Template-based Modeling Results for HOFM_ECOLI

Submitted Primary Sequence

>Length 259
MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAWRDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDPWEAVSVRQPPLPPPGGDFAIALGLALGKAY
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAWRDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDPWEAVSVRQPPLPPPGGDFAIALGLALGKAY
CCCCCCEEEEEECCCEEEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAWRDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDPWEAVSVRQPPLPPPGGDFAIALGLALGKAY
5433111100002321000000132253000110010103420123131220320030012005403320100000122210011011132212331111101010231020213201000021132210000001131021002003405020100102000001002102332000001122100001312102311111210320011011323201100301000110012210201311010000000011424
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAWRDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDPWEAVSVRQPPLPPPGGDFAIALGLALGKAY
1	MUSTER	2ychA	0.185	0.958	1.383	threading_1	--PRVEALGLEIGASALKLVEVSGNPP--ALKALASRPTPPGLLEG--VAEPAALAQEIKELLLEATRKRYVVTALSNLAVILRPIQVPKPL----KEEEAVRWEAERYIPFPIE-VVLDFAPLTPLSVQVVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARPDRVFLVLDIGAESLVLLRGDTYGRIYDAIRPVLVELTQELRLSPEVGYLLGGGSVNPWEAVAVDPKRFESIGPEFAVALGLALRGVE
2	SPARKS	2ycha	0.185	0.958	3.233	threading_2	--PRVEALGLEIGASALKLVEV--SGNPPALKALASRPTPPGLLEG--VAEPAALAQEIKELLLEARRKRYVVTALSNLAVILRPIQVPKPL----KEEEAVRWEAERYIPFPIE-VVLDFAPLEGEQVQVVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARPDRVFLVLDIGAEKPLAVRVLTLSRSFNLDLLALVELTQELRLSPEVGYLLGGGSVNPWEAVAVDPKRFEEIGPEFAVALGLALRGVE
3	PROSPECT2	2ychA	0.165	0.958	2.104	threading_3	PRVEA--LGLEIGASALKLVEVS--GNPPALKALASRPTPPGLLEG--VAEPAALAQEIKELLLEARTRKYVVTALSNLAVILRPIQVPKPLKEEEA----VRWEAERYIPFPIE-VVLDFAPQEGEQVQVVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAEESLVLLRGDKPLAVRLDLLAAEEVKRTYGRIYDAIRPVQLSPEVGYLLGGGSVNPWEAVAVDPKRFESEQLQFAVALGLALRVEP
4	PPA-I	2ychA1	0.122	0.568	2.955	threading_4	--PRVEALGLEIGASALKLVEVSGNPP--ALKALASRPTPPGLLEG--VAEPAALAQEIKELLLEARRKRYVVTALSNLAVILRPIQVPKPLKE----EEAVRWEAERYIPFPIE-VVLDFAPLTPLSVQVVAAARQEAVAGVLEALRGAGLVPVVLD-----------------------------------------------------------------------------------------------------
5	HHPRED-l	2ych_A	0.192	0.927	7.298	threading_5	--PRVEALGLEIGASALKLVEVS--GNPPALKALASRPTPPGLL-EG-VAEPAALAQEIKELLLEATRKRYVVTALSNLAVILRPIQVPK---PLKE-EEAVRWEAERYIPFPI-EVVLDFAPLTPLVQV-VAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARPDRVFLVLDIGAEKPLAVRVLTLSGKYG----RIYDARRSL--SPEVGYLLGGGSKLRWEAVAVDPKQLQEIGPEFAVALGLALRGV-
6	HHPRED-g	2ych_A	0.192	0.946	6.814	threading_6	--PRVEALGLEIGASALKLVEVS--GNPPALKALASRPTPPGLL-EG-VAEPAALAQEIKELLLEARRKRYVVTALSNLAVILRPIQVPK---PLKE-EEAVRWEAERYIPFPI-EVVLDFAPLTPLVQV-VAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLPDRVFLVLDIGAESTSLVLLRGDKPLAVRVLTLSGARRSL--SPEVGYLLGGGSVNPWEAVAVDPEQLQEIGPEFAVALGLALRGVE
7	SP3	2ycha	0.181	0.958	2.982	threading_7	--PRVEALGLEIGASALKLVEVS--GNPPALKALASRPTPPGLLEG--VAEPAALAQEIKELLLEATRKRYVVTALSNLAVILRPIQVPKPL----KEEEAVRWEAERYIPFPIE-VVLDFAPLTPEQVQVVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARPDRVFLVLDIGAEGKDFTEAIARSFNLDLLAAELVELTQELRLSPEVGYLLGGGSVNPWEAVAVDPKRFEEIGPEFAVALGLALRGVE
8	SAM-T99	2ychA	0.192	0.927	2.920	threading_8	--PRVEALGLEIGASALKLVEV--SGNPPALKALASRPTPPGLLEGVA--EPAALAQEIKELLLEARTRKRVVTALSNLAVILRPIQVPK-PLKEEEAVRW---EAERYIPFPI-EVVLDFAPLTPLSVQVVAAARQEAVAGVLEALRGAGLVPLDVKPFAGLYPLEA--------RLAEEPDRVFLVLDIGAESTSLVLLRGDKPLALRGLASLLTDTLGVNLEPVNPWEAVAVDPKQLQEIGPEFAVALGLALRGVE
9	MUSTER	2ychA1	0.122	0.568	1.277	threading_9	--PRVEALGLEIGASALKLVEVSGNPP--ALKALASRPTPPGLLEG--VAEPAALAQEIKELLLEATRKRYVVTALSNLAVILRPIQVPKPL----KEEEAVRWEAERYIPFPIE-VVLDFAPLTGEQVQVVAAARQEAVAGVLEALRGAGLVPVVLD-----------------------------------------------------------------------------------------------------
10	SPARKS	1e4ft	0.091	0.981	1.918	threading_10	---TVFYTSIDIGSRYIKGLVLGKRDQEWEALAFSSVK--SRGLDEGEIKDAIAFKESVNTLLKELSLRSDFVISFSSVSFEREDTVIEKRSITLDILSEMQSEALEKLKENGLHIFSKRYLLDDERIEYTSIVVPLKVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVTPEKDRGVVVVNLGYNIKISYVPVDVSAVLDTSFEESERLIITHDLKEEEIQYRGLDGMSKSKKFFREVEAKIGIPGGVVLTGGGAKIPRI

Predicted Tertiary Structure


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TM-score=0.645 to 1yf5L SCOP code=c.55.1.11	TM-score=0.646 to 1yf5L SCOP code=c.55.1.11	TM-score=0.645 to 1e4gT SCOP code=c.55.1.1	TM-score=0.641 to 1yf5L SCOP code=c.55.1.11	TM-score=0.552 to 1yf5L SCOP code=c.55.1.11