Template-based Modeling Results for PITA_ECOLI


  Submitted Primary Sequence

>Length 499
MLHLFAGLDLHTGLLLLLALAFVLFYEAINGFHDTANAVATVIYTRAMRSQLAVVMAAVFNFLGVLLGGLSVAYAIVHMLPTDLLLNMGSSHGLAMVFSMLLAAIIWNLGTWYFGLPASSSHTLIGAIIGIGLTNALMTGTSVVDALNIPKVLSIFGSLIVSPIVGLVFAGGLIFLLRRYWSGTKKRARIHLTPAEREKKDGKKKPPFWTRIALILSAIGVAFSHGANDGQKGIGLVMLVLIGVAPAGFVVNMNATGYEITRTRDAINNVEAYFEQHPALLKQATGADQLVPAPEAGATQPAEFHCHPSNTINALNRLKGMLTTDVESYDKLSLDQRSQMRRIMLCVSDTIDKVVKMPGVSADDQRLLKKLKSDMLSTIEYAPVWIIMAVALALGIGTMIGWRRVATTIGEKIGKKGMTYAQGMSAQMTAAVSIGLASYTGMPVSTTHVLSSSVAGTMVVDGGGLQRKTVTSILMAWVFTLPAAVLLSGGLYWLSLQFL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLHLFAGLDLHTGLLLLLALAFVLFYEAINGFHDTANAVATVIYTRAMRSQLAVVMAAVFNFLGVLLGGLSVAYAIVHMLPTDLLLNMGSSHGLAMVFSMLLAAIIWNLGTWYFGLPASSSHTLIGAIIGIGLTNALMTGTSVVDALNIPKVLSIFGSLIVSPIVGLVFAGGLIFLLRRYWSGTKKRARIHLTPAEREKKDGKKKPPFWTRIALILSAIGVAFSHGANDGQKGIGLVMLVLIGVAPAGFVVNMNATGYEITRTRDAINNVEAYFEQHPALLKQATGADQLVPAPEAGATQPAEFHCHPSNTINALNRLKGMLTTDVESYDKLSLDQRSQMRRIMLCVSDTIDKVVKMPGVSADDQRLLKKLKSDMLSTIEYAPVWIIMAVALALGIGTMIGWRRVATTIGEKIGKKGMTYAQGMSAQMTAAVSIGLASYTGMPVSTTHVLSSSVAGTMVVDGGGLQRKTVTSILMAWVFTLPAAVLLSGGLYWLSLQFL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MLHLFAGLDLHTGLLLLLALAFVLFYEAINGFHDTANAVATVIYTRAMRSQLAVVMAAVFNFLGVLLGGLSVAYAIVHMLPTDLLLNMGSSHGLAMVFSMLLAAIIWNLGTWYFGLPASSSHTLIGAIIGIGLTNALMTGTSVVDALNIPKVLSIFGSLIVSPIVGLVFAGGLIFLLRRYWSGTKKRARIHLTPAEREKKDGKKKPPFWTRIALILSAIGVAFSHGANDGQKGIGLVMLVLIGVAPAGFVVNMNATGYEITRTRDAINNVEAYFEQHPALLKQATGADQLVPAPEAGATQPAEFHCHPSNTINALNRLKGMLTTDVESYDKLSLDQRSQMRRIMLCVSDTIDKVVKMPGVSADDQRLLKKLKSDMLSTIEYAPVWIIMAVALALGIGTMIGWRRVATTIGEKIGKKGMTYAQGMSAQMTAAVSIGLASYTGMPVSTTHVLSSSVAGTMVVDGGGLQRKTVTSILMAWVFTLPAAVLLSGGLYWLSLQFL
5522121111000000000000000000000010001000000103102020000000001000000000100110131012321232221100000000000000000002111020010000000000000010111012001001012001000100011000100000000002211211332021211222233332444221101001000000000110031013000000000000000000112312121022022001101200221021033112233212133212220121202122002002201110122132234112211210120100002002202412202231131022022211221320010000000000000000002300110023002321120200001000000000011120110011000000000000222111120000000000000000000000001001211
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMLHLFAGLDLHTGLLLLLALAFVLFYEAINGFHDTANAVATVIYTRAMRSQLAVVMAAVFNFLGVLLGGLSVAYAIVHMLPTDLLLNMGSSHGLAMVFSMLLAAIIWNLGTWYFGLPASSSHTLIGAIIGIGLTNALMTGTSVVDALNIPKVLSIFGSLIVSPIVGLVFAGGLIFLLRRYWSGTKKRARIHLTPAEREKKDGKKKPPFWTRIALILSAIGVAFSHGANDGQKGIGLVMLVLIGVAPAGFVVNMNATGYEITRTRDAINNVEAYFEQHPALLKQATGADQLVPAPEAGATQPAEFHCHPSNTINALNRLKGMLTTDVESYDKLSLDQRSQMRRIMLCVSDTIDKVVKMPGVSADDQRLLKKLKSDMLSTIEYAPVWIIMAVALALGIGTMIGWRRVATTIGEKIGKKGMTYAQGMSAQMTAAVSIGLASYTGMPVSTTHVLSSSVAGTMVVDGGGLQRKTVTSILMAWVFTLPAAVLLSGGLYWLSLQFL
1SPARKS2xwub0.1320.9581.002threading_1SWQLLQPKVPEIQYFGASALHIKISRYWSDQYESLKAQLFTQITR--FASGSKIVLTRLCVALASLALSM-MPDAWPCAVADMVRLFQAPVDGQGRCLALLELLTVLPEEFQTSRLPQYRKGLVRTSLAVCGAVFPLLEQQPSSPSCVRQKVLKCFSSWVQLEVPLQDCEALIQAAFAALQDSELFDSSVEAIVNAISQPDAQRYVNTLLKLIPLVLGLQEQLRQGDMETSHGICRIAVALGEN-HSRALLDQVEHWQSFLALVNMIMFCTGISSLTLTFWYTLQ--DDILSFEAEKQAVYQQVY------RPVYFQLVDVLLHKAQFYGFWSSDEKEQFRIYRVDISDTLMYVYEMLG-AELLSNLYDKLGRLLTSYS------WQHTEALLYGFQSIAETSDVVPGLIGLI--PRISISNVQLADTVMFTIGALSEWLADPVMINSVLPLVLHALGNPELSVSSVSTLKKICRKYDLPPYAANIVAVSQDVLMKQIH
2PROSPECT21qgra0.0801.0002.039threading_2MLHTLGTETYRPSSASQCVAGIACAEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMLQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGDENDDDDDWNPCKAAGVCLMLLATCCLEGPEPSQRDTAAWTVGRICELLPEAAINDVYLAPLLQCLIEGASNVCWAFSSLAEAAYEAADVADDQEEPELIVQKLLETTDRPