Template-based Modeling Results for KCH_ECOLI

Submitted Primary Sequence

>Length 417
MSHWATFKQTATNLWVTLRHDILALAVFLNGLLIFKTIYGMSVNLLDIFHIKAFSELDLSLLANAPLFMLGVFLVLNSIGLLFRAKLAWAISIILLLIALIYTLHFYPWLKFSIGFCIFTLVFLLILRKDFSHSSAAAGTIFAFISFTTLLFYSTYGALYLSEGFNPRIESLMTAFYFSIETMSTVGYGDIVPVSESARLFTISVIISGITVFATSMTSIFGPLIRGGFNKLVKGNNHTMHRKDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLAVSDSKNLNKIKMVHPDIILSPQLFGSEILARVLNGEEINNDMLVSMLLNSGHGIFSDNDELETKADSKESAQK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSHWATFKQTATNLWVTLRHDILALAVFLNGLLIFKTIYGMSVNLLDIFHIKAFSELDLSLLANAPLFMLGVFLVLNSIGLLFRAKLAWAISIILLLIALIYTLHFYPWLKFSIGFCIFTLVFLLILRKDFSHSSAAAGTIFAFISFTTLLFYSTYGALYLSEGFNPRIESLMTAFYFSIETMSTVGYGDIVPVSESARLFTISVIISGITVFATSMTSIFGPLIRGGFNKLVKGNNHTMHRKDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLAVSDSKNLNKIKMVHPDIILSPQLFGSEILARVLNGEEINNDMLVSMLLNSGHGIFSDNDELETKADSKESAQK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSHWATFKQTATNLWVTLRHDILALAVFLNGLLIFKTIYGMSVNLLDIFHIKAFSELDLSLLANAPLFMLGVFLVLNSIGLLFRAKLAWAISIILLLIALIYTLHFYPWLKFSIGFCIFTLVFLLILRKDFSHSSAAAGTIFAFISFTTLLFYSTYGALYLSEGFNPRIESLMTAFYFSIETMSTVGYGDIVPVSESARLFTISVIISGITVFATSMTSIFGPLIRGGFNKLVKGNNHTMHRKDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLAVSDSKNLNKIKMVHPDIILSPQLFGSEILARVLNGEEINNDMLVSMLLNSGHGIFSDNDELETKADSKESAQK
431111122100100000110000000001001002000000010010000200120101000100000000000010000001010000000000000001111011001000000000000001012001100000000000000000000000000012211223221001000000000000111211211110200000000000000010011010110200012102022222123310000010210110021024323200001212331131022122221100101021110023020330200000022111000000002311230200000122310220330412100012110010002101033012200010001223111232322213232332234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSHWATFKQTATNLWVTLRHDILALAVFLNGLLIFKTIYGMSVNLLDIFHIKAFSELDLSLLANAPLFMLGVFLVLNSIGLLFRAKLAWAISIILLLIALIYTLHFYPWLKFSIGFCIFTLVFLLILRKDFSHSSAAAGTIFAFISFTTLLFYSTYGALYLSEGFNPRIESLMTAFYFSIETMSTVGYGDIVPVSESARLFTISVIISGITVFATSMTSIFGPLIRGGFNKLVKGNNHTMHRKDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLAVSDSKNLNKIKMVHPDIILSPQLFGSEILARVLNGEEINNDMLVSMLLNSGHGIFSDNDELETKADSKESAQK
1	MUSTER	1lnqA	0.213	0.585	1.334	threading_1	------------------------------------------------------------------------------------------------------------------------------------------PATRILLLVLAVIIYGTAGFHFIEG------ESWTVSLYWTFVTIATVGYGDYSPSTPLGMYFTVTLIVLGIGTFAV-------------------AVERLLEFLRHVVICGWSESTLECLRELR--GSEVFVLAEDENV----RKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDESVRIIAEAERYENIEQLRMAGADQVISPFVISGRLMSRSIDDGYEAMFVQDVLAEESTRRMV----EVPIPEGSKLEGVS
2	PROSPECT2	1jdha	0.091	0.978	1.919	threading_2	VHQLSKKEASRHAIMRSPQMVSAIVRTMQNTTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQPQALVNIMRTYTYEKLLWTTSRVLKVLNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLVVTCAAGILSNLNKMMVCQVGGIEALVRTVLRAGDREDITEPAILTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAHQDTQFVEGVRMEEIVEGCTGALHILARD---------VHNRIVIRGLNTIPLFVQLLENIQRVAAGVLCELAQDKEAAEAIEAEGELLHSRNEGVATYAAAVLFRMS
3	PROSPECT2	3a6pA1	0.059	0.894	1.811	threading_3	ARYRLEALKFCEEFKEKCPICVPCGLRLAEKTQVAIVRH-FGLQILEHVVKFRWNGMSRLEKVYLKNSVMELIANGTNHIKDALSRIVVEMIKREMLIELDTLSKQGETQTELVMFILLRLAEDVVPQRRRDIQQTLTQNMERIFSFLLNTLQENVNKYQQVKTDTSQESKAQANCRVGVAALNTL--AGYIDWVSMSHITAENCKLLEILCLLLNEQELQLGAAECLLI---------------AVSRKGKLEDRKPLMVLF------------GDVAMHYILSAAQTADG---GGLVEKHYVFLKRLCQ-----------VLCALGNQLCALLGADSDVETPSNFGKYLESFLAFTTHPSQFLRSSTQMTWGALFRHEILSRRASMTNLVKMGFPSKTDSPSCEYSRFDFDSDED
