Template-based Modeling Results for MQO_ECOLI

Submitted Primary Sequence

>Length 548
MKKVTAMLFSMAVGLNAVSMAAKAKASEEQETDVLLIGGGIMSATLGTYLRELEPEWSMTMVERLEGVAQESSNGWNNAGTGHSALMELNYTPQNADGSISIEKAVAINEAFQISRQFWAHQVERGVLRTPRSFINTVPHMSFVWGEDNVNFLRARYAALQQSSLFRGMRYSEDHAQIKEWAPLVMEGRDPQQKVAATRTEIGTDVNYGEITRQLIASLQKKSNFSLQLSSEVRALKRNDDNTWTVTVADLKNGTAQNIRAKFVFIGAGGAALKLLQESGIPEAKDYAGFPVGGQFLVSENPDVVNHHLAKVYGKASVGAPPMSVPHIDTRVLDGKRVVLFGPFATFSTKFLKNGSLWDLMSSTTTSNVMPMMHVGLDNFDLVKYLVSQVMLSEEDRFEALKEYYPQAKKEDWRLWQAGQRVQIIKRDAEKGGVLRLGTEVVSDQQGTIAALLGASPGASTAAPIMLNLLEKVFGDRVSSPQWQATLKAIVPSYGRKLNGDVAATERELQYTSEVLGLNYDKPQAADSTPKPQLKPQPVQKEVADIAL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKVTAMLFSMAVGLNAVSMAAKAKASEEQETDVLLIGGGIMSATLGTYLRELEPEWSMTMVERLEGVAQESSNGWNNAGTGHSALMELNYTPQNADGSISIEKAVAINEAFQISRQFWAHQVERGVLRTPRSFINTVPHMSFVWGEDNVNFLRARYAALQQSSLFRGMRYSEDHAQIKEWAPLVMEGRDPQQKVAATRTEIGTDVNYGEITRQLIASLQKKSNFSLQLSSEVRALKRNDDNTWTVTVADLKNGTAQNIRAKFVFIGAGGAALKLLQESGIPEAKDYAGFPVGGQFLVSENPDVVNHHLAKVYGKASVGAPPMSVPHIDTRVLDGKRVVLFGPFATFSTKFLKNGSLWDLMSSTTTSNVMPMMHVGLDNFDLVKYLVSQVMLSEEDRFEALKEYYPQAKKEDWRLWQAGQRVQIIKRDAEKGGVLRLGTEVVSDQQGTIAALLGASPGASTAAPIMLNLLEKVFGDRVSSPQWQATLKAIVPSYGRKLNGDVAATERELQYTSEVLGLNYDKPQAADSTPKPQLKPQPVQKEVADIAL
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCCCCCCCCCCEECCCHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCEEEEEEECCCCCEEEEEEECCCCCEEEEEECEEEECCCHHHHHHHHHCCCCCCCCEEEEEECCEEEECCCHHHHHHCCCEEECCCCCCCCCCCCCCCCCEEECCCEEEEECCCCCCCHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHEEEECCCEEEEEECCCCCCCCEEEECCEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKVTAMLFSMAVGLNAVSMAAKAKASEEQETDVLLIGGGIMSATLGTYLRELEPEWSMTMVERLEGVAQESSNGWNNAGTGHSALMELNYTPQNADGSISIEKAVAINEAFQISRQFWAHQVERGVLRTPRSFINTVPHMSFVWGEDNVNFLRARYAALQQSSLFRGMRYSEDHAQIKEWAPLVMEGRDPQQKVAATRTEIGTDVNYGEITRQLIASLQKKSNFSLQLSSEVRALKRNDDNTWTVTVADLKNGTAQNIRAKFVFIGAGGAALKLLQESGIPEAKDYAGFPVGGQFLVSENPDVVNHHLAKVYGKASVGAPPMSVPHIDTRVLDGKRVVLFGPFATFSTKFLKNGSLWDLMSSTTTSNVMPMMHVGLDNFDLVKYLVSQVMLSEEDRFEALKEYYPQAKKEDWRLWQAGQRVQIIKRDAEKGGVLRLGTEVVSDQQGTIAALLGASPGASTAAPIMLNLLEKVFGDRVSSPQWQATLKAIVPSYGRKLNGDVAATERELQYTSEVLGLNYDKPQAADSTPKPQLKPQPVQKEVADIAL
