Template-based Modeling Results for CYBH_ECOLI


  Submitted Primary Sequence

>Length 235
MQQKSDNVVSHYVFEAPVRIWHWLTVLCMAVLMVTGYFIGKPLPSVSGEATYLFYMGYIRLIHFSAGMVFTVVLLMRIYWAFVGNRYSRELFIVPVWRKSWWQGVWYEIRWYLFLAKRPSADIGHNPIAQAAMFGYFLMSVFMIITGFALYSEHSQYAIFAPFRYVVEFFYWTGGNSMDIHSWHRLGMWLIGAFVIGHVYMALREDIMSDDTVISTMVNGYRSHKFGKISNKERS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQQKSDNVVSHYVFEAPVRIWHWLTVLCMAVLMVTGYFIGKPLPSVSGEATYLFYMGYIRLIHFSAGMVFTVVLLMRIYWAFVGNRYSRELFIVPVWRKSWWQGVWYEIRWYLFLAKRPSADIGHNPIAQAAMFGYFLMSVFMIITGFALYSEHSQYAIFAPFRYVVEFFYWTGGNSMDIHSWHRLGMWLIGAFVIGHVYMALREDIMSDDTVISTMVNGYRSHKFGKISNKERS
CCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEECCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MQQKSDNVVSHYVFEAPVRIWHWLTVLCMAVLMVTGYFIGKPLPSVSGEATYLFYMGYIRLIHFSAGMVFTVVLLMRIYWAFVGNRYSRELFIVPVWRKSWWQGVWYEIRWYLFLAKRPSADIGHNPIAQAAMFGYFLMSVFMIITGFALYSEHSQYAIFAPFRYVVEFFYWTGGNSMDIHSWHRLGMWLIGAFVIGHVYMALREDIMSDDTVISTMVNGYRSHKFGKISNKERS
5544332221110010001000000000000000000000211111112110000001010000000000000000000000014222110100211232002000100100000233122310100000000000000000000000001122131111000100020011112201100000300000000000000000002112233210000011020232232244347
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMQQKSDNVVSHYVFEAPVRIWHWLTVLCMAVLMVTGYFIGKPLPSVSGEATYLFYMGYIRLIHFSAGMVFTVVLLMRIYWAFVGNRYSRELFIVPVWRKSWWQGVWYEIRWYLFLAKRPSADIGHNPIAQAAMFGYFLMSVFMIITGFALYSEHSQYAIFAPFRYVVEFFYWTGGNSMDIHSWHRLGMWLIGAFVIGHVYMALREDIMSDDTVISTMVNGYRSHKFGKISNKERS
1MUSTER1kqfC0.1870.8431.251threading_1--SKSK---MIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQWLTQT--FGTPQMGRILHPFFGIAIFVALMFMFVRFVHHN----------IPDKK--IPWLLNIVEVLKGNEHKVADVGYNAGQKMMFWSIMSMIFVLLVTGVIIWRPYFAQ-------------YFPMQVVRYSLLIHAAAGIILIHAILIHMYMAFWV-----KGSIKGMIEGKVSRREKAEAKKESE
2SPARKS1kqfc0.1710.8471.011threading_2-----SKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQWLTQTFGT--PQMGRILHPFFGIAIFVALMFMFVRF------VHHN----IPDKKDIPWLLN-IVEVLKGNEHKVADVGKNAGQKMMFWSIMSMIFVLLVTGVIIWRPYF-------------AQYFPMQVVRYSLLIHAAAGIILIHAILIHMYMAFW-----VKGSIKGMIEGKVSRRWREIEKAEAK
3PROSPECT23a0oA30.0440.9701.337threading_3WLNSEQ-------LSAFADAVAKHCGWAEFYEKSVEPWLERPVMPEPQPYPRQMYIDCQEVIYAIRHLAIAGRVSRKWLLAVAAWDTKGADWLYDHLSEDERRTVRSVLLERTVIAHARIHVFPYDSHAVRSLSAVLTPACIWLDYTVEFLATLYSPWMAYLIEAANLIRSYIGYDLYQRPFFQNTGRFPLLGYNVRQFAGVTIKADATGTEMAFYNYGWWHDYPQVEAVSADLP
