Template-based Modeling Results for PAGP_ECOLI


  Submitted Primary Sequence

>Length 186
MNVSKYVAIFSFVFIQLISVGKVFANADEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRFQF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNVSKYVAIFSFVFIQLISVGKVFANADEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRFQF
CCHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHEECCCCCCCCEECCCCEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MNVSKYVAIFSFVFIQLISVGKVFANADEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRFQF
551220110000000101000211220330021012001310422321100000000002011233102311321100000102112401000000000111133111000100100011113330200000000000112111010000000000111200000010111231000000001032
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMNVSKYVAIFSFVFIQLISVGKVFANADEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRFQF
1MUSTER1mm5A0.9940.8714.097threading_1------------------------MNADEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRFQF
2SPARKS1mm4a0.9940.8715.434threading_2------------------------MNADEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRFQF
3PROSPECT21mm4a0.9940.8713.241threading_3MNA------------------------DEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRFQF
4PPA-I1mm5A0.9940.8718.530threading_4------------------------MNADEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRFQF
5HHPRED-l3gp6_A0.9930.82312.855threading_5------------------------MNADEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAY--------NERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRFQ-
6HHPRED-g3gp6_A0.9940.82811.535threading_6------------------------MNADEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAY--------NERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRFQF
7SP31mm4a0.9940.8712.381threading_7------------------------MNADEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRFQF
8SAM-T991mm5A0.9940.87111.111threading_8------------------------MNADEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRFQF
9MUSTER1ib1E0.2010.8010.600threading_9LTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTLCPELWFVEGRLVAFIIGSLWD-------------EERLTQESLALHR--PRGHSAHLHALAVHRSFRQ-----GKGSVLLWRYLHH---AQPAVRRAVLMCED--ALVPF------QRFGFHPAGPCAIVV------GSLTFTEMHCSL
10SPARKS1nsla0.1760.8230.699threading_10LEPKDAERLAELIIQNQQRLGKFFSSADTYRETIIPDWRRQYADLNGIEAGLLY-----------------DGSL--CGISLHNLDQVNRKAEIGYWIAKEFEGK-----GIITAAC-RKLITYAFELELNRVAICAAVGNEKSRAV-----PERIGF---LEEGKARDGLYVNGLVYYSLLKREW

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.814 to 1mm5A
TM-score=0.623 to native
SCOP code=f.4.1.2
TM-score=0.815 to 1mm5A
TM-score=0.605 to native
SCOP code=f.4.1.2
TM-score=0.613 to 1mm5A
TM-score=0.577 to native
SCOP code=f.4.1.2
TM-score=0.602 to 1mm5A
TM-score=0.582 to native
SCOP code=f.4.1.2
TM-score=0.814 to 1mm5A
TM-score=0.623 to native
SCOP code=f.4.1.2

  Experimental Structure

Download 3gp6A
SCOP code=f.4.1.1