45321111100000000011023242233330000000000000000100221223110000122311132113112120000000020111233240201031010022002002200110142222422321012001000010331031022002102412113102102222102300110132232322000010321110000200210021025323110101020210222433210010011432221102010000000000020033131331320000001010010322200331202000201220120101101010021220010001021012123212011002101122002001100110200210022011113310310330023033300201210100100243244211020121001233000000101010000001000200220012212233012103310121234132121002200310031020323423213222333132322333223234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKKVTAMLFSMAVGLNAVSMAAKAKASEEQETDVLLIGGGIMSATLGTYLRELEPEWSMTMVERLEGVAQESSNGWNNAGTGHSALMELNYTPQNADGSISIEKAVAINEAFQISRQFWAHQVERGVLRTPRSFINTVPHMSFVWGEDNVNFLRARYAALQQSSLFRGMRYSEDHAQIKEWAPLVMEGRDPQQKVAATRTEIGTDVNYGEITRQLIASLQKKSNFSLQLSSEVRALKRNDDNTWTVTVADLKNGTAQNIRAKFVFIGAGGAALKLLQESGIPEAKDYAGFPVGGQFLVSENPDVVNHHLAKVYGKASVGAPPMSVPHIDTRVLDGKRVVLFGPFATFSTKFLKNGSLWDLMSSTTTSNVMPMMHVGLDNFDLVKYLVSQVMLSEEDRFEALKEYYPQAKKEDWRLWQAGQRVQIIKRDAEKGGVLRLGTEVVSDQQGTIAALLGASPGASTAAPIMLNLLEKVFGDRVSSPQWQATLKAIVPSYGRKLNGDVAATERELQYTSEVLGLNYDKPQAADSTPKPQLKPQPVQKEVADIAL
1	MUSTER	3dmeA	0.148	0.664	1.614	threading_1	-----------------------------TDIDCIVIGAGVVGLAIARALAAG--GHEVLVAEAAEGIGTGTS--SRNSEVIHAG---IYYPADS-------LKARLCVRGKHLLYEYCAAR-----VP-----HQRLGKLIVATSDAEASQLDSIARRAGANGV-DDLQHI-DGAAARRLEPAL-------HCTAALVSPSTGIVDSHALMLAYQGDAESD-GAQLVFHTPLIAGRVRPEGGFELDFG---GAEPMTLSCRVLINAAGLHAPGLARRIGIPRDSIPPEYLCKGSYFTLAGR---APFSRLIYPVPQHAG--LGV-HL-TLDLGGQ--AKFGPDTEWI----ATEDY-----TLDPRRA-------------------------DVFYAAVRSYWPALPDGALAPGYTGIRPKI-SGPHEPAADFAIAGPASHGVAGLVNLYGIESPGLTASLAIAEETLARLA--------------------------------------------------------------------------
2	SPARKS	3dmea	0.148	0.666	3.356	threading_2	-----------------------------TDIDCIVIGAGVVGLAIARALAA--GGHEVLVAEAAEGIGTGTS--SRNSEVIHAGI---YYPADS-------LKARLCVRGKHLLYEYCAAR---GVP------HQRLGKLIVATSDAEASQLDSIARRAGANGV-DDLQHI-DGAAARRLEPAL-------HCTAALVSPSTGIVDSHALMLAYQGDAESD-GAQLVFHTPLIAGRVRPEGGFELDF---GGAEPMTLSCRVLINAAGLHAPGLARRIGIPRDSIPPEYLCKGSYFTLAGR---APFSRLIYPVPQHA----GLGVHLTLDLGGQ--AKFGPDTEWI-ATEDYTLDPRRADV---------------------------------FYAAVRSYWPALPDGALAPGYTGIRPKI-SGPHEPAADFAIAGPASHGVAGLVNLYGIESPGLTASLAIAEETLARLA--------------------------------------------------------------------------
