Template-based Modeling Results for NANE_ECOLI

Submitted Primary Sequence

>Length 229
MSLLAQLDQKIAANGGLIVSCQPVPDSPLDKPEIVAAMALAAEQAGAVAIRIEGVANLQATRAVVSVPIIGIVKRDLEDSPVRITAYIEDVDALAQAGADIIAIDGTDRPRPVPVETLLARIHHHGLLAMTDCSTPEDGLACQKLGAEIIGTTLSGYTTPETPEEPDLALVKTLSDAGCRVIAEGRYNTPAQAADAMRHGAWAVTVGSAITRLEHICQWYNTAMKKAVL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSLLAQLDQKIAANGGLIVSCQPVPDSPLDKPEIVAAMALAAEQAGAVAIRIEGVANLQATRAVVSVPIIGIVKRDLEDSPVRITAYIEDVDALAQAGADIIAIDGTDRPRPVPVETLLARIHHHGLLAMTDCSTPEDGLACQKLGAEIIGTTLSGYTTPETPEEPDLALVKTLSDAGCRVIAEGRYNTPAQAADAMRHGAWAVTVGSAITRLEHICQWYNTAMKKAVL
CCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCEEEECCHHCCHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSLLAQLDQKIAANGGLIVSCQPVPDSPLDKPEIVAAMALAAEQAGAVAIRIEGVANLQATRAVVSVPIIGIVKRDLEDSPVRITAYIEDVDALAQAGADIIAIDGTDRPRPVPVETLLARIHHHGLLAMTDCSTPEDGLACQKLGAEIIGTTLSGYTTPETPEEPDLALVKTLSDAGCRVIAEGRYNTPAQAADAMRHGAWAVTVGSAITRLEHICQWYNTAMKKAVL
4332212212220221000002023312223230000001003210010010211200210230120001000222133031200111310210030201000000132232221310111032320000000000300100240000000000111222322331111003001402020002031201210110041001000000000103200210130033214
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSLLAQLDQKIAANGGLIVSCQPVPDSPLDKPEIVAAMALAAEQAGAVAIRIEGVANLQATRAVVSVPIIGIVKRDLEDSPVRITAYIEDVDALAQAGADIIAIDGTDRPRPVPVETLLARIHHHGLLAMTDCSTPEDGLACQKLGAEIIGTTLSGYTTPETPEEPDLALVKTLSDAGCRVIAEGRYNTPAQAADAMRHGAWAVTVGSAITRLEHICQWYNTAMKKAVL
1	MUSTER	3q58A	0.667	0.969	2.726	threading_1	ASLLARLEQSVHENGGLIVSCQPVPGSPDK--PEIVAAAQAAASAGAVAVRIEGIENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLHGL-LAADCSTVNEGISCHQKGIEFIGTTLSGYTGPITPVEPDLA-VTQLSHAGCRVIAEGRYNTPALAANAIEHGAWAVTVGSAITRIEHICQWFSHAVKR---
2	SPARKS	3igsa	0.778	0.983	4.095	threading_2	ASLLEQLDKNIAASGGLIVSCQPVPGSPLDKPEIVA-AALAAEQAGAVAVRIEGIDNL-RTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIH-HHHLLTADCSSVDDGLACQRLGADIIGTT-SGYTTPDTPEEPDLPLVKALHDAGCRVIAEGRYNSPALAAEAIRYGAWAVTVGSAITRLEHICGWYNDALKKAAS
3	PROSPECT2	3q58A	0.653	0.969	3.401	threading_3	ASLLARLEQSVHENGGLIVSCQPVPGSPDK--PEIVAAAQAAASAGAVAVRIEGIENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIR-LHGLLAADCSTVNEGISCHQKGIEFIGTTLSGYTGPITPVEPDLAVTQ-LSHAGCRVIAEGRYNTPALAANAIEHGAWAVTVGSAITRIEHICQWFSHAVKR---
4	PPA-I	1yxyA	0.372	0.974	3.293	threading_4	--KPTKEKLMEQLKGGIIVSCQALPGEPLYSETIMPLMAKAAQEAGAVGIRANSVRDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAMDCTKRDRHDGIASFIRQVKEPNQLLMADISTFDEGLVAHQAGIDFVGTTLSGYTPYSRQAGPDVALIEALCKAGIAVIAEGKIHSPEEAKKINDLGVAGIVVGGAITRPKEIAERFIEALK----
5	HHPRED-l	3q58_A	0.710	0.965	2.863	threading_5	-SLLARLEQSVHENGGLIVSCQPVPGSP-DKPEIVAA-AQAAASAGAVAVRIEGIENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLHGLLA-ADCSTVNEGISCHQKGIEFIGTTLSGYTGPITPVEPDLA-VTQLSHAGCRVIAEGRYNTPALAANAIEHGAWAVTVGSAITRIEHICQWFSHAVKR---
6	HHPRED-g	3q58_A	0.710	0.965	3.827	threading_6	-SLLARLEQSVHENGGLIVSCQPVPGSP-DKPEIVAA-AQAAASAGAVAVRIEGIENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLHGLLA-ADCSTVNEGISCHQKGIEFIGTTLSGYTGPITPVEPDLA-VTQLSHAGCRVIAEGRYNTPALAANAIEHGAWAVTVGSAITRIEHICQWFSHAVKR---
7	SP3	3igsa	0.778	0.983	4.845	threading_7	ASLLEQLDKNIAASGGLIVSCQPVPGSPLDKPEIVA-AALAAEQAGAVAVRIEGIDNL-RTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIH-HHHLLTADCSSVDDGLACQRLGADIIGTT-SGYTTPDTPEEPDLPLVKALHDAGCRVIAEGRYNSPALAAEAIRYGAWAVTVGSAITRLEHICGWYNDALKKAAS
8	SAM-T99	1yxyA	0.377	0.974	4.854	threading_8	--KPTKEKLMEQLKGGIIVSCQALPGEPLYSGGIMPLMAKAAQEAGAVGIRANSVRDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAMDCTKRDRHDGLFIRQVKEKYPNQLLMADISTFDEGLVAHQAGIDFVGTTLSGYTPYSRQEGPDVALIEALCKAGIAVIAEGKIHSPEEAKKINDLGVAGIVVGGAITRPKEIAERFIEALK----
9	MUSTER	1yxyA	0.377	0.974	2.673	threading_9	--KPTKEKLMEQLKGGIIVSCQALPGEPLYSETIMPLMAKAAQEAGAVGIRANSVRDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAMDCTKRDRHLDIASFIRQVKEPNQLLMADISTFDEGLVAHQAGIDFVGTTLSGYTPYSRQEAPDVALIEALCKAGIAVIAEGKIHSPEEAKKINDLGVAGIVVGGAITRPKEIAERFIEALK----
10	SPARKS	3q58a	0.649	0.969	3.962	threading_10	ASLLARLEQSVHENGGLIVSCQPVPGSPDKPEIVA--AAQAAASAGAVAVRIEGIENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIR-LHGLLAADCSTVNEGISCHQKGIEFIGTTLSGYTGPITPVEPDLAV-TQLSHAGCRVIAEGRYNTPALAANAIEHGAWAVTVGSAITRIEHICQWFSHAVKR---

Predicted Tertiary Structure


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TM-score=0.895 to 1yxyA SCOP code=c.1.2.5	TM-score=0.891 to 1yxyA SCOP code=c.1.2.5	TM-score=0.889 to 1yxyA SCOP code=c.1.2.5	TM-score=0.891 to 1yxyA SCOP code=c.1.2.5	TM-score=0.962 to 1yxyA SCOP code=c.1.2.5