Template-based Modeling Results for AMY1_ECOLI


  Submitted Primary Sequence

>Length 676
MKLAACFLTLLPGFAVAASWTSPGFPAFSEQGTGTFVSHAQLPKGTRPLTLNFDQQCWQPADAIKLNQMLSLQPCSNTPPQWRLFRDGEYTLQIDTRSGTPTLMISIQNAAEPVASLVRECPKWDGLPLTVDVSATFPEGAAVRDYYSQQIAIVKNGQIMLQPAATSNGLLLLERAETDTSAPFDWHNATVYFVLTDRFENGDPSNDQSYGRHKDGMAEIGTFHGGDLRGLTNKLDYLQQLGVNALWISAPFEQIHGWVGGGTKGDFPHYAYHGYYTQDWTNLDANMGNEADLRTLVDSAHQRGIRILFDVVMNHTGYATLADMQEYQFGALYLSGDEVKKSLGERWSDWKPAAGQTWHSFNDYINFSDKTGWDKWWGKNWIRTDIGDYDNPGFDDLTMSLAFLPDIKTESTTASGLPVFYKNKMDTHAKAIDGYTPRDYLTHWLSQWVRDYGIDGFRVDTAKHVELPAWQQLKTEASAALREWKKANPDKALDDKPFWMTGEAWGHGVMQSDYYRHGFDAMINFDYQEQAAKAVDCLAQMDTTWQQMAEKLQGFNVLSYLSSHDTRLFREGGDKAAELLLLAPGAVQIFYGDESSRPFGPTGSDPLQGTRSDMNWQDVSGKSAASVAHWQKISQFRARHPAIGAGKQTTLLLKQGYGFVREHGDDKVLVVWAGQQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKLAACFLTLLPGFAVAASWTSPGFPAFSEQGTGTFVSHAQLPKGTRPLTLNFDQQCWQPADAIKLNQMLSLQPCSNTPPQWRLFRDGEYTLQIDTRSGTPTLMISIQNAAEPVASLVRECPKWDGLPLTVDVSATFPEGAAVRDYYSQQIAIVKNGQIMLQPAATSNGLLLLERAETDTSAPFDWHNATVYFVLTDRFENGDPSNDQSYGRHKDGMAEIGTFHGGDLRGLTNKLDYLQQLGVNALWISAPFEQIHGWVGGGTKGDFPHYAYHGYYTQDWTNLDANMGNEADLRTLVDSAHQRGIRILFDVVMNHTGYATLADMQEYQFGALYLSGDEVKKSLGERWSDWKPAAGQTWHSFNDYINFSDKTGWDKWWGKNWIRTDIGDYDNPGFDDLTMSLAFLPDIKTESTTASGLPVFYKNKMDTHAKAIDGYTPRDYLTHWLSQWVRDYGIDGFRVDTAKHVELPAWQQLKTEASAALREWKKANPDKALDDKPFWMTGEAWGHGVMQSDYYRHGFDAMINFDYQEQAAKAVDCLAQMDTTWQQMAEKLQGFNVLSYLSSHDTRLFREGGDKAAELLLLAPGAVQIFYGDESSRPFGPTGSDPLQGTRSDMNWQDVSGKSAASVAHWQKISQFRARHPAIGAGKQTTLLLKQGYGFVREHGDDKVLVVWAGQQ
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCEECCCCCCCCCCEECCCCCCCCCCCEEEECCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEECCCCCCEEEECCCCCEEEEECCCCCCEEEECCCCCCCCCCCCHHCCEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHCCEEEEEECCCCEEEEEECCCEEEEEEECCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKLAACFLTLLPGFAVAASWTSPGFPAFSEQGTGTFVSHAQLPKGTRPLTLNFDQQCWQPADAIKLNQMLSLQPCSNTPPQWRLFRDGEYTLQIDTRSGTPTLMISIQNAAEPVASLVRECPKWDGLPLTVDVSATFPEGAAVRDYYSQQIAIVKNGQIMLQPAATSNGLLLLERAETDTSAPFDWHNATVYFVLTDRFENGDPSNDQSYGRHKDGMAEIGTFHGGDLRGLTNKLDYLQQLGVNALWISAPFEQIHGWVGGGTKGDFPHYAYHGYYTQDWTNLDANMGNEADLRTLVDSAHQRGIRILFDVVMNHTGYATLADMQEYQFGALYLSGDEVKKSLGERWSDWKPAAGQTWHSFNDYINFSDKTGWDKWWGKNWIRTDIGDYDNPGFDDLTMSLAFLPDIKTESTTASGLPVFYKNKMDTHAKAIDGYTPRDYLTHWLSQWVRDYGIDGFRVDTAKHVELPAWQQLKTEASAALREWKKANPDKALDDKPFWMTGEAWGHGVMQSDYYRHGFDAMINFDYQEQAAKAVDCLAQMDTTWQQMAEKLQGFNVLSYLSSHDTRLFREGGDKAAELLLLAPGAVQIFYGDESSRPFGPTGSDPLQGTRSDMNWQDVSGKSAASVAHWQKISQFRARHPAIGAGKQTTLLLKQGYGFVREHGDDKVLVVWAGQQ
4321000001000000012121220111233221101020312412110101133200222322322110102112333120100231201020234322110101133223322211230232322201020010133121022111210110331310011122220000122232322122113200000000110231222113211223212121121110003000210100340002000000003213122121231212111111010100130022101120022002101422010000000100011121213213101112113313322234111122122321121121131223211331112221222113131211001111111112031311211111111322232013113221121000200120032110200201103202220022012101100220131002211333210000111020120012122212000002012101200200120010021003312011001101111121012001100100000210000010220122102212111310211021332223222001001200200231200021201100142000001222312000012356
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKLAACFLTLLPGFAVAASWTSPGFPAFSEQGTGTFVSHAQLPKGTRPLTLNFDQQCWQPADAIKLNQMLSLQPCSNTPPQWRLFRDGEYTLQIDTRSGTPTLMISIQNAAEPVASLVRECPKWDGLPLTVDVSATFPEGAAVRDYYSQQIAIVKNGQIMLQPAATSNGLLLLERAETDTSAPFDWHNATVYFVLTDRFENGDPSNDQSYGRHKDGMAEIGTFHGGDLRGLTNKLDYLQQLGVNALWISAPFEQIHGWVGGGTKGDFPHYAYHGYYTQDWTNLDANMGNEADLRTLVDSAHQRGIRILFDVVMNHTGYATLADMQEYQFGALYLSGDEVKKSLGERWSDWKPAAGQTWHSFNDYINFSDKTGWDKWWGKNWIRTDIGDYDNPGFDDLTMSLAFLPDIKTESTTASGLPVFYKNKMDTHAKAIDGYTPRDYLTHWLSQWVRDYGIDGFRVDTAKHVELPAWQQLKTEASAALREWKKANPDKALDDKPFWMTGEAWGHGVMQSDYYRHGFDAMINFDYQEQAAKAVDCLAQMDTTWQQMAEKLQGFNVLSYLSSHDTRLFREGGDKAAELLLLAPGAVQIFYGDESSRPFGPTGSDPLQGTRSDMNWQDVSGKSAASVAHWQKISQFRARHPAIGAGKQTTLLLKQGYGFVREHGDDKVLVVWAGQQ
1MUSTER4aeeA0.1790.8492.194threading_1VKFTRHWIYLIGEFT---SLYPGFVKL--RKIEEQGIVYLKLWPGEYGYGFQIDND-FFPEYKKCLSKLVIKEPDNPLDKIIH-IEESGFIHKFN---GEIIIRLIAPTEINEPLIDLGNEIREPLTKHVVG---IIPSRSILRYRF---IFNYNDKKLFYGDEENSSYIVVNSKYIPGVDKPRWYMGTVYYQIFIDSFDNGDPNNDPPN-RIKKTVPREYGYYGGDLAGIMKHIDHLEDLGVETIYLTPIFSST---------------SYHRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLDITMHHTNPCNELFVENSPYWEMFSFLSPPPKEIVELMLKYIDGEECRSRELYKLDYFRNN---KPFYEAFF------------------NIWLMAKFNHDN-----------------------PRTVDYFIDITKFWIDK-GIDGFRIDVAMGIHYSWMKQYYEYIKNT---------------PDFLVLGELAEN----PRIYMDYFDSAMNYYLRKAILELLIYLNEFISRINNVYAYIPALSLYNMLGSHDVPRIKSMLKLMYVLIFALPGSPVIYYGDEIGLEGG---RDP--DNRRPMIWDR-GNWDLELYEHIKKLIRIYKSCRSMRHGYFLVENLSNLLFIKRWINNEEIIFLLNVSS
2SPARKS4aeea0.1770.8523.934threading_2WPQYAKNIYLIGEF---TSLYPGFVKL--RKIEEQGIVYLKLWPGEYGYGFQIDNDVLDPDNEEKKCVHTSFFPEYKKCLSKLVIKEPDFIHKFN---GEIIIRLIAPTEINEPLIDL-------GNEIREPLTKHVVGDNIVYQYRYRFIFNYNDKKLFYGDEENSSYIVVNSKYIPGVDKPRWYMGTVYYQIFIDSFDNGDPNNDPPN-RIKKTVPREYGYYGGDLAGIMKHIDHLEDLGVETIYLTPIFSST---------------SYHRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLDITMHHTNPCNELFVENSPYWEMFSFLSPPPKEIVELMLKYIDGEECRSRELYKLDYFRNN---KPFYEAFF------------------NIWLMAKFNHDNP-----------------------RTVDYFIDITKFWI-DKGIDGFRIDVAMGIHYSWMKQYYEYIKNT--------------YPDFLVLGELAEN----PRIYMDYFDSAMNYYLRKAILELLIYLNEFISRINNVYAYIPHLSLYNMLGSHDKSMVNKLLKLMYVLIFALPGSPVIYYGDEIGLE-----GGRDPDNRRPMIWDR-GNWDLELYEHIKKLIRIYKSCRSMRHGYFLVENLGSLLFIKRWINNEEIIFLLNVSS
3PROSPECT24aeeA0.1640.8773.970threading_3MKGRKGRYIVKFTRHWPQYAKNYPGFVKLRKIEEQGIVYLKLWPGEYGYGFQIDND-FENVLDPDNEEKKCVHTSFFPEYKKCLSKESGFIHKFN---GEIIIRLIAPTEINEPLIDLGNEIREPLTKHVVGDNIVYQYIIPSRSILRYRFIFNYNDKKLFYGDENSSYIVVNSKYIPGVDKPRWYMGTVYYQIFIDSFDNGDPNNDPP-NRIKKTVPREYGYYGGDLAGIMKHIDHLEDLGVETIYLTPIFSS---------------TSYHRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLDITMHHTNPCNELFVKALREG---------ENSPYWEMFSFLSPPPKEIVELMLKYIDGEECRSRELYKLDYFRNNKPFYE------AFFNIWLMAKFNHDNPRT-----------------------VDYFIDITKFWI-DKGIDGFRIDVAMGIHYSWMKQYYEYIKNT--------------YPDFLVLGELAEN----PRIYMDYFDSAMNYYLRKAILELLIYLNEFISRINNVYAYIPALSLYNMLGSHDVPRIKSMVKLMYVLIFALPGSPVIYYGDEIGLEG-----GRDPDNRRPMIWDR-GNWDLELYEHIKKLIRIYKSCRSMRHGYFLVENLGSNLFIKRWINNEEIIFLLNVSS
4PPA-I1ea9C0.2370.7372.627threading_4------------------------------------------------------------------------------MFLEAVYHRPRKNFSYAYNGTTVHLRIRTKKDDTAVYALAGDKYMWDHTMEYVPMTKLATDELEVTPPYRRKRWMTEYDFLTEPPANPDRLFEYPFINPVDVFPPAWVKDAIFYQIFPERFANGDTRNDPEGTLPGSADPTPSCFFGGDLQGVIDHLDHLSKLGVNAVYFTPLFKAT---------------TNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVFNHSGRTFPPFV------------DVLKNGEKSKYKDWFHIRSLPLEV----------------------------VDGIPTYDTFAFEPLMPKLNTEH-----------------------PDVKEYLLKAAEYWIRETGIDGWRLDVANEVSHQFWREFRRVVKQAN--------------PDAYILGEVWHESS--IWLEGDQFDAVMNYPFTNAVLDFFIHAEKFSFMLGKQLAGYPSEVMFNLLDSHDLTQAKRKMKLAVLFQFTYFGTPCIYYGDEVGLDGG-----HDPGCRKCMEWDE-TKHDKDLFAFYQTVIRLRQAHAALRTGTFKFLTAERQIAYLREDDQDTILVVMNNDK
5HHPRED-l3edf_A0.1910.7512.349threading_5------------------------------------------------------------PTAIEMEPPFWWAGMQHKGLQLMVHGRDIGRMEAALDYPGVRLV-SP----TRVPNANYL-------FVDLEIGPEAQPGSF-------DIVFKGDGRSERY------RYRLLAREQGSAQRQGFGPGDAIYQIMPDRFANGDPSNDNVAGMREADRRHGGGRHGGDIRGTIDHLDYIAGLGFTQLWPTPLVENDA-----------AAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDVVLSHIGKHHWWMKDLPT----------------PDWINYGGK--------------FVPTQHHRVAVQDPY------------------------AAQADSENFTKGWFVEGMPDL---NQTNPLVANYLIQNNIWWIEYAGLSGLRIDTYGYSDGAFLTEYTRRLMAE--------------YPRLNMVGQEWSTRVPVVARYTSHLPSLMDFPLVDAMRNALSKTNGLNEVYETLYLYPEPQNLVLFGGNHDMARMFSRWRMNLVFLMTMPRIPQFYSGDEILMTSTVKRDDASYRRDFPGGWAGDTSQQRAAQDLVRKLANWRKNQPVIHNGRLMHFGEENTWVYFRYNKDKRIMVAMNNN-
6HHPRED-g1wzl_A0.2220.7342.348threading_6------------------------------------------------------------------------------MLLEAIFHEAKGSYAYPISETQLRVRLRAKKGDVVRCEVLYADRYSPEEELAH-ALAGKAGSDERFDYFEALLELLTQGEAVYFGETKAGVFQYAYIHRSEVFTTPEWKEAVIYQIFPERFANGDPSNDPPGTEQWAKRPRHDSFYGGDLKGVIDRLPYLEELGVTALYFTPIFAS---------------PSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDAVFNHAGDQFF------------AFRDVLQKGEQSRYKDWFFIEDFPVS-----------------------KTSRTNYETFA-----VQVPAMPKLRTENPEV-----------------------KEYLFDVARFWME-QGIDGWRLDVANEVDHAFWREFRRLVKSL--------------NPDALIVGEIWHDAS--GWLMGDQFDSVMNYLFRESVIRFFARFDAELTRARMLYPEQAAQGLWNLLDSHDTERFLTKFRLAVLFQMTYLGTPLIYYGDEIGMAGAT-----DPDCLRPMIWEEK-EQNRGLFEFYKELIRLRHRLASLTRGNVRSWHADNLYAFVRTVQDQHVGVVLNNRG
7SP34aeea0.1690.8594.051threading_7GKGRKGRYIVKFTRHWPQYAKNGEFTSLYPKIEEQGIVYLKLWPGEYGYGFQIDNDVLDPDNEEKVHTSFEYKKCEPDNPLDKIIHIEGFIHKFN---GEIIIRLIAPTEINEPLIDLGN-------EIREPLTKHVVGDNIVYQYRYRFIFNYNDKKLFYGDEENSSYIVVNSKYIPGVDKPRWYMGTVYYQIFIDSFDNGDPNNDPPN-RIKKTVPREYGYYGGDLAGIMKHIDHLEDLGVETIYLTPIFSST---------------SYHRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLDITMHHTNPCNELFVENSPYWEMFSFLSPPPKEIVELMLKYIDGEECRSRELYKLDYFRNN---KPFYEAFF------------------NIWLMAKFNHDN-----------------------PRTVDYFIDITKFWI-DKGIDGFRIDVAMGIHYSWMKQYYEYIKNT--------------YPDFLVLGELAE----NPRIYMDYFDSAMNYYLRKAILELLNEFISRINNVYAYIPHYKALSLYNMLGSHDKSMVNKLLKLMYVLIFALPGSPVIYYGDEIGLEG-----GRDPDNRRPMIWDR-GNWDLELYEHIKKLIRIYKSCRSMRHGYFLVENLSNLLFIKRWINNEEIIFLLNVSS
