Template-based Modeling Results for ISPD_ECOLI

Submitted Primary Sequence

>Length 236
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
CCCCCCCEEEEEECCCCCCCCCCCCCHHHEEECCEEHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCCEEEEECCHHHHHHHHCCCEECHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
55333110000000002122232311320020130000100020023133121000001300130010011223312012203310100110031023220000010121002330012002002213200000010422011023242001211223001112122101121012002202431220011000022021201002032310300213002001101131233345
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
1	MUSTER	2xwlA	0.362	0.936	3.220	threading_1	------ATVAVVPAAGSGERLRAGRPKAFVTLGGTPLLEHALSGLRASGVIDRIVIAVPPALTDESKLVFGG-EDSVIVSGGVDRTESVALALEAAGDAEFVLVHDAARALTPPALIARVVAALKEGHSAVVPGLAPADTIKAVDA-NGAVLGTPERAGLRAVQTPQGFHADVLRRAYARATAGG--VTDDASLVEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVLAHHH-----
2	SPARKS	2xwla	0.362	0.936	5.050	threading_2	------ATVAVVPAAGSGERLRAGRPKAFVTLGGTPLLEHALSGLRASGVIDRIVIAVPPALTDESKLVFGG-EDSVIVSGGVDRTESVALALEAAGDAEFVLVHDAARALTPPALIARVVAALKEGHSAVVPGLAPADTIKAVDA-NGAVLGTPERAGLRAVQTPQGFHADVLRRAYARATAGG--VTDDASLVEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVLAHHH-----
3	PROSPECT2	2xwlA	0.357	0.936	4.481	threading_3	------ATVAVVPAAGSGERLRAGRPKAFVTLGGTPLLEHALSGLRASGVIDRIVIAVPPALTDESKLVF-GGEDSVIVSGGVDRTESVALALEAAGDAEFVLVHDAARALTPPALIARVVAALKEGHSAVVPGLAPADTIKAVDANGA-VLGTPERAGLRAVQTPQGFHADVLRRAYARATAGG--VTDDASLVEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVLAH-----HH
4	PPA-I	2xwlA	0.362	0.936	3.558	threading_4	------ATVAVVPAAGSGERLRAGRPKAFVTLGGTPLLEHALSGLRASGVIDRIVIAVPPALTDESKLVFGG-EDSVIVSGGVDRTESVALALEAAGDAEFVLVHDAARALTPPALIARVVAALKEGHSAVVPGLAPADTIKAV-DANGAVLGTPERAGLRAVQTPQGFHADVLRRAYARATAGG--VTDDASLVEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVLAHHH-----
5	HHPRED-l	1i52_A	1.000	0.953	3.104	threading_5	----HLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTR-------
6	HHPRED-g	1w55_A	0.244	0.886	3.700	threading_6	-S----EMSLIMLAAGNSTRFNTKVKKQFLRLGNDPLWLYATKNLSSFYPFKKIVVTSSN-ITYMKK----FTKNYEFIEGGDTRAESLKKALELID-SEFVMVSDVARVLVSKNLFDRLIENLDKA-DCITPALKVADTTLFDN-------EALQREKIKLIQTPQISKTKLLKKAL----DQNLEFTDDSTAIAAMGGKIWFVEGEENARKLTFKEDLKKLDLPT----PSFEI
7	SP3	2xwla	0.362	0.936	4.993	threading_7	------ATVAVVPAAGSGERLRAGRPKAFVTLGGTPLLEHALSGLRASGVIDRIVIAVPPALTDESKLVFGG-EDSVIVSGGVDRTESVALALEAAGDAEFVLVHDAARALTPPALIARVVAALKEGHSAVVPGLAPADTIKAV-DANGAVLGTPERAGLRAVQTPQGFHADVLRRAYARATAGG--VTDDASLVEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVLAHHH-----
8	SAM-T99	1i52A	1.000	0.953	5.303	threading_8	----HLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTR-------
9	MUSTER	1i52A	1.000	0.953	3.170	threading_9	----HLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTR-------
10	SPARKS	3q7ua	0.320	0.928	4.986	threading_10	-----GEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILG--HRAMIVAGGSNRTDTVNLALTVLSEPEFVLVHDAARALTPPALVARVVEALRDGYAAVVPVLPLSDTIKAVDA-NGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDE--YTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG-------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.888 to 1i52A TM-score=0.908 to native SCOP code=c.68.1.13	TM-score=0.888 to 1i52A TM-score=0.908 to native SCOP code=c.68.1.13	TM-score=0.888 to 1i52A TM-score=0.908 to native SCOP code=c.68.1.13	TM-score=0.877 to 1i52A TM-score=0.896 to native SCOP code=c.68.1.13	TM-score=0.892 to 1i52A TM-score=0.912 to native SCOP code=c.68.1.13

Experimental Structure

Download 1i52A

SCOP code=c.68.1.13