYGVLWCVYWGVWLVCHKEGLGYGDFKLLAAAGAWCGWQTLPMILLIASLGGIGYAIVSQLLQRRTITTIAFGPWLALGSMINLGYLAWISY
441010000000000200010000101323231201132001104342010020010000000000011010110000000000000000000103131022200000000000000110212011000000000000000000000003230112000100000000000110000000000000000000111333222200100000000000000210022
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTMLLPLFILVGFIADYFVNAIAYHLSPLEDKTALTFRQVLVHFRQKKYAWHDTVPLILCVAAAIACALAPFTPIVTGALFLYFCFVLTLSVIDFRTQLLPDKLTLPLLWLGLVFNAQYGLIDLHDAVYGAVAGYGVLWCVYWGVWLVCHKEGLGYGDFKLLAAAGAWCGWQTLPMILLIASLGGIGYAIVSQLLQRRTITTIAFGPWLALGSMINLGYLAWISY
1	PROSPECT2	3a0oA3	0.076	1.000	1.279	threading_1	GLWRQMYIDCQEVIYAIRHLAIAGRVLGRDDLLAVAAWDTKGATSRAYNDEAGFRVVVALAWGYDWLYDHLSEDERRTVRSVLLERTREVADHVIAHARIHHAVRSLSAVLTPACIALQGESDEAGEWLDYTVGMAYLIEAANLIRSYIGYDLYQRPFFQNTGRFPLYTGLKLGYNVRQFAGVTHYQWYFDHIKADATGTEMAFYNYGWWDLNFDDLVYRHDYPQ
2	HHPRED-l	3s0x_A	0.162	0.604	2.266	threading_2	--------------------------------------------------------------------------SGS-EYIIGALGLIIASVQD----EIEDYIWIFLAVFGVLFAIYSSITLDYSILINSISGFVICFILGY-----FLSG-IGGGDGK-LIGLGALTSLGTFPI-VFIGIFF-VFLPFVILFRNGAPKPQIPLIIPITLSYLVTPIIGDRIL-
3	HHPRED-g	3s0x_A	0.167	0.613	4.755	threading_3	------------------------------------------------------------------------SGS--IEYIIGALGLIIASVQD----EIEDYIWIFLAVFGVLFAIYSSITLDYSILINSISGFVICFILGY-----FLSG-IGGGDGK-LIGLGALTSLGTFPI-VFINGIF-VFLPFVILFNGAKNETQIPLIIPITLSYLVTPIIGDRILD
4	PROSPECT2	1ezfa	0.068	0.973	1.253	threading_4	NSLMRNAVCIFYLVLRALDTLE--DDMTISHNFHSFLYQPDWRFMESKEKDRQVLEDFPTISLEFR----NLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRQEVWSRYVKKLGDFAIPDVITYLSRLRNQSVFNFCAIPQVMAIATLAACYNNKGAVKIDATNMPAVKAIIYQYMEEIYHN
5	PROSPECT2	1hzfa	0.092	0.964	1.240	threading_5	IYLAPTLAASRYLDKTDLIQKGYMRIQQFRKA-----DGSYAAWLSRDSSTWLTAFVLKVLSLAQEQVGGSPEKLQETSNWLLSQPVLDRSQGGLVGN--DETVALTAFVTIALHHGLAVFQDEGAEPLKQRVEASISKASSFLGEKASA-GLLGAHAAAITAYALTLTKAPADLRGVAHLWIETTAYALLHLLLHEGKAEADQASAWLVIALDALSAYWIASHT
6	PROSPECT2	2fozA	0.116	1.000	1.239	threading_6	MASLRFRGCLAGALLGDCVGSFYEAHDTVDLTSVLRHVQSLEPDPEALYYTDDTAMARALVQSLLAKEAFDEVDMAHRFAQEYKKDVQKFARLSAQLTHASSLGYNGAILQALAVHLALQGESSSEHFLKQLLGHMELEGDAQSVLDARELGMEERPYSSRLKKIGELLDQASVTREEVVSELVPTAIYCFLRCMEPDPEIPSAFNSLQTIATMAGAIAGAYYGM
7	PROSPECT2	3g9dA	0.087	0.969	1.215	threading_7	SIRSRALGAYLGLACGDALGATVEFLTKYGVHKHIKGGGWLKLPAGQVTDDTEMSIHLGRAIAAEEFAVVDVGDTTRRGIRRFIMAFERWTVEQAHITHCNAMSDAATLTLGHMVRRLVLGGDVRDVRDESNKLIAIVDTMQTVMHYY-----FQTDSVESCVVETVNQGGDADTTGAIAGMLAGATYGVET--IPPRWLRKLDRDVYNEICAQVDGLLARAPAL
8	MUSTER	1pw4A2	0.099	0.849	0.817	threading_8	WYIAIANVFVYLLRYGILDWSPTY----LKEVKHFALDKS-----SWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLG---GSV-AASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEQLLQELVP---------------------
9	SPARKS	2xwub	0.129	0.929	0.961	threading_9	MFTIGALSEWLPVMINSVLPLVLHALPELSVSSVSTLKKICRECMKQIHKTSQCMWLMQALGFLLSA--LQVEEILKNLHSLISPYIQQLEKLA-EEIPNPSNKLAIVHILGLLSNLFTTLDISHPN-----PVVVVLQQVFQLIQKVLSKWL---NDAQVVEAVCAIFEKSVKTLLDDFAPMVPQLCEMLGRMYSTIPQA-----SALDLTRQLVHIFAHEPAH
10	PROSPECT2	2evuA	0.101	0.924	1.211	threading_10	MVTFILVFFGAGSAAVTLMI---------ASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYAFPGREVVPYIIAQLLGAAFGSFIFLQCAG------IGAATVGGLGATAPFPGISYWQAMLAEVVGTFLL--MITIMGIAVDERAPKGFAGIIIGLTVAGIITTLGNISGSPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYLTS

Predicted Tertiary Structure


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TM-score=0.850 to 1pw4A SCOP code=f.38.1.1	TM-score=0.575 to 1fp3A SCOP code=a.102.1.3	TM-score=0.423 to 1nlxN SCOP code=a.24.17.1	TM-score=0.431 to 1nlxN SCOP code=a.24.17.1	TM-score=0.467 to 1lrzA SCOP code=a.2.7.4