Template-based Modeling Results for NUDC_ECOLI


  Submitted Primary Sequence

>Length 257
MDRIIEKLDHGWWVVSHEQKLWLPKGELPYGEAANFDLVGQRALQIGEWQGEPVWLVQQQRRHDMGSVRQVIDLDVGLFQLAGRGVQLAEFYRSHKYCGYCGHEMYPSKTEWAMLCSHCRERYYPQIAPCIIVAIRRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQPWPFPQSLMTAFMAEYDSGDIVIDPKELLEANWYRYDDLPLLPPPGTVARRLIEDTVAMCRAEYE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDRIIEKLDHGWWVVSHEQKLWLPKGELPYGEAANFDLVGQRALQIGEWQGEPVWLVQQQRRHDMGSVRQVIDLDVGLFQLAGRGVQLAEFYRSHKYCGYCGHEMYPSKTEWAMLCSHCRERYYPQIAPCIIVAIRRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQPWPFPQSLMTAFMAEYDSGDIVIDPKELLEANWYRYDDLPLLPPPGTVARRLIEDTVAMCRAEYE
CCHHHCCCCCEEEEEEECCEEEECCCCCCCCCHHHCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCCEEEEEEEECCEEEEEECCCCCCCCEECCCCCCCCCCCHHHHHCEEHHCCCCEEEEEEEEEEEECCCCCCEEEEEEEEEECCCCCCCCHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MDRIIEKLDHGWWVVSHEQKLWLPKGELPYGEAANFDLVGQRALQIGEWQGEPVWLVQQQRRHDMGSVRQVIDLDVGLFQLAGRGVQLAEFYRSHKYCGYCGHEMYPSKTEWAMLCSHCRERYYPQIAPCIIVAIRRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQPWPFPQSLMTAFMAEYDSGDIVIDPKELLEANWYRYDDLPLLPPPGTVARRLIEDTVAMCRAEYE
43421242320000001221000241301213222021212100000213111010022344331120120120221002000100200101210300020123022143310010220222212310000000012331000011322431100001110122321320121122332102021010000111212100000000102323121213102302103131022012302001200220022033334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMDRIIEKLDHGWWVVSHEQKLWLPKGELPYGEAANFDLVGQRALQIGEWQGEPVWLVQQQRRHDMGSVRQVIDLDVGLFQLAGRGVQLAEFYRSHKYCGYCGHEMYPSKTEWAMLCSHCRERYYPQIAPCIIVAIRRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQPWPFPQSLMTAFMAEYDSGDIVIDPKELLEANWYRYDDLPLLPPPGTVARRLIEDTVAMCRAEYE
1MUSTER2gb5A0.9280.9733.566threading_1HDRIIEKLDHGWWVVSHEQKLWLPKGELPYGEAANFDLVGQRALQIGEWQGEPVWLVQQQRRHDG-SVRQVIDLDVGLFQLAGRGVQLAEFYRSHKYCGYCGHEY--PSKTEWALCSHCRERYYPQIAPCIIVAIRRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREV-EESGIKVKNLRYVTSQPWPFPQSLTAFAEYDS--GDIVIDPKELLEANWYRYDDLPLLPPPGTVARRLIEDTVA-CRAEYE
2SPARKS1vk6a0.9160.9695.544threading_2HDRIIEKLDHGWWVVSHEQKLWLPKGELPYGEAANFDLVGQRALQIGEWQGEPVWLVQQQRRHDG-SVRQVIDLDVGLFQLAGRGVQLAEFYRSHKYCGYCGHEYPSKTEW--ALCSHCRERYYPQIAPCIIVAIRRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREV-EESGIKVKNLRYVTSQPWPFPQSLTAFAEY--DSGDIVIDPKELLEANWYRYDDLPLLPPPGTVARRLIEDTVACRAEY--
3PROSPECT21vk6A0.9280.9694.130threading_3HDRIIEKLDHGWWVVSHEQKLWLPKGELPYGEAANFDLVGQRALQIGEWQGEPVWLVQQQRRHDG-SVRQVIDLDVGLFQLAGRGVQLAEFYRSHKYCGYCGHEY--PSKTEWALCSHCRERYYPQIAPCIIVAIRRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREV-EESGIKVKNLRYVTSQPWPFPQSLT--AFAEYDSGDIVIDPKELLEANWYRYDDLPLLPPPGTVARRLIEDTVA--CRAEY
