Template-based Modeling Results for LEXA_ECOLI


  Submitted Primary Sequence

>Length 202
MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRNGDWL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRNGDWL
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEECCHHCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCEEEEEEEEEECCEEEEEECCCCCCCEEECCCCCEEEEEEEEEEEEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRNGDWL
5541323012002002200332310011110034031302210120020023221232221212122123232311111030111322222322311010122113331100020221112321012000000222331431100001034200011022223200000212414101012442101010000000131324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRNGDWL
1MUSTER1jhhA0.9950.9753.934threading_1-KALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMAMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRN----
2SPARKS3k2za0.3560.9464.608threading_2--DLTERQRKVLLFIEEFIEKNGYPPSVREIARRFRITP-RGALLHLIALEKKGYIER---KPRALRISKSIRNKIPLIGEIRAGEKREAIEYLEDYIEIPESFLSSGYHFLLKVKGESMIEEHICDGDLVLVRRQDWAQNGDIVAAMVDGEVTLAKFYQRGDTVELRPANREMSSMFFRA--EKVKILGKVVGVFRKL---
3PROSPECT23k2zA0.3610.9464.469threading_3--DLTERQRKVLLFIEEFIEKNGYPPSVREIARRFRITPRGALL-HLIALEKKGYIER---KPRALRISKSIRNKIPLIGEIRAGEKREAIEYLEDYIEIPESFLSSGDHFLLKVKGESMIEEHICDGDLVLVRRQDWAQNGDIVAAMVDGEVTLAKFYQRGDTVELRPANREMSSMFFR--AEKVKILGKVVGVFRK---L
4PPA-I1jhhA0.9950.9754.363threading_4-KALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMAMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRN----
5HHPRED-l1jhf_A0.9950.9755.729threading_5-KALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAADEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRN----
6HHPRED-g1jhf_A0.9950.9755.967threading_6-KALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAADEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRN----
7SP33k2za0.3560.9464.990threading_7--DLTERQRKVLLFIEEFIEKNGYPPSVREIARRFRITP-RGALLHLIALEKKGYIER---KPRALRISKSIRNKIPLIGEIRAGEKREAIEYLEDYIEIPESFLSSGYHFLLKVKGESMIEEHICDGDLVLVRRQDWAQNGDIVAAMVDGEVTLAKFYQRGDTVELRPANREMSSMFFRA--EKVKILGKVVGVFRKL---
8SAM-T991jhhA0.9950.9756.194threading_8-KALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMAMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRN----
9MUSTER3k2zA0.3560.9463.921threading_9--DLTERQRKVLLFIEEFIEKNGYPPSVREIARRFRITP-RGALLHLIALEKKGYIERKP---RALRISKSIRNKIPLIGEIRAGEKREAIEYLEDYIEIPESFLSSGYHFLLKVKGESMIEEHICDGDLVLVRRQDWAQNGDIVAAMVDGEVTLAKFYQRGDTVELRPANREMSSMFFRA--EKVKILGKVVGVFRKL---
10SPARKS1jhfa0.9950.9754.362threading_10-KALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAADEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRN----

  Predicted Tertiary Structure

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TM-score=0.984 to 1jhhA
TM-score=0.986 to native
SCOP code=a.4.5.2
TM-score=0.984 to 1jhhA
TM-score=0.986 to native
SCOP code=a.4.5.2
TM-score=0.689 to 1jhhA
TM-score=0.582 to native
SCOP code=a.4.5.2
TM-score=0.693 to 1jhhA
TM-score=0.589 to native
SCOP code=a.4.5.2
TM-score=0.984 to 1jhhA
TM-score=0.986 to native
SCOP code=a.4.5.2

  Experimental Structure

Download 1jhfA
SCOP code=a.4.5.2