Template-based Modeling Results for PHOQ_ECOLI

Submitted Primary Sequence

>Length 486
MKKLLRLFFPLSLRVRFLLATAAVVLVLSLAYGMVALIGYSVSFDKTTFRLLRGESNLFYTLAKWENNKLHVELPENIDKQSPTMTLIYDENGQLLWAQRDVPWLMKMIQPDWLKSNGFHEIEADVNDTSLLLSGDHSIQQQLQEVREDDDDAEMTHSVAVNVYPATSRMPKLTIVVVDTIPVELKSSYMVWSWFIYVLSANLLLVIPLLWVAAWWSLRPIEALAKEVRELEEHNRELLNPATTRELTSLVRNLNRLLKSERERYDKYRTTLTDLTHSLKTPLAVLQSTLRSLRSEKMSVSDAEPVMLEQISRISQQIGYYLHRASMRGGTLLSRELHPVAPLLDNLTSALNKVYQRKGVNISLDISPEISFVGEQNDFVEVMGNVLDNACKYCLEFVEISARQTDEHLYIVVEDDGPGIPLSKREVIFDRGQRVDTLRPGQGVGLAVAREITEQYEGKIVAGESMLGGARMEVIFGRQHSAPKDE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKLLRLFFPLSLRVRFLLATAAVVLVLSLAYGMVALIGYSVSFDKTTFRLLRGESNLFYTLAKWENNKLHVELPENIDKQSPTMTLIYDENGQLLWAQRDVPWLMKMIQPDWLKSNGFHEIEADVNDTSLLLSGDHSIQQQLQEVREDDDDAEMTHSVAVNVYPATSRMPKLTIVVVDTIPVELKSSYMVWSWFIYVLSANLLLVIPLLWVAAWWSLRPIEALAKEVRELEEHNRELLNPATTRELTSLVRNLNRLLKSERERYDKYRTTLTDLTHSLKTPLAVLQSTLRSLRSEKMSVSDAEPVMLEQISRISQQIGYYLHRASMRGGTLLSRELHPVAPLLDNLTSALNKVYQRKGVNISLDISPEISFVGEQNDFVEVMGNVLDNACKYCLEFVEISARQTDEHLYIVVEDDGPGIPLSKREVIFDRGQRVDTLRPGQGVGLAVAREITEQYEGKIVAGESMLGGARMEVIFGRQHSAPKDE
CCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEECCCCCEEEECCCHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHCCCHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEECCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKLLRLFFPLSLRVRFLLATAAVVLVLSLAYGMVALIGYSVSFDKTTFRLLRGESNLFYTLAKWENNKLHVELPENIDKQSPTMTLIYDENGQLLWAQRDVPWLMKMIQPDWLKSNGFHEIEADVNDTSLLLSGDHSIQQQLQEVREDDDDAEMTHSVAVNVYPATSRMPKLTIVVVDTIPVELKSSYMVWSWFIYVLSANLLLVIPLLWVAAWWSLRPIEALAKEVRELEEHNRELLNPATTRELTSLVRNLNRLLKSERERYDKYRTTLTDLTHSLKTPLAVLQSTLRSLRSEKMSVSDAEPVMLEQISRISQQIGYYLHRASMRGGTLLSRELHPVAPLLDNLTSALNKVYQRKGVNISLDISPEISFVGEQNDFVEVMGNVLDNACKYCLEFVEISARQTDEHLYIVVEDDGPGIPLSKREVIFDRGQRVDTLRPGQGVGLAVAREITEQYEGKIVAGESMLGGARMEVIFGRQHSAPKDE
453113222201120111001001010102111110000221212220110120100000100213332010201321323010000001331100002220220142012310432113302131221011022232013212312333331201000000012122422200000022122112001100000000000000000000000011002002200210331343333222221241012003101400311231121022002200310200000010002003333222230122012102201300020021011322222232201012002200210141034321201020232010101131001000000210041023202010222342000101121320122103100210120222220200000001200330402020121332001010000333223548
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKKLLRLFFPLSLRVRFLLATAAVVLVLSLAYGMVALIGYSVSFDKTTFRLLRGESNLFYTLAKWENNKLHVELPENIDKQSPTMTLIYDENGQLLWAQRDVPWLMKMIQPDWLKSNGFHEIEADVNDTSLLLSGDHSIQQQLQEVREDDDDAEMTHSVAVNVYPATSRMPKLTIVVVDTIPVELKSSYMVWSWFIYVLSANLLLVIPLLWVAAWWSLRPIEALAKEVRELEEHNRELLNPATTRELTSLVRNLNRLLKSERERYDKYRTTLTDLTHSLKTPLAVLQSTLRSLRSEKMSVSDAEPVMLEQISRISQQIGYYLHRASMRGGTLLSRELHPVAPLLDNLTSALNKVYQRKGVNISLDISPEISFVGEQNDFVEVMGNVLDNACKYCLEFVEISARQTDEHLYIVVEDDGPGIPLSKREVIFDRGQRVDTLRPGQGVGLAVAREITEQYEGKIVAGESMLGGARMEVIFGRQHSAPKDE
1	HHPRED-l	3bqa_A	0.959	0.300	5.171	threading_1	------------------------------------------SFDKTTFRLLRGESNLFYTLAKWENNKLHVELPENIDKQSPTMTLIYDENGQLLWAQRDVPWLMKMIQPDWLKSNGFHEIEADVNDTSLLLSGDHSIQQQLQEVRQNNNNAQMTHSVAVNVYPATSRMPKLTIVVVDTIPVELKSS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2	SPARKS	2c2aa	0.216	0.467	3.957	threading_2	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEN------VTESKELERLKRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVPVEAYIDPTRIRQVLLNLLNNGVKYSKKDVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVD-----TGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKDR------