8SAM-T991gviA0.2020.7633.416threading_8--------------------------------------------------MRKEAIHHRSTDNFAYAYDSE-------TLHLRLQTKKNDVDHVELLFGDPYEWDGAWQFQTMPMRKTGSDGLFDYWLAEVKPPRRLRYGFVLRA-GGEKLVYTEKGFYHEAPSDDTYYFCFPFLHRVDLFQAPDWKDTVWYQIFPERFANGNPAISPKGARPWGEDPTPTSFFGGDLQGIIDHLDYLADLGITGIYLTPIFR---------------APSNHKYDTADYFEIDPHFGDKETLKTLVKRCHEKGIRVMLDAVFNHCGYEFAPF------------QDVLKNGAASRYKDWFHIREFPLQT----------EPRPNYD-------------------TFAFVPHMPKLNTAHPE-----------------------VKRYLLDVATYWIREFDIDGWRLDVANEIDHQFWREFRQAVKA--------------LKPDVYILGLIWHDAMP--WLRGDQFDAVMNYPLADAALRFFAKEDMSLMHVLHSYPKQVNEAAFNLLGSHDTPRLLTKVKLLFLFQLTFTGSPCIYYGDEIGMTGGN-----DPECRKCMVWD-PEKQNKELYEHVKQLIALRKQYRALRRGDVAFLTADNHLVYAKTDGNETVMIIINRS-
9MUSTER1ea9C0.2410.7312.144threading_9-----------------------------------------------------------------MFLAVYHRP------------RKNFSYAYN--GTTVHLRIRTKKDMTAVYALAGDKYMWDHTMEYVPMTKLATDEL--FDYWEEKRWMTEYDFLTEPPANPDRLFEYPFINPVDVFQPAWVKDAIFYQIFPERFANGDTRNDPEGTLPWGADPTPSCFFGGDLQGVIDHLDHLSKLGVNAVYFTPLFKAT---------------TNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVFNHSGRTFPPF------------VDVLKNGEKSKYKDWFHIRSLPL-------EVVDGIPTYDTF---------------------AFEPLMPKLNTEH-----------------------PDVKEYLLKAAEYWIRETGIDGWRLDVANEVSHQFWREFRRVVKQA---------------PDAYILGEVWHESSI--WLEGDQFDAVMNYPFTNAVLDFFIHAEKFSFMLGKQLAGYPSEVMFNLLDSHDTARLLTQMKLAVLFQFTYFGTPCIYYGDEVGLDGG-----HDPGCRKCMEWDE-TKHDKDLFAFYQTVIRLRQAHAALRTGTFKFLTAERQIAYLREDDQDTILVVMNNDK
10SPARKS1ea9c0.2300.7343.087threading_10------------------------------------------------------------------------------MFLEAVYHRPRKNFSYAYNGTTVHLRIRTKKDDTAVYALAGDKYMWDHTMEYVPMTKLATDEL--FDYWEEKRWMTEYDFLTEPPANPDRLFEYPFINPVDVFQPAWVKDAIFYQIFPERFANGDTRNDPEGTLPGSADPTPSCFFGGDLQGVIDHLDHLSKLGVNAVYFTPL---------------FKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVFNHSGRTFPPFV------------DVLKNGEKSKYKDWFHIRSLPLEVVDGI--------PTYDTFAFEPLMPKLNTEH-------------------------------------------PDVKEYLLKAAEYWIRETGIDGWRLDVANEVSHQFWREFRRVVKQA--------------NPDAYILGEVWHESSI--WLEGDQFDAVMNYPFTNAVLDFAEKFSFMLGKQLAGYPRQASEVMFNLLDSHDLTQAKRKMKLAVLFQFTYFGTPCIYYGDEVGLDGG-----HDPGCRKCMEWD-ETKHDKDLFAFYQTVIRLRQAHAALRTGTFKFLTASRQIAYLREDDQDTILVVMNNDK

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.704 to 1g1yA
SCOP code=b.1.18.2
TM-score=0.706 to 1gviA
SCOP code=b.1.18.2
TM-score=0.690 to 1gviA
SCOP code=b.1.18.2
TM-score=0.737 to 1g1yA
SCOP code=b.1.18.2
TM-score=0.773 to 1ea9C
SCOP code=b.1.18.2