Template-based Modeling Results for LEP_ECOLI

Submitted Primary Sequence

>Length 324
MANMFALILVIATLVTGILWCVDKFFFAPKRRERQAAAQAAAGDSLDKATLKKVAPKPGWLETGASVFPVLAIVLIVRSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDPVSKELTIQPGCSSGQACENALPVTYSNVEPSDFVQTFSRRNGGEATSGFFEVPKNETKENGIRLSERKETLGDVTHRILTVPIAQDQVGMYYQQPGQQLATWIVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGRATAIWMSFDKQEGEWPTGLRLSRIGGIH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MANMFALILVIATLVTGILWCVDKFFFAPKRRERQAAAQAAAGDSLDKATLKKVAPKPGWLETGASVFPVLAIVLIVRSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDPVSKELTIQPGCSSGQACENALPVTYSNVEPSDFVQTFSRRNGGEATSGFFEVPKNETKENGIRLSERKETLGDVTHRILTVPIAQDQVGMYYQQPGQQLATWIVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGRATAIWMSFDKQEGEWPTGLRLSRIGGIH
CCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCHHHEEEEEEEEEEECCCCCCCCCCCCCHHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MANMFALILVIATLVTGILWCVDKFFFAPKRRERQAAAQAAAGDSLDKATLKKVAPKPGWLETGASVFPVLAIVLIVRSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDPVSKELTIQPGCSSGQACENALPVTYSNVEPSDFVQTFSRRNGGEATSGFFEVPKNETKENGIRLSERKETLGDVTHRILTVPIAQDQVGMYYQQPGQQLATWIVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGRATAIWMSFDKQEGEWPTGLRLSRIGGIH
551110000000000000000011011022123221223332232233221342233210120000000000000001000010010111121220221100000100110322213321132231330100002123334221132121222210102222210011211221211322221222313222113112322113122110112333223100100111221110112112121232221122332133212000221100000222311210211110222100010000000023331211221111201124
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MANMFALILVIATLVTGILWCVDKFFFAPKRRERQAAAQAAAGDSLDKATLKKVAPKPGWLETGASVFPVLAIVLIVRSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDPVSKELTIQPGCSSGQACENALPVTYSNVEPSDFVQTFSRRNGGEATSGFFEVPKNETKENGIRLSERKETLGDVTHRILTVPIAQDQVGMYYQQPGQQLATWIVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGRATAIWMSFDKQEGEWPTGLRLSRIGGIH
1	PROSPECT2	1atu_	0.076	0.898	1.428	threading_1	TFNKITPNLAEFAFSVSIAAAFAMLSLGAKGDTHDEILEGLNFNLTEIPEAQ----------------IHEGFQELLRT-------LNQPDSQLQLTTGNGLFLSE-----GLKLVDKFLEDVKKLYHSEAFTVNFGDQGKIVDLVKELDRDTVFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLGMFNIQHCKKLSSWVLLMKYLGNATAI-----FFLPDEGKLQHLENELTHDIITKFLENEDRRSASLLKSVLGQLGITKVFSNGADLSGVTEEAKAVHKAVLTIDEKGTEAAGAMFLEAIPMSIPPE
2	MUSTER	1b12A	0.996	0.738	2.661	threading_2	-----------------------------------------------------------------------------RSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDPVSKELTIQPGCSSGQACENALPVTYSNVEPSDFVQTFSRRNGGEATSGFFEVPKNETKENGIRLSERKETLGDVTHRILTVPIAQDQVGMYYQQPGQQLATWIVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGRATAIWMSFDG--------LRLSRIGGIH
3	PROSPECT2	1fc6a	0.120	0.923	1.387	threading_3	VTSEQLLFLEAWRAV-------DRAYVDKSFNG----------QSWFKLRETYLKKEPDRRAQTYDAIRKLAVLLEPSRLAALRRGTAGSVTGVGLESGKDVVVLTPAPGGPAEK--------AGARAGDVIVTTAVKGSLYDVSDLLQGEADSQVEVNTRTLQLTRQKVTINPVTFTTCSNVAAAALPPGAAKQQLGYVRLATFNSNLVLDIRNNGGGLFPAGVNVARLVDRGDLVLIADSQGIRDIYSADGNSIDSATPLVVDSKRGLIAGERTFGKGLIQTVVDLSDGSGVAVTVARYQTPAGDPEVLPTDLGSDAAPRLF
