Template-based Modeling Results for HYPB_ECOLI

Submitted Primary Sequence

>Length 290
MCTTCGCGEGNLYIEGDEHNPHSAFRSAPFAPAARPKMKITGIKAPEFTPSQTEEGDLHYGHGEAGTHAPGMSQRRMLEVEIDVLDKNNRLAERNRARFAARKQLVLNLVSSPGSGKTTLLTETLMRLKDSVPCAVIEGDQQTVNDAARIRATGTPAIQVNTGKGCHLDAQMIADAAPRLPLDDNGILFIENVGNLVCPASFDLGEKHKVAVLSVTEGEDKPLKYPHMFAAASLMLLNKVDLLPYLNFDVEKCIACAREVNPEIEIILISATSGEGMDQWLNWLETQRCA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MCTTCGCGEGNLYIEGDEHNPHSAFRSAPFAPAARPKMKITGIKAPEFTPSQTEEGDLHYGHGEAGTHAPGMSQRRMLEVEIDVLDKNNRLAERNRARFAARKQLVLNLVSSPGSGKTTLLTETLMRLKDSVPCAVIEGDQQTVNDAARIRATGTPAIQVNTGKGCHLDAQMIADAAPRLPLDDNGILFIENVGNLVCPASFDLGEKHKVAVLSVTEGEDKPLKYPHMFAAASLMLLNKVDLLPYLNFDVEKCIACAREVNPEIEIILISATSGEGMDQWLNWLETQRCA
CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCCCEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MCTTCGCGEGNLYIEGDEHNPHSAFRSAPFAPAARPKMKITGIKAPEFTPSQTEEGDLHYGHGEAGTHAPGMSQRRMLEVEIDVLDKNNRLAERNRARFAARKQLVLNLVSSPGSGKTTLLTETLMRLKDSVPCAVIEGDQQTVNDAARIRATGTPAIQVNTGKGCHLDAQMIADAAPRLPLDDNGILFIENVGNLVCPASFDLGEKHKVAVLSVTEGEDKPLKYPHMFAAASLMLLNKVDLLPYLNFDVEKCIACAREVNPEIEIILISATSGEGMDQWLNWLETQRCA
21320101322211212331131112101111112121311013113110111130102101022011021223221010112012312310320122023231000001112221100001200220342020000201130220011022120200101213001010300110023013331000001111221020123123312000011131332223112100000000001011131130203201100341133020010002213003200210232325
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MCTTCGCGEGNLYIEGDEHNPHSAFRSAPFAPAARPKMKITGIKAPEFTPSQTEEGDLHYGHGEAGTHAPGMSQRRMLEVEIDVLDKNNRLAERNRARFAARKQLVLNLVSSPGSGKTTLLTETLMRLKDSVPCAVIEGDQQTVNDAARIRATGTPAIQVNTGKGCHLDAQMIADAAPRLPLDDNGILFIENVGNLVCPASFDLGEKHKVAVLSVTEGEDKPLKYPHMFAAASLMLLNKVDLLPYLNFDVEKCIACAREVNPEIEIILISATSGEGMDQWLNWLETQRCA
1	MUSTER	2wsmA	0.399	0.700	2.868	threading_1	------------------------------------------------------------------------------------LAENKRLAEKNREALRESGTVAVNIMGAIGSGKTLLIERTIERIGNEVKIGAMLGDVVSKADYERVRRFGIKAEAISTGKECHLDAHMIYHRLKKFS--DCDLLLIENVGNLICPVDFDLGENYRVVMVSVTEGDDVVEKHPEIFRVADLIVINKVALAEAVGADVEKMKADAKLINPRAKIIEMDLKTGKGFEEWIDFLRGILN-
2	SPARKS	2hf8a	0.397	0.703	4.336	threading_2	---------------------------------------------------------------------------------KDILKANKRLADKNRKLLNKHGV-VAFDFGAIGSGKTLLIEKLIDNLKDKYKIACIAGDVIAKFDAERE-KHGAKVVPLNTGKECHLDAHLVGHALEDLNLDEIDLLFIENVGNLICPADFDLGTHKRIVVISTTEGDDTIEKHP-GIKTADLIVINKIDLADAVGADIK-KENDAKRINPDAEVVLLSLKT-EGFDKVLEFIEKSVKE
3	PROSPECT2	2wsmA	0.394	0.700	4.122	threading_3	L------------------------------------------------------------------------------------AENKRLAEKNREALRESGTVAVNIMGAIGSGKTLLIERTIERIGNEVKIGAMLGDVVSKADYERVRRFGIKAEAISTGKECHLDAHMIYHRLKKF--SDCDLLLIENVGNLICPVDFDLGENYRVVMVSVTEGDDVVEKHPEIFRVADLIVINKVALAEAVGADVEKMKADAKLINPRAKIIEMDLKTGKGFEEWIDFLRGIL-N