3	HHPRED-g	3bqa_A	0.959	0.300	3.571	threading_3	------------------------------------------SFDKTTFRLLRGESNLFYTLAKWENNKLHVELPENIDKQSPTMTLIYDENGQLLWAQRDVPWLMKMIQPDWLKSNGFHEIEADVNDTSLLLSGDHSIQQQLQEVRQNNNNAQMTHSVAVNVYPATSRMPKLTIVVVDTIPVELKSS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4	PPA-I	3dgeA	0.227	0.453	2.775	threading_4	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLGELKEFLEVIIDQSNHLENLLNELLDFSRLERKSLINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVPCEAYIDPTRIRQVLLNLLNNGVKYSKKDVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDSSLPGTGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKDRA-----
5	SP3	3a0ra	0.142	0.669	3.555	threading_5	-------------------------------------------------------------------------FSESILESLETAIITLSKDGRITEWNKKAEQLFGLKKENVLGRR-LKDLPDFEEIGSVAES---VFENKEPVFLNFYKFGERYFNIRFSPRNAKTQLLEGVIITIDDVTELYKYEEERK----------------------------------RRERLSILG----------------------------------EMTARVAHEIRNPITIIGGFIMRMKKHLDTLKKYINIITNELSRLETIVKEILEYSKERV---LEFTEFNLNELIREVYVLFEEKIRKMNIDFCFETDNELRVEADRTRIKQVLINLVQNAIEATGENIKITSEDMYTKVRVSVWNSGPPIPEELKEKIFSPFF--------TTLGLSICRKIIEEHGGKIWTEN-RENGVVFIFEIPKTP----EK
6	HHPRED-g	2c2a_A	0.216	0.467	3.671	threading_6	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MENVT--E--------SKELERLKRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAYVKVIEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVD-----TGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKDR------
7	SP3	2c2aa	0.217	0.465	4.038	threading_7	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MNVTESKELERLKRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLGELKEFLEVIIDQSNHLENLLNELLDFSRLERKSLINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVPCEAYIDPTRIRQVLLNLLNNGVKYSKKDVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVD-----TGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKDR------
8	PPA-I	1yaxA	0.771	0.315	2.563	threading_8	-------------------------------------------MDKTTFRLLRGESNLFYTLAKWENNKISVELPENLDMQSPTMTLIYDETGKLLWTQRNIPWLIKSIQPEWLKTNGFHEIETNVDATSTLLSEDHSAQEKLKEVREDDDDAEMTHSVAVNIYPATARMPQLTIVVVDTIPIELKRSYMHHHHHH--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9	SAM-T99	3dgeA	0.230	0.447	5.342	threading_9	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRIDRMKTEFIANISHELRTPLTAIKAYAETIYELDLSLKEFLEVIIDQSNHLENLLNELLDFSRLEKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVPVEAYIDPTRIRQVLLNLLNNGVKYSKKDVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDSSLPGTGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPK--------
10	MUSTER	3a0rA	0.148	0.669	1.376	threading_10	-------------------------------------------------------------------------FSESILESLETAIITLSKDGRITEWNKKAEQLFGLKKENVLGRR-LKDL-PDFEEIGSVA--ESVFENKEPVFLNFYKFGERYFNIRFSPFRNATQLLEGVIITIDDVT-----------------------------------------------ELYKYEEER---------------------KRRERLSILGEMTARVAHEIRNPITIIGGFIMRMKKHPETLKKYINIITNELSRLETIVKEILEYSKERV---LEFTEFNLNELIREVYVLFEEKIRKMNIDFCFETDNELRVEADRTRIKQVLINLVQNAIEATGENIKITSEDMYTKVRVSVWNSGPPIPEELKEKIFSPFF--------TTLGLSICRKIIEDEGGKIWTEN-RENGVVFIFEIPKTP----EK

Predicted Tertiary Structure


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TM-score=0.398 to 1p0zA SCOP code=d.110.6.1	TM-score=0.565 to 1ys3B SCOP code=d.122.1.3	TM-score=0.398 to 1p0zA SCOP code=d.110.6.1	TM-score=0.560 to 1ys3B SCOP code=d.122.1.3	TM-score=0.557 to 1ys3B SCOP code=d.122.1.3