Template-based Modeling Results for KBAY_ECOLI


  Submitted Primary Sequence

>Length 286
MSIISTKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAWFAENPQGNDPRYYMRVGMDAMKEVVRNKINVCGSANRISA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSIISTKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAWFAENPQGNDPRYYMRVGMDAMKEVVRNKINVCGSANRISA
CCCCCHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHCCCEEEEECHHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSIISTKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAWFAENPQGNDPRYYMRVGMDAMKEVVRNKINVCGSANRISA
3421203100210331000000000000200200020024230100000020004102130001001100330400000001113113002300300010000100302112004002100200342400010100101123232213232221111310220033020000000000010213221401120012013104010000001302331022004001000000020110001001210332342210220022003001200221022020234234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSIISTKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAWFAENPQGNDPRYYMRVGMDAMKEVVRNKINVCGSANRISA
1MUSTER1gvfB0.9890.9623.564threading_1-SIISTKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVESAF--------LTDPQEAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAWFAENPQGNDPRYYMRVGMDAMKEVVRNKINVCGSANRI--
2SPARKS3pm6a0.3000.9795.752threading_2LKSNRALPLLTFARTHSFAIPAICVYNLEGILAIIRAAEHKRSPAMILLFPWAIQYAD-SLLVRTAASACRAASVPITLHLDHAQDPEIIKRAADPGFDSIMVDMSHFSKEENLRLTRELVAYCNARGIATEAEPGRIEGGEDGVDTVDLEGVLTTPEESEEFVA-TGINWLAPAFGNVHGNYGPRGQLDYERLQRINEAVGVGLVLHGADPFTKEIFEKCIERGVAKVNVNRAVNNEYVKVMREK----AGSLPITRLHEEVTNAMQAAVEKIMDMIDSTGKAEF
3PROSPECT23pm6A0.2960.9794.527threading_3LKSNRALPLLTFARTHSFAIPAICVYNLEGILAIIRAAEHKRSPAMILLFPWAIQYAD-SLLVRTAASACRAASVPITLHLDHAQDPEIIKRAADPGFDSIMVDMSHFSKEENLRLTRELVAYCNARGIATEAEPGRIEGGEDGVQTVDLEGVLTTPEESEEFVA-TGINWLAPAFGNVHGNYGPRGQLDYERLQRINEAERVGLVLHGADPFTKEIFEKCIERGVAKVNVNRAVNNEYVKVMREK----AGSLPITRLHEEVTNAMQAAVEKIMDMIDSTGKAEM
4PPA-I3q94A0.3880.9656.318threading_4-PLVS--KELNKALEGKYAVGQFN-NNLEWTQAILAAAEEEKSPVILGVSEGAARHTGFKTVVAVKALIEENITVPVAIHLDHGSSFEKCKEAIDAGFTSVID-ASHHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIAEG--VIYADPAECKHLVEATGIDCLAPALGSVHGPYKGEPNLGFAE-EQVRDFTGVPLVLHGGTGIPTADIEKAISLGTSKINVNTENQIEFTKAVREVLNKDQEVYDPRKFIGPGRDAIKATVIGKIREFGSNGKA--
5HHPRED-l1gvf_A1.0000.9554.895threading_5-SIISTKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLG-----------SAFLTDPQEAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAWFAENPQGNDPRYYMRVGMDAMKEVVRNKINVCGSANRIS-
6HHPRED-g3n9r_A0.3990.9554.054threading_6-MLVKGNEILLKAHKEGYGVGAFNFVNFEMLNAIFEAGNEENSPLFIQASEGAIKYMGIDMAVGMVKIMCERPHIPVALHLDHGTTFESCEKAVKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELGRLMGI----------AVLVNPKEAEQFVKESQVDYLAPAIGTSHGAFKGEPKLDFERLQEVKRLTNIPLVLHGASGVPFEFLQESVKGGINKVNTDTDLRIAFIAEVRKVANEDKSQFDLRKFFSPAQLALKNVVKERMKLLGSANKI--
7SP33pm6a0.3000.9796.241threading_7LKSNRALPLLTFARTHSFAIPAICVYNLEGILAIIRAAEHKRSPAMILLFPWAIQYADS-LLVRTAASACRAASVPITLHLDHAQDPEIIKRAADPGFDSIMVDMSHFSKEENLRLTRELVAYCNARGIATEAEPGRIEGGEDGVDTVDLEGVLTTPEESEEFVA-TGINWLAPAFGNVHGNYGPRGQLDYERLQRINEAVGVGLVLHGADPFTKEIFEKCIERGVAKVNVNRAVNNEYVKVMREK----AGSLPITRLHEEVTNAMQAAVEKIMDMIDSTGKAEF
8SAM-T991gvfB0.9930.9625.549threading_8-SIISTKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVESA--------FLTDPQEAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAWFAENPQGNDPRYYMRVGMDAMKEVVRNKINVCGSANRI--
9MUSTER3q94A0.3890.9623.489threading_9-PLVS--KELNKALEGKYAVGQFN-NNLEWTQAILAAAEEEKSPVILGVSEGAARHTGFKTVVAVKALIEENITVPVAIHLDHGSSFEKCKEAIDAGFTSVI--ASHHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIAEG--VIYADPAECKHLVEATGIDCLAPALGSVHGPYKGEPNLGFAE-EQVRDFTGVPLVLHGGTGIPTADIEKAISLGTSKINVNTENQIEFTKAVREVLNKDQEVYDPRKFIGPGRDAIKATVIGKIREFGSNGKA--
10SPARKS1gvfa0.9890.9555.644threading_10-SIISTKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGSAF-----------LTDPQEAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAWFAENPQGNDPRYYMRVGMDAMKEVVRNKINVCGSANRIS-

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.979 to 1gvfB
TM-score=0.998 to native
SCOP code=c.1.10.2
TM-score=0.939 to 1gvfB
TM-score=0.957 to native
SCOP code=c.1.10.2
TM-score=0.897 to 1gvfB
TM-score=0.914 to native
SCOP code=c.1.10.2
TM-score=0.893 to 1gvfB
TM-score=0.909 to native
SCOP code=c.1.10.2
TM-score=0.938 to 1gvfB
TM-score=0.955 to native
SCOP code=c.1.10.2

  Experimental Structure

Download 1gvfB
SCOP code=c.1.10.2