Template-based Modeling Results for LDCA_ECOLI

Submitted Primary Sequence

>Length 304
MSLFHLIAPSGYCIKQHAALRGIQRLTDAGHQVNNVEVIARRCERFAGTETERLEDLNSLARLTTPNTIVLAVRGGYGASRLLADIDWQALVARQQHDPLLICGHSDFTAIQCGLLAHGNVITFSGPMLVANFGADELNAFTEHHFWLALRNETFTIEWQGEGPTCRAEGTLWGGNLAMLISLIGTPWMPKIENGILVLEDINEHPFRVERMLLQLYHAGILPRQKAIILGSFSGSTPNDYDAGYNLESVYAFLRSRLSIPLITGLDFGHEQRTVTLPLGAHAILNNTREGTQLTISGHPVLKM
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSLFHLIAPSGYCIKQHAALRGIQRLTDAGHQVNNVEVIARRCERFAGTETERLEDLNSLARLTTPNTIVLAVRGGYGASRLLADIDWQALVARQQHDPLLICGHSDFTAIQCGLLAHGNVITFSGPMLVANFGADELNAFTEHHFWLALRNETFTIEWQGEGPTCRAEGTLWGGNLAMLISLIGTPWMPKIENGILVLEDINEHPFRVERMLLQLYHAGILPRQKAIILGSFSGSTPNDYDAGYNLESVYAFLRSRLSIPLITGLDFGHEQRTVTLPLGAHAILNNTREGTQLTISGHPVLKM
CCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCCEEECCEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEECCEEEEEECCCEEEEEECCCCEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSLFHLIAPSGYCIKQHAALRGIQRLTDAGHQVNNVEVIARRCERFAGTETERLEDLNSLARLTTPNTIVLAVRGGYGASRLLADIDWQALVARQQHDPLLICGHSDFTAIQCGLLAHGNVITFSGPMLVANFGADELNAFTEHHFWLALRNETFTIEWQGEGPTCRAEGTLWGGNLAMLISLIGTPWMPKIENGILVLEDINEHPFRVERMLLQLYHAGILPRQKAIILGSFSGSTPNDYDAGYNLESVYAFLRSRLSIPLITGLDFGHEQRTVTLPLGAHAILNNTREGTQLTISGHPVLKM
4211000000131233300220021025110101114101331321112122002101100312212000000100100010021011300112334211000000000000000012011100000001121123322210111012113332221323232321202010100001000100002112413310000111332122011001102201102302000001012123332322220210011022412000000010012231000000020101024310201222211133
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSLFHLIAPSGYCIKQHAALRGIQRLTDAGHQVNNVEVIARRCERFAGTETERLEDLNSLARLTTPNTIVLAVRGGYGASRLLADIDWQALVARQQHDPLLICGHSDFTAIQCGLLAHGNVITFSGPMLVANFGADELNAFTEHHFWLALRNETFTIEWQGEGPTCRAEGTLWGGNLAMLISLIGTPWMPKIENGILVLEDINEHPFRVERMLLQLYHAGILPRQKAIILGSFSGSTPNDYDAGYNLESVYAFLRSRLSIPLITGLDFGHEQRTVTLPLGAHAILNNTREGTQLTISGHPVLKM
1	MUSTER	1zl0A	0.277	0.938	2.648	threading_1	DGRVALIAPASAI-ATDVLEATLRQLEVHGVDYHLGRHVEARYRYLAGTVEQRLEDLHNAFDMPDI-TAVWCLRGGYGCGQLLPGLDWGRLQAA---SPRPLIGFSDISVLLSAFHRH-GLPAIHGPVATGLGLSPLSAPREQQERLASLASVSRLLAGIDHGHKQRVEGALIGGNLTALACMAGTLGGLHPAGSILVLEDVGEPYYRLERSLWQLLESIDARQLGAICLGSFTDCPRKEVA--HSLERIFGEYAAAIEVPLYHHLPSGHGAQNRAWPYGKTAVLEGNRLRWG-----------
2	SPARKS	3u1ba	0.253	0.964	5.548	threading_2	GDTIGIYSPSSPVTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNV-SCIMSTIGGMNSNSLLPYIDYDAFQN----NPKIMIGYSDATALLLGIYAKTGIPTFYGPALVPSFGEFEFVDDTYKYFLETLLHDQALPYNIKQPTNGQATGRVIGGNLNTIQGIWGSPYMPCIEGDILFIEDSRKDAATIERSFSFLKINGVFDKVSGIILGKHEQFD--DCGTNRKPYEILLEVLQNQRIPLLADFDCCHTHPMITMPIGVQVKMDATNKTIHILEKWKI----
3	PROSPECT2	1zl0A	0.270	0.938	4.402	threading_3	SGRVALIAPASAI-ATDVLEATLRQLEVHGVDYHLGRHVEARYRYLAGTVEQRLEDLHNAFDMPDI-TAVWCLRGGYGCGQLLPGLDWGRLQ---AASPRPLIGFSDISVLLSAFH-RHGLPAIHGPVATGLGLSPLSAPREQQERLASLGIDHELPVQHLGGHKQRVEGALIGGNLTALACMAGTLGLHAPAGSILVLEDVGEPYYRLERSLWQLLESIDARQLGAICLGSFTDCPRKE--VAHSLERIFGEYAAAIEVPLYHHLPSGHGAQNRAWPYGKTAVLEGNRLRW-----------G
