Template-based Modeling Results for NUSG_ECOLI


  Submitted Primary Sequence

>Length 181
MSEAPKKRWYVVQAFSGFEGRVATSLREHIKLHNMEDLFGEVMVPTEEVVEIRGGQRRKSERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSDRPAPISDKEVDAIMNRLQQVGDKPRPKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKVSVSIFGRATPVELDFSQVEKA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSEAPKKRWYVVQAFSGFEGRVATSLREHIKLHNMEDLFGEVMVPTEEVVEIRGGQRRKSERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSDRPAPISDKEVDAIMNRLQQVGDKPRPKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKVSVSIFGRATPVELDFSQVEKA
CCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEECCCEEEEEEEECCEEEEEEEECCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEECCCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEECHHHEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSEAPKKRWYVVQAFSGFEGRVATSLREHIKLHNMEDLFGEVMVPTEEVVEIRGGQRRKSERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSDRPAPISDKEVDAIMNRLQQVGDKPRPKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKVSVSIFGRATPVELDFSQVEKA
4552332200000011111110020022104323233200100001121121333233212210020000010112310021032022000001123332121233101100231332233331211012121010121112312010221223412020001011220202022210123
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSEAPKKRWYVVQAFSGFEGRVATSLREHIKLHNMEDLFGEVMVPTEEVVEIRGGQRRKSERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSDRPAPISDKEVDAIMNRLQQVGDKPRPKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKVSVSIFGRATPVELDFSQVEKA
1MUSTER2xhcA20.4330.8673.978threading_1------KKWYIVLTMSGYEEKVKENIEKKVEATGIKNLVGRIVIPEER-------------RKLFPGYVFVEMIMNDEAYNFVRSVPYVMGFVSS-GGQPVPVKDREMRPILRLAG----LEEYELGFKVGDMVKIISGPFEDFAGVIKEIDPERQELKVNVTIFGRETPVVLHVSEVEKI
2SPARKS1m1ga0.4140.9615.265threading_2----LEKKWYALQVEPGKENEAKENLLKVLELEGLKDLVDEVIVPAEEKVVIRAQGKIVLDNKIFPGYILIKAHMNDKLLMAIEKTPHVFRPVMVGG-KPVPLKEEEVQNILNQIKRG--VKPSKVEFEKGDQVRVIEGPFMNFTGTVEEVHPEKRKLTVMISIFGRMTPVELDFDQVEKI
3PROSPECT22xhcA20.4330.8674.244threading_3------KKWYIVLTMSGYEEKVKENIEKKVEATGIKNLVGRIVIPEER-------------RKLFPGYVFVEMIMNDEAYNFVRSVPYVMGFVSS-GGQPVPVKDREMRPILRLA----GLEEYELGFKVGDMVKIISGPFEDFAGVIKEIDPERQELKVNVTIFGRETPVVLHVSEVEKI
4PPA-I2xhcA20.4330.8674.453threading_4------KKWYIVLTMSGYEEKVKENIEKKVEATGIKNLVGRIVIPEER-------------RKLFPGYVFVEMIMNDEAYNFVRSVPYVMGFVSS-GGQPVPVKDREMRPILRLAG----LEEYELGFKVGDMVKIISGPFEDFAGVIKEIDPERQELKVNVTIFGRETPVVLHVSEVEKI
5HHPRED-l1m1h_A0.3210.6195.647threading_5----QEKKWYALQVEPGKENEAKENLLKVLELEGLKDLVDEVIVPAEEKVVIRTEAKIVLDNKIFPGYILIKAHMNDKLLMAIEKTPHVFRPVMVG-GKPVPLKEEEVQNILNQIKR----------------------------------------------------------------
6HHPRED-g1m1h_A0.3210.6196.526threading_6----QEKKWYALQVEPGKENEAKENLLKVLELEGLKDLVDEVIVPAEEKVVIRTEAKIVLDNKIFPGYILIKAHMNDKLLMAIEKTPHVFRPVMV-GGKPVPLKEEEVQNILNQIKR----------------------------------------------------------------
7SP31m1ga0.4140.9614.990threading_7L----EKKWYALQVEPGKENEAKENLLKVLELEGLKDLVDEVIVPAEEKVVIRAEAKIVLDNKIFPGYILIKAHMNDKLLMAIEKTPHVFRPVMV-GGKPVPLKEEEVQNILNQIKRG--VKPSKVEFEKGDQVRVIEGPFMNFTGTVEEVHPEKRKLTVMISIFGRMTPVELDFDQVEKI
8SAM-T992xhcA20.4330.8675.261threading_8------KKWYIVLTMSGYEEKVKENIEKKVEATGIKNLVGRIVIPEER-------------RKLFPGYVFVEMIMNDEAYNFVRSVPYVMGFVSS-GGQPVPVKDREMRPILRLA----GLEEYELGFKVGDMVKIISGPFEDFAGVIKEIDPERQELKVNVTIFGRETPVVLHVSEVEKI
9MUSTER2k06A1.0000.6802.556threading_9MSEAPKKRWYVVQAFSGFEGRVATSLREHIKLHNMEDLFGEVMVPTEEVVEIRGGQRRKSERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSDRPAPISDKEVDAIMNRLQQVGDKPR----------------------------------------------------------
10SPARKS2k06a1.0000.6804.256threading_10MSEAPKKRWYVVQAFSGFEGRVATSLREHIKLHNMEDLFGEVMVPTEEVVEIRGGQRRKSERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSDRPAPISDKEVDAIMNRLQQVGDKPR----------------------------------------------------------

  Predicted Tertiary Structure

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TM-score=0.654 to 1nppA
SCOP code=b.114.1.1
TM-score=0.651 to 1nppA
SCOP code=b.114.1.1
TM-score=0.764 to 1nppA
SCOP code=b.114.1.1
TM-score=0.648 to 1nppA
SCOP code=b.114.1.1
TM-score=0.654 to 1nppA
SCOP code=b.114.1.1