Template-based Modeling Results for LOMR_ECOLI


  Submitted Primary Sequence

>Length 164
MRNRWFSVMVGPSVRVNEWFSAYAMAGMAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDGRHSNTSLAWGAGVQFNPTESVAIDIAYEGPGSGDWRTDGFIVGVGYKFMLTGSDDGRHSNTSLAWGAGVQFNPTESVAIDIAYEGPGSGDWRTDGFIVGVGYKF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRNRWFSVMVGPSVRVNEWFSAYAMAGMAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDGRHSNTSLAWGAGVQFNPTESVAIDIAYEGPGSGDWRTDGFIVGVGYKFMLTGSDDGRHSNTSLAWGAGVQFNPTESVAIDIAYEGPGSGDWRTDGFIVGVGYKF
CCCEEEEEEEEEEEEECCEEEEEEEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEEEECCCCEEECCEEEEEEEEEEECCCCCCCCCCCCEEEECEEEECCCCCEEEEEEECCCCCCCEEECCEEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MRNRWFSVMVGPSVRVNEWFSAYAMAGMAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDGRHSNTSLAWGAGVQFNPTESVAIDIAYEGPGSGDWRTDGFIVGVGYKFMLTGSDDGRHSNTSLAWGAGVQFNPTESVAIDIAYEGPGSGDWRTDGFIVGVGYKF
55321100100000101110000000000001021223210202233132332221233142231100000001001131000000020012121102000000000001212332432321000000010111310000001211111211020000000133
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMRNRWFSVMVGPSVRVNEWFSAYAMAGMAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDGRHSNTSLAWGAGVQFNPTESVAIDIAYEGPGSGDWRTDGFIVGVGYKFMLTGSDDGRHSNTSLAWGAGVQFNPTESVAIDIAYEGPGSGDWRTDGFIVGVGYKF
1MUSTER3qraA0.2150.7931.322threading_1LDKNPRGFNLKYRYEFNNDWGVIGSFAQTRRGFEESVLIDGDFK---------------------YYSVTAGPVFRINEYVSLYGLLGAG-HGKAKFSS------------FGQSESRSKTSLAYGAGLQFNPHPNFVIDASYEYSKLDDVKVGTWMLGAGYRF
2SPARKS1qj8a0.3410.5553.689threading_2NKNQYYGITAGPAYRINDWASIYGVVGVGYGKFQTTE-----------------YPTYKNDTSDYGFSYGAGLQFNPMENVALDFSYEQSRIRSVDVGTWIAGVGYRF--------------------------------------------------------
3PROSPECT23qraA0.2560.7621.332threading_3MEGES-----------------SISIGYAQSRVKE----------------------DGYKLDKNPRGFNLKYRYEFNNDWGVIGSFAQSVLIDGDFKYYSVTAGPVFFSSFGQSESRSKTSLAYGAGLQFNPHPNFVIDASYEYSKLDDVKVGTWMLGAGYRF
4PPA-I1q9fA0.3300.5553.295threading_4NKNQYYGITAGPAYRINDWASIYGVVGVGYGKF-----------------QTTEYPTYKNDTSDYGFSYGAGLQFNPMENVALDFSYEQSRIRSVDVGTWIAGVGYRF--------------------------------------------------------
5HHPRED-l1orm_A0.3410.5553.950threading_5NKNQYYGITAGPAYRINDWASIYGVVGVGYGKFQTTE-----------------YPTYKNDTSDYGFSYGAGLQFNPMENVALDFSYEQSRIRSVDVGTWIAGVGYRF--------------------------------------------------------
6HHPRED-g1orm_A0.3410.5553.496threading_6NKNQYYGITAGPAYRINDWASIYGVVGVGYGKFQTTE-------------------------------------------------------------------------YPTYKNDTSDYGFSYGAGLQFNPMENVALDFSYEQSRIRSVDVGTWIAGVGYRF
7SP31qj8a0.3410.5553.151threading_7NKNQYYGITAGPAYRINDWASIYGVVGVGYGKFQTTE-----------------YPTYKNDTSDYGFSYGAGLQFNPMENVALDFSYEQSRIRSVDVGTWIAGVGYRF--------------------------------------------------------
8SAM-T993qraA0.3600.5437.039threading_8-DFKYYSVTAGPVFRINEYVSLYGLLGAGHGKAKFSSFG------------------QSESRSKTSLAYGAGLQFNPHPNFVIDASYEYSKLDDVKVGTWMLGAGYRF--------------------------------------------------------
9MUSTER1q9fA0.1970.8051.279threading_9QMNKMGGFNLKYRYEEDNS-PLGVIGSFTYTE-----------------KSRTASSGDYNKNQYYGITAGPAYRINDWASIYGVVGVGYGKFQT--------------TEYPTYKNDTSDYGFSYGAGLQFNPMENVALDFSYEQSRIRSVDVGTWIAGVGYRF
10SPARKS3aeha0.1401.0001.118threading_10FTDHYTLLQMGADRKHELDLFTGVMATYTDTDASADLYSYASGLFRSGDLNFAGAGKQNFRSHSLYAGAEVGYRYHLTDTTFVEPQAELVWGGQNSVNPLVGRTGVVSGKTFSGKDSRKDSRMLYGVGLNARFGDNTRLGLEVERSAFGKYNTDAINANIRYSF

  Predicted Tertiary Structure

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TM-score=0.661 to 1q9fA
SCOP code=f.4.1.1
TM-score=0.540 to 1q9fA
SCOP code=f.4.1.1
TM-score=0.470 to 1q9fA
SCOP code=f.4.1.1
TM-score=0.552 to 1q9fA
SCOP code=f.4.1.1
TM-score=0.501 to 1q9fA
SCOP code=f.4.1.1