4	PPA-I	1zl0A	0.281	0.938	3.925	threading_4	DGRVALIAPASAI-ATDVLEATLRQLEVHGVDYHLGRHVEARYRYLAGTVEQRLEDLHNAFDMPDI-TAVWCLRGGYGCGQLLPGLDWGRLQAA---SPRPLIGFSDISVLLSAFHRHG-LPAIHGPVATGLGLSPLSAPREQQERLASLASVSRLLAGIDHGHKQRVEGALIGGNLTALACMAGTLGGLHPAGSILVLEDVGEPYYRLERSLWQLLESIDARQLGAICLGSFTDCPRKE--VAHSLERIFGEYAAAIEVPLYHHLPSGHGAQNRAWPYGKTAVLEGNRLRWG-----------
5	HHPRED-l	1zl0_A	0.263	0.938	7.865	threading_5	DGRVALIAPASAI-ATDVLEATLRQLEVHGVDYHLGRHVEARYRYLAGTVEQRLEDLHNAFDMPDITAV-WCLRGGYGCGQLLPGLDWGRLQ---AASPRPLIGFSDISVLLSAFH-RHGLPAIHGPVATGLGLSPLSAPREQQEVSRLLAGIDHELVQHLGGHKQRVEGALIGGNLTALACMAGTLGGLHAAGSILVLEDVGEPYYRLERSLWQLLESIDARQLGAICLGSFTDCPRK--EVAHSLERIFGEYAAAIEVPLYHHLPSGHGAQNRAWPYGKTAVLEGNRLRWG-----------
6	HHPRED-g	3sr3_A	0.259	0.954	6.738	threading_6	GDTIGIYSPSSPVTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSC-IMSTIGGMNSNSLLPYIDYDAF----QNNPKIMIGYSDATALLLGIYAKTGIPTFYGPALVPSFGEFPFVDDTYKYFLETLHDQALPYKAEISVTNGQATGRVIGGNLNTIQGIWGSPYMPCIQEGILFIEDSSKDAATIERSFSFLKINGVFDKVSGIILGKFDDCGT-----NRKPYEILLEVLQNQRIPLLADFDCCHTHPMITMPIGVQVKMDATNKTIHILEKW----KI
7	SP3	3t5ma	0.253	0.964	5.514	threading_7	MDTIGIYSPSSPVTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNV-SCIMSTIGGMNSNSLLPYIDYDAFQN----NPKIMIGYADATALLLGIYAKTGIPTFYGPALVPSFGEFEFVDDTYKYFLETLLHDQALPYNIKQPTNGQATGRVIGGNLNTIQGIWGSPYMPCIEGDILFIEDSSKDAATIERSFSFLKINGVFDKVSGIILGKHEQFD--DCGTNRKPYEILLEVLQNQRIPLLADFDCCHTHPMITMPIGVQVKMDATNKTIHILE---KWKI-
8	SAM-T99	3gjzA	0.228	0.938	6.641	threading_8	GDTIGIYSPSSPVTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPN-VSCISTI--GGNSNSLLPYIDYDAF----QNNPK-IIGYSDATALLLGIYAKTGIPTFYGPALVPSFGEPLFWSDEFINWEEKTKEKELRPNNWISVTNGQATGRVIGGNLNTIQGIWGSPYPCIQEGDILFIEDSSKDAATIERSFSFLKINGVFDKVSGIILGKHEQF--DDCGTNRKPYEILLEVLQNQRIPLLADFDCCHTHPITPIGVQVK---DATNKTIHILEKW------
9	MUSTER	3g23A	0.214	0.862	2.424	threading_9	TRRIAICAPSTPFTEDSARVIALAAAEFPDLSLSFHEQCFASEGHFAGSDALRLSAFLECANDDAFE-AVWFVRGGYGANRIAEDALARLGRAA---SAKQYLGYSDAGTLLAALYAHRIGRSVHAPPVDIRRPE---GESAVRRTLGWLAGAREGLEPT-------LGAPAVAFNLTL--ALCGTRLLPDLSGHVVI-EEVAEHHYAVDRLLFHVTSCLADAGIAGLRLGRVSDVPENDRPFGCSV-EEARHWCHRAGIAFLGTADIGHDVDNRIVPFG------------------------
10	SPARKS	3sr3a	0.249	0.964	5.533	threading_10	GDTIGIYSPSSPVTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNV-SCIMSTIGGMNSNSLLPYIDYDAFQN----NPKIMIGYSDATALLLGIYAKTGIPTFYGPALVPSFGEFEPFDDTYKYFLETLLHDQALPYNIKQPTNGQATGRVIGGNLNTIQGIWGSPYMPCIQGDILFIEDSSKDAATIERSFSFLKINGVFDKVSGIILGKHEQFD--DCGTNRKPYEILLEVLQNQRIPLLADFDCCHTHPMITMPIGVQVKMDATNKTIHILEKW--KI--

Predicted Tertiary Structure


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TM-score=0.914 to 1zl0A SCOP code=c.8.10.1	TM-score=0.920 to 1zl0A SCOP code=c.8.10.1	TM-score=0.829 to 1zl0A SCOP code=c.8.10.1	TM-score=0.915 to 1zl0A SCOP code=c.8.10.1	TM-score=0.911 to 1zl0A SCOP code=c.8.10.1