4	SPARKS	1id1a	1.000	0.367	2.529	threading_4	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HRKDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLAVSDSKNLNKIKMVHPDIILSPQLFGSEILARVLNGEEINNDMLVSMLLN------------------------
5	PROSPECT2	1lnqa	0.194	0.595	2.104	threading_5	PA------------------------------------------------------------------------------------------------------------------------------------------------TRILLLVLAVIIYGTAGFHFIEGESWTVSLYWTFVTIATVGYGDYSPSTPLGMYFTVTLIVLGIGTFAVAVERL-------------------LEFLRHVVICGWSESTLECLRELRGSE--VFVLAEDEN----VRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDESVRIIAEAERYENIEQLRMAGADQVISPFVISGRLMSRSIDDGYEAMFVQDVLAEESTGSKLEGVSVLDADIHDVTGVSA
6	PPA-I	1lnqA	0.206	0.595	1.678	threading_6	------------------------------------------------------------------------------------------------------------------------------------------PATRILLLVLAVIIYGTAGF------HFIEGESWTVSLYWTFVTIATVGYGDYSPSTPLGMYFTVTLIVLGIGTFAVAV-------------------ERLLEFLRHVVICGWSESTLECLRELR--GSEVFVLAEDENV----RKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDESVRIIAEAERYENIEQLRMAGADQVISPFVISGRLMSRSIDDGYEAMFVQDVLAEESTRRMIPEGSKLEGVSVLDADIHD
7	HHPRED-l	1lnq_A	0.233	0.588	4.082	threading_7	----------------------------------------------------------------------------------------------------------------------------------------PATRILL--LVLAVIIYGTAGFHFIE-G-----ESWTVSLYWTFVTIATVGYGDYSPSTPLGMYFTVTLIVLGIGTFAVAVERLLEFL-------------------RHVVICGWSESTLECLRELRGSEV--FVLAEDENVRKK----VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDESVRIIAEAERYENIEQLRMAGADQVISPFVISGRLMSRSIDDGYEA--MFVQDVLAEESTRPPEGSKLEGVLDADDVTG-
8	HHPRED-g	1lnq_A	0.207	0.590	4.392	threading_8	-----------------------------------------------------------------------------------------------------------------------------------------PATRILL-LVLAVIIYGTAGFHFI------EGESWTVSLYWTFVTIATVGYGDYSPSTPLGMYFTVTLIVLGIGTFAVAVERLLEFL-------------------RHVVICGWSESTLECLRELRG--SEVFVLAEDENVRK----KVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDESVRIIAEAERYENIEQLRMAGADQVISPFVISGRLMSRSIDDGYEAM--FVQDVLAEESTRRMVEVDAIHDVTGVIRGDE
9	SP3	1id1a	1.000	0.367	1.930	threading_9	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HRKDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLAVSDSKNLNKIKMVHPDIILSPQLFGSEILARVLNGEEINNDMLVSMLLN------------------------
10	SAM-T99	1lnqA	0.206	0.595	4.798	threading_10	------------------------------------------------------------------------------------------------------------------------------------------PATRILLLVLAVIIYGTAGFHFIEG------ESWTVSLYWTFVTIATVGYGDYSPSTPLGMYFTVTLIVLGIGTFAVAVERLLEFL-------------------RHVVICGWSESTLECLREL--RGSEVFVLAEDE----NVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDESVRIIAEAERYENIEQLRMAGADQVISPFVISGRLMSRSIDDGYEAMADIHDVTGVIIIGVGRGDELIIDPPRDYSFRAG

Predicted Tertiary Structure


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TM-score=0.577 to 1lssA SCOP code=c.2.1.9	TM-score=0.694 to 1wa5B SCOP code=a.118.1.1	TM-score=0.566 to 1lssA SCOP code=c.2.1.9	TM-score=0.746 to 1b3uA SCOP code=a.118.1.2	TM-score=0.623 to 1u6gC SCOP code=a.118.1.2