4	PPA-I	2wsmA	0.399	0.700	3.620	threading_4	------------------------------------------------------------------------------------LAENKRLAEKNREALRESGTVAVNIMGAIGSGKTLLIERTIERIGNEVKIGAMLGDVVSKADYERVRRFGIKAEAISTGKECHLDAHMIYHRLK--KFSDCDLLLIENVGNLICPVDFDLGENYRVVMVSVTEGDDVVEKHPEIFRVADLIVINKVALAEAVGADVEKMKADAKLINPRAKIIEMDLKTGKGFEEWIDFLRGILN-
5	HHPRED-l	2hf9_A	0.389	0.717	2.434	threading_5	---------------------------------------------------------------------------------KDILKANKRLADKNRKLLNKHGVVAFDFMGAIGSGKTLLIEKLIDNLKDKYKIACIAGDVIAKFDAERMEKHGAKVVPLNTGKECHLDAHLVGHALEDLNLDEIDLLFIENVGNLICPADFDLGTHKRIVVISTTEGDDTIEKHPGIMKTADLIVINKIDLADAVGADIKKMENDAKRINPDAEVVLLSLKTMEGFDKVLEFIEKSVK-
6	HHPRED-g	2hf9_A	0.388	0.721	2.569	threading_6	---------------------------------------------------------------------------------KDILKANKRLADKNRKLLNKHGVVAFDFMGAIGSGKTLLIEKLIDNLKDKYKIACIAGDVIAKFDAERMEKHGAKVVPLNTGKECHLDAHLVGHALEDLNLDEIDLLFIENVGNLICPADFDLGTHKRIVVISTTEGDDTIEKHPGIMKTADLIVINKIDLADAVGADIKKMENDAKRINPDAEVVLLSLKTMEGFDKVLEFIEKSVKE
7	SP3	2hf8a	0.397	0.703	4.516	threading_7	---------------------------------------------------------------------------------KDILKANKRLADKNRKLLNKHG-VVAFDFGAIGSGKTLLIEKLIDNLKDKYKIACIAGDVIAKFDAERE-KHGAKVVPLNTGKECHLDAHLVGHALEDLNLDEIDLLFIENVGNLICPADFDLGTHKRIVVISTTEGDDTIEKHP-GIKTADLIVINKIDLADAVGADIK-KENDAKRINPDAEVVLLSLKT-EGFDKVLEFIEKSVKE
8	SAM-T99	2wsmA	0.407	0.686	6.651	threading_8	------------------------------------------------------------------------------------LAENKRLAEKNREALRESGTVAVNIMGAIGSGKTLLIERTIERIGNEVKIGAMLGDVVSKADYERVRRFGIKAEAISTGKECHLDAHMIYHRLK--KFSDCDLLLIENVGNLICPVDFDLGENYRVVMVSVTEGDDVVEKHPEIFRVADLIVINKVALAEAVGADVEKMKADAKLINPRAKIIEMDLKTGKGFEEWIDFLR-----
9	MUSTER	2hf8A	0.397	0.703	2.454	threading_9	---------------------------------------------------------------------------------KDILKANKRLADKNRKLLNKHGVVAFDFG-AIGSGKTLLIEKLIDNLKDKYKIACIAGDVIAKFDAERE-KHGAKVVPLNTGKECHLDAHLVGHALEDLNLDEIDLLFIENVGNLICPADFDLGTHKRIVVISTTEGDDTIEKHPGI-KTADLIVINKIDLADAVGADIKK-ENDAKRINPDAEVVLLSLKT-EGFDKVLEFIEKSVKE
10	SPARKS	3nxsa	0.148	0.769	2.094	threading_10	---------------------------------------------------------------NVHELAQSIRDGRAITLVESTRADHREQAQQLLLDLMPESAMHVGITGVPGVGKSTTIEALGMHLIEGHRVAVLAVDRM----ARLAVHPDAYIRPSPTSGTLGGVAKATRETIVLLEAAGYDVILVETVGVGQSEVTVAGMVDTFVFLTLARTGDQLQGIKKGVLELADVIVVNKADHAVEAKAAARELSGAIRLIYPRPPVLTMSAVEGTGLPELWETVLRHREV

Predicted Tertiary Structure


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TM-score=0.568 to 1qzwA SCOP code=a.24.13.1	TM-score=0.568 to 1qzwA SCOP code=a.24.13.1	TM-score=0.565 to 1qzwA SCOP code=a.24.13.1	TM-score=0.568 to 1qzwA SCOP code=a.24.13.1	TM-score=0.564 to 1qzwA SCOP code=a.24.13.1