3	PROSPECT2	3dmeA	0.145	0.666	2.372	threading_3	-----------------------------TDIDCIVIGAGVVGLAIARALAA--GGHEVLVAEAAEGIGTGTSSR--NSEVIHAGI---YYPADS-------LKARLCVRGKHLLYEYCA---ARGVP------HQRLGKLIVATSDAEASQLDSIARRAGANGV-DDLQHID-GAAARRLEPAL-------HCTAALVSPSTGIVDSHALMLAYQGDAESD-GAQLVFHTPLIAGRVRPEGGFELDF---GGAEPMTLSCRVLINAAGLHAPGLARRIGIPRDSIPPEYLCKGSYFTLAGRA---PFSRLIYPVPQHAGLGVHL------TLDLGGQAKFGPDTEWIATEDYTLDPRRA----------------------------------DVFYAAVRSYWPALPDGALAPGYTGIRPK-ISGPHEPAADFAIAGPASHGVAGLVNLYGIESPGLTASLAIAEETLARL--------------------------------------------------------------------------A
4	PPA-I	3dmeA	0.142	0.666	3.215	threading_4	-----------------------------TDIDCIVIGAGVVGLAIARALAAG--GHEVLVAEAAEGIGTGTS--SRNSEVIHAGI---YYPADS-------LKARLCVRGKHLLYEYCAARG---------VPHQRLGKLIVATSDAEASQLDSIARRAGANGV-DDLQHI-DGAAARRLEPAL-------HCTAALVSPSTGIVDSHALMLAYQGDAESD-GAQLVFHTPLIAGRVRPEGGFELDFG---GAEPMTLSCRVLINAAGLHAPGLARRIGIPRDSIPPEYLCKGSYFTLAGR---APFSRLIYPVPQHAG--LGVH----LTLDLGGQAKFGPDTEWIATEDY---------TLDPRRA-------------------------DVFYAAVRSYWPALPDGALAPGYTGIRPKI-SGPHEPAADFAIAGPASHGVAGLVNLYGIESPGLTASLAIAEETLARLA--------------------------------------------------------------------------
5	HHPRED-l	3da1_A	0.174	0.714	3.485	threading_5	--------------FSAKKRDKCIGE-SEKQLDLLVIGGGITGAGIALDAQVR--GIQTGLVE-ND-FASGTSS--RSTKLVHG-----------------------VGKERAIVYENAPHVTT------------PEW-LLPIF-----------------------RY-L-NEKQTLEKEPLLRK-----ENLKGGGIYVEYRTDDARLTLEI-KEAVARGA-VALNY-KVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDRSK---HGKLKLSKGVHLVVDQSRF-PLRQAVYFD-TSDGR-IFAIP-----RE-GK--TYIGTTDTFY-----DKDIA----S---------PR-TVED---RDYI-----------LAAANY-FPRLTADDVESSWAGLRPLIH-E-----------DEIFFSDSGLISIAGGKL---TGYRK-AERTVDAVAQGLNVEPCTTAASRKGA-KLGFDADEVRRLAKLYGSNVDHVLNYAYEGKEEAEHYGPALLLGQLQYGVEQE-V-
6	HHPRED-g	3dme_A	0.140	0.662	2.225	threading_6	-----------------------------TDIDCIVIGAGVVGLAIARALAAG--GHEVLVAEAAEGIGTGTS--SRNSEVIHAGIY---Y-P---ADSLK------ARLCVR-GKHLLYEYCAARGVP-----HQRLGKLIVATSDAEASQLDSIARRAGANGVD-DLQH-IDGAAARRLEPALH-------CTAALVSPSTGIVDSHALMLAYQGDAESD-GAQLVFHTPLIAGRVRPEGGFELDF---GGAEPMTLSCRVLINAAGLHAPGLARRIGIPRDSIPPEYLCKGSYFTLAGRAPFS---RLIY-----PVPQHAGLGVHLT-LDLGGQAKFGPDTEWIAT-------EDY--TLDPR--------------RA-----------DVFYAAVRSYWPALPDGALAPGYTGIRPKISGPHPAADFAIA-G-PASHGVAG-LVNLYGIEPGLTAS-LAIAEETLARLA-------------------------------------------------------------------------