4PPA-I2gb5A0.9040.9735.244threading_4HDRIIEKLDHGWWVVSHEQKLWLPKGELPYGEAANFDLVGQRALQIGEWQGEPVWLVQQQRRHDG-SVRQVIDLDVGLFQLAGRGVQLAEFYRSHKYCGYCGHEY--PSKTEWALCSHCRERYYPQIAPCIIVAIRRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREV-EESGIKVKNLRYVTSQPWPFPQSLTAFAEYDS--GDIVIDPKELLEANWYRYDDLPLLPPPGTVARRLIEDTVACRAEYE-
5HHPRED-l1vk6_A1.0000.9655.962threading_5-DRIIEKLDHGWWVVSHEQKLWLPKGELPYGEAANFDLVGQRALQIGEWQGEPVWLVQQQRRHD-GSVRQVIDLDVGLFQLAGRGVQLAEFYRSHKYCGYCGHE-YPSKTEWA-LCSHCRERYYPQIAPCIIVAIRRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREV-EESGIKVKNLRYVTSQPWPFPQSL-TAF-AEYDSGDIVIDPKELLEANWYRYDDLPLLPPPGTVARRLIEDTVA-CRAEY-
6HHPRED-g1vk6_A1.0000.9656.184threading_6-DRIIEKLDHGWWVVSHEQKLWLPKGELPYGEAANFDLVGQRALQIGEWQGEPVWLVQQQRRHD-GSVRQVIDLDVGLFQLAGRGVQLAEFYRSHKYCGYCGHE-YPSKTEWA-LCSHCRERYYPQIAPCIIVAIRRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREV-EESGIKVKNLRYVTSQPWPFPQSL-TAF-AEYDSGDIVIDPKELLEANWYRYDDLPLLPPPGTVARRLIEDTVA-CRAEY-
7SP31vk6a0.9280.9695.296threading_7HDRIIEKLDHGWWVVSHEQKLWLPKGELPYGEAANFDLVGQRALQIGEWQGEPVWLVQQQRRHDG-SVRQVIDLDVGLFQLAGRGVQLAEFYRSHKYCGYCGHEYP--SKTEWALCSHCRERYYPQIAPCIIVAIRRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREV-EESGIKVKNLRYVTSQPWPFPQSLTAFAEY--DSGDIVIDPKELLEANWYRYDDLPLLPPPGTVARRLIEDTVACR-AEY-
8SAM-T992gb5A0.9390.9496.481threading_8HDRIIEKLDHGWWVVSHEQKLWLPKGELPYGEAANFDLVGQRALQIGEWQGEPVWLVQQQ-RRHDGSVRQVIDLDVGLFQLAGRGVQLAEFYRSHKYCGYCGHEYPSKTE--WALCSHCRERYYPQIAPCIIVAIRRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREV-EESGIKVKNLRYVTSQPWPFPQSLTA--FAEYDSGDIVIDPKELLEANWYRYDDLPLLPPPGTVARRLIEDTVA-------
9MUSTER3cngC0.2520.6031.777threading_9-----------------------------------------------------------------------------------------------KFCSQCGGEVILRDTLPRYICPKCHTIHYQNPKVIVGCIPEWENKVLLCKRAIAPRGKWTLPAGF-ENNETLVQGAARETLEEANARVEIRELYAVYSLPHIS-QVYLFRAKLLDLDFFPG-IESLEVRLFGEQEIPWND----IAFRVIHDPLKRYEERHH
10SPARKS3cnga0.2260.6192.996threading_10-----------------------------------------------------------------------------------------------KFCSQCGGEVILRDTLPRYICPKCHTIHYQNPKVIVGCIPEWENKVLLCKRAIAPRGKWTLPAGF-ENNETLVQGAARETLEEANARVEIRELYAVYSLPHIS-QVYLFRAKLLDLDFFPG-IESLEVRLFGEQEIPWNDIAFRVIHDPLKRYEERHHGQPA

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.597 to 1vc9A
TM-score=0.983 to native
SCOP code=d.113.1.1
TM-score=0.601 to 1vc9A
TM-score=0.989 to native
SCOP code=d.113.1.1
TM-score=0.595 to 1vc9A
TM-score=0.855 to native
SCOP code=d.113.1.1
TM-score=0.605 to 1vc9A
TM-score=0.864 to native
SCOP code=d.113.1.1
TM-score=0.597 to 1vc9A
TM-score=0.981 to native
SCOP code=d.113.1.1

  Experimental Structure

Download 2gb5A
SCOP code=d.113.1.1