4	PROSPECT2	1xpqA	0.085	0.978	1.382	threading_4	DTLTNPLFLEEAQLSLLLEIVDNEMSKFAELEFHQHLGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLCRYLELWHGLDWKLLSAKDTYFGHQCEDGTVYNADYVIITVPQSVL-NLSVQPEKNLRGRIEFQPPLKPVIQDAFDKIHFGALGKVIF-----EFEECCWSNESSKIVTLANSTRNAENLDELDSMLERTSVTCWSQPLFFVNLSKSTGVASFMMLMQAPLTNHIESIREDKCLDSEDVIDGMRPIENIANANKPVLRNIIVSNWTRDPYSRGAYSACFVAMSNGQDSRIRFAGEHTIMDGAGCALLKLEHH-H
5	SPARKS	1b12a	1.000	0.738	2.446	threading_5	-----------------------------------------------------------------------------RSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDPVSKELTIQPGCSSGQACENALPVTYSNVEPSDFVQTFSRRNGGEATSGFFEVPKNETKENGIRLSERKETLGDVTHRILTVPIAQDQVGMYYQQPGQQLATWIVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGRATAIWMSFD--------GLRLSRIGGIH
6	PROSPECT2	1b12a	0.996	0.738	3.758	threading_6	-----------------------------------------------------------------------------RSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDPVSKELTIQPGCSSGQACENALPVTYSNVEPSDFVQTFSRRNGGEATSGFFEVPKNETKENGIRLSERKETLGDVTHRILTVPIAQDQVGMYYQQPGQQLATWIVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGRATAIWMSFDG--------LRLSRIGGIH
7	PPA-I	1b12A	1.000	0.738	2.825	threading_7	-----------------------------------------------------------------------------RSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDPVSKELTIQPGCSSGQACENALPVTYSNVEPSDFVQTFSRRNGGEATSGFFEVPKNETKENGIRLSERKETLGDVTHRILTVPIAQDQVGMYYQQPGQQLATWIVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGRATAIWMSFD--------GLRLSRIGGIH
8	HHPRED-l	1b12_A	1.000	0.735	11.289	threading_8	-----------------------------------------------------------------------------RSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDPVSKELTIQPGCSSGQACENALPVTYSNVEPSDFVQTFSRRNGGEATSGFFEVPKNETKENGIRLSERKETLGDVTHRILTVPIAQDQVGMYYQQPGQQLATWIVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGRATAIWMSFD--------GLRLSRIGGI-
9	HHPRED-g	1b12_A	1.000	0.738	10.621	threading_9	-----------------------------------------------------------------------------RSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDPVSKELTIQPGCSSGQACENALPVTYSNVEPSDFVQTFSRRNGGEATSGFFEVPKNETKENGIRLSERKETLGDVTHRILTVPIAQDQVGMYYQQPGQQLATWIVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGRATAIWMSFD--------GLRLSRIGGIH
10	SP3	1b12a	0.996	0.738	1.411	threading_10	-----------------------------------------------------------------------------RSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDPVSKELTIQPGCSSGQACENALPVTYSNVEPSDFVQTFSRRNGGEATSGFFEVPKNETKENGIRLSERKETLGDVTHRILTVPIAQDQVGMYYQQPGQQLATWIVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGRATAIWMSFDG--------LRLSRIGGIH

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.531 to 1k9oI TM-score=0.261 to native SCOP code=e.1.1.1	TM-score=0.863 to 1b12A TM-score=0.993 to native SCOP code=b.87.1.2	TM-score=0.771 to 1fcfA TM-score=0.196 to native SCOP code=b.36.1.3	TM-score=0.865 to 1b12A TM-score=0.996 to native SCOP code=b.87.1.2	TM-score=0.527 to 1b5qB TM-score=0.274 to native SCOP code=c.3.1.2

Experimental Structure

Download 1b12A

SCOP code=b.87.1.2