7	SP3	3dmea	0.151	0.666	3.527	threading_7	-----------------------------TDIDCIVIGAGVVGLAIARALAA--GGHEVLVAEAAEGIGTGTS--SRNSEVIHAGI---YYPADS-------LKARLCVRGKHLLYEYCAAR---GVP------HQRLGKLIVATSDAEASQLDSIARRAGANGVD-DLQHI-DGAAARRLEPAL-------HCTAALVSPSTGIVDSHALMLAYQGDAESD-GAQLVFHTPLIAGRVRPEGGFELDF---GGAEPMTLSCRVLINAAGLHAPGLARRIEIPRDSIPPEYLCKGSYFTLAGR---APFSRLIYPVPQH--AGLGV-HL-TLDLGGQ--AKFGPDTEWI-ATEDYTLDPRRADV---------------------------------FYAAVRSYWPALPDGALAPGYTGIRPK-ISGPHEPAADFAIAGPASHGVAGLVNLYGIESPGLTASLAIAEETLARLA--------------------------------------------------------------------------
8	SAM-T99	3dmeA	0.146	0.661	3.217	threading_8	-----------------------------TDIDCIVIGAGVVGLAIARALAAG--GHEVLVAEAAEGIGTGTSS--RNSEVIHAG---IYYPADSL-------KARLCVRGKHLLYEYCAAR---------GVPHQRLGKLIVATSDAEASQLDSIARRAGANGV-DDLQH-IDGAAARRLEPAL-------HCTAALVSPSTGIVDSHALMLAYQGDA-ESDGAQLVFHTPLIAGRVRPEGGFELDFGG---AEPMTLSCRVLINAAGLHAPGLARIEGIPRDSIPPEYLCKGSYFTLAGRAPFSRL---IYPVP---QHAGLGVHL-TLDLGGQ--AKFGPD----------------TEWIATEDYT--------------------LDPRRAFYAAVRSYWPALPDGALAPGYTGIRPKISGPHEPA-ADFAIAGPASHGVAGLVNLYGIESPGLTASLAIAEETLARL---------------------------------------------------------------------------
9	MUSTER	1y56B	0.147	0.672	1.203	threading_9	---------------------------LPEKSEIVVIGGGIVGVTIAHELAKR--GEEVTVIEK-RFIGSGST--FRCGTGIRQ-----QFND------------EANVRVMKRSVELWKKYSEEGF-----SF-KQTGYLFLLYDDEEVKTFKRNIEIQNKFGV--PTKLI-TPEEAKEIVPLL----DISEVIAASWNPTDGKADPFEATTAFAVKAKEY-GAKLLEYTEVKGFLIENNEIKGVKTN------KGIIKTGIVVNATNAWANLINAMAGIKT--KIPIEPYKHQAVITQPIK------------GTINPMVISFKYGHAYLTTFHGGIIGGIGYEIGPTYDLTPT----------------------------------YEFLREVSYYFTKIIPALKNLLILRTWAGYYAKT--PD----SNPAIGRI---ELNDYYIAAGFSGHGFMMAPAVGEMVAELITKGKTKLP-----VEWYDPYFERELR-------------------------------------------------
10	SPARKS	3nyca	0.182	0.693	2.542	threading_10	----------------------HHHHHHPIEADYLVIGAGIAGASTGYWLSAHG---RVVVLEREAQPGYHST--GRSA-----AHYTVAYGT------------PQVRALTAASRAFFDNP-PAGFCEHP--LLSPRP-EMVVDFSDDPEELRRQYESGKALVP--QMRLL-DAEQACSIVPVL----RRDKVFGATYDPTGADIDTDALHQGYLRGIRRN-QGQVLCNHEALEIRRV-DGAWEVRC------DAGSYRAAVLVNAAGAWCDAIAGLAGVRP---LGLQPKRRSAFIFAPPP----------GIDCHDWPMLVSLDESFYLKPDAGMLLGSPANADP---------------VEAHDVQP----EQLDIATGMYLIEEA---------------TTLTIRRPEHTWAGLRSF--VAD----GDLVAGY--AANAEGFFWVAAQGGYGIQTSAAMGEASAALIRHQPLPAHLR---------EHGLDEAMSPRRLSP-----------------------------------------

Predicted Tertiary Structure


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TM-score=0.704 to 2gb0B SCOP code=c.3.1.2	TM-score=0.704 to 2gb0B SCOP code=c.3.1.2	TM-score=0.707 to 2gb0B SCOP code=c.3.1.2	TM-score=0.711 to 2gb0B SCOP code=c.3.1.2	TM-score=0.700 to 2gb0B SCOP code=c.3.1.2