Template-based Modeling Results for MRED_ECOLI


  Submitted Primary Sequence

>Length 162
MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ
542231313100000000000020000131021010100000000000001230100000000000000100110000000000000001101001102100100000000000100100010001212120200010001000000000002211121234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ
1PROSPECT21t33A0.1300.9511.101threading_1MNIPTTTTKYLACAQWIADFLGEKFSQPAPDRDAIRELILLACKNMIMLLTQE---DTVNLSKFISREQLSPTSAYQLVHEQVIDPLHTHLTRLVAANDTRMILHTHALLGEVLAFRLGKETILLRTGWPQFDEEKAELIYQTVTCHIDLILHGLT-----Q
2PPA-I1t33A0.0770.9571.047threading_2ACAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLACKNMIMLLTQEDTVNLSKFISREQLSPTSAYQLVHEQVIDPLHTHLTRLVAAYTGCDMILHTHALLGEVLAFRLGKETILLRTGWPQFD--EEKAELIYQTVTCHIDLILHGLTQ-----
3PPA-I1pw4A20.0960.9691.009threading_3QYVLPNKLLWYIAIANVFVYLLRY-----GILDWSPTYLKLDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKFTGLFGYLGGSVAASAIVGYTVDFFGWDGGF
4MUSTER3p5nA0.1410.9200.890threading_4-----QQNKRLITISMLSAIAFVLTPIPFLPPYLTSDVPSLLATF-----P--AGIIVALVKNLLNYLFSMDPVGPFANFLAGASFLLTAYAIYKNKRSTKSLITGLIIATIVMTIVLSILNYFVLLPLYGSGIIPFNIIKGIVISIVFILLYRRLANF-LK
5SPARKS2wuda0.0950.8460.843threading_5SDKRAEHGQFNRYAAMALKGLFDQLGLGRVPLVGN-ALGGGTAVRFALDYPARAG-------RL---VLMGPG--------------GLSINLFAPDPTEGVKRLSKFSVAPTRENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGA
6PROSPECT21oyzA0.0801.0000.987threading_6YQKRKASDKNYIRRDIGAFILGQIKICKKCEDNVKSACVRATAIESTAQRCKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAISVTIPLLINLLKDPNGDVRNWAAFAININKYDNSDIRDCFVELQDKNEEVRIEAIIGLSVLSVLCDELTSAIDKLKRS
7PPA-I3p5nA0.1270.9690.998threading_7-----QQNKRLITISMLSAIAFVLTPIPFLPPYLTLDFSDVPSLLATFTFGPVAGIIVALVKNLLNYLFSMGPVGPFANFLAGASFLLTAYAIYKNKRSTKSLITGLIIATIVMTIVLSILNYFVLLPLYGSGIIPFNIIKGIVISIVFILLYRRLANFLKR
8HHPRED-l3f7c_A0.1300.4260.763threading_8--------------------------------------------------------------------------------------NANQFLKAVSQLQGWRECAFL--LALAERSFPNYALFADAVGLKTGGK-RQLLD--LAWD-LQKDLSKLETLCGV-
9HHPRED-g3p5n_A0.1410.8770.853threading_9-------NKRLITISMLSAIALTFFPPFLP-PYLTLDFSDVPSLLATFTFGPVAGIIVALVKNLLNYLFSGDPVGPNFLAGASFLLTAYAIYKNK--RS-TKSLITGLIIATIMTIVLSILNYFYGM----KVIIKGIVISIVFIL----LYRRLANFLK-R
10SP32xwub0.0940.9810.528threading_10LMKQIHKTSQCMWLMQALGFLLSALQVEEILKNLHSLISPY-IQQLEKLAEEIPNLAIVHILGLLSNLFTTLDISHPNPVVVVLQQVFQLIQKVLSKWL-NDAQVVEAVCAIFEKSVKTLLDDFAPMV-PQLCEMLGRMYSTIPQASALDLTRQLVHIFAHE

  Predicted Tertiary Structure

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TM-score=0.830 to 1t33A
SCOP code=a.4.1.9
TM-score=0.853 to 1t33A
SCOP code=a.4.1.9
TM-score=0.819 to 1pw4A
SCOP code=f.38.1.1
TM-score=0.495 to 1tuaA
SCOP code=d.51.1.1
TM-score=0.863 to 2fbqA
SCOP code=a.4.1.9