4PPA-I1kqfC0.1470.8091.583threading_4-----SKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQWLTQTFGT--PQMGRILHPFFGIAIFVALMFMFVRFVHHN----------IPDKKDIPWLLNIVEVLKGNEHKVADVGKYNAGQKMMFWSIMSMIFVLLVTGVIIWRPYFAQYF-------------PMQVVRYSLLIHAAAGIILIHAILIHMYMAFWV-----KGSIKGMIEGKVS----------RR
5HHPRED-l1kqf_C0.1310.8477.470threading_5-----SKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQWLTQTF--GTPQMGRILHPFFGIAIFVALMFMFVRFVHHNIPDK----------KDIPWLLNIVEVLKGNEHKVADVGKYNAGQKMMFWSIMSMIFVLLVTGVIIWRPYFAQY-------------FPMQVVRYSLLIHAAAGIILIHAILIHMYMAFW-----VKGSIKGMIEGKVSRRWHHPRWYRE-
6HHPRED-g1kqf_C0.1460.8477.811threading_6-----SKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQWLTQ--TFGTPQMGRILHPFFGIAIFVALMFMFVRFVHHNIPDKK----------DIPWL-LNIVEVLKNEHKVADVGKYNAGQKMMFWSIMSMIFVLLVTGVIIWRPYFA----Q---------YFPMQVVRYSLLIHAAAGIILIHAILIHMYMAFW-----VKGSIKGMIEGKVSRRKHHPRWYREI
7SP31kqfc0.1910.8471.895threading_7--SKSKMIVR---TKFIDRACHWTVVICFFLVALSGISFFFPTLQWLTQ--TFGTPQMGRILHPFFGIAIFVALMFMFVRFVHHN----------IPDKKDIPWLLN-IVEVLKGNEHKVADVGYNAGQKMMFWSIMSMIFVLLVTGVIIW----RPYFAQYFP-----MQVV----RYSLLIHAAAGIILIHAILIHMYMAFW-----VKGSIKGMIEGKVWAKKREIEKAEAK
8SAM-T991kqfC0.1510.8473.335threading_8-----SKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQWLTQTFGTPQMG--RILHPFFGIAIFVALMFMFVRFVH--------HNIPDKKDIPWLNIVEVLKG---NEHKVADVGKYNAGQKMMFWSIMSMIFVLLVTGVIIWRPYF------AQYFPMQVVRYSL-------LIHAAAGIILIHAILIHMYMAFWVK-----GSIKGMIEGKVSRRWAKKHHPRWY
9MUSTER2vpyC0.1410.8720.676threading_9LPNAQE-------------FWHWTNALHFVLVGLAGGVAL---------AALLHLKGDAEARRYTLYALMLIALDLFILWAESPARFRLFLSFHPTSPGAWGLGLGFLTGGLLYLGKGSQ--------RALAWALLVFSLVALSYPGLALAVNLNRPLWNGLMAGLFPLTALVLALGLAALLKSPWALFPLRVLAGASLLLALLYPLTLPPEARGHLLAGFLLLGLGTFWQERLA
10SPARKS1pb6a0.0540.7150.726threading_10AELAGVSKTNLL--------YYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPI----DPQHLIFMIWASTQHYADFAPQVEAVTGATLRDEVFFNQTVENVQRIIIEGIRPR-------------------------------------------------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.833 to 1kqfC
SCOP code=f.21.1.1
TM-score=0.839 to 1kqfC
SCOP code=f.21.1.1
TM-score=0.813 to 1kqfC
SCOP code=f.21.1.1
TM-score=0.548 to 1j0nA
SCOP code=a.102.3.2
TM-score=0.825 to 1kqfC
SCOP code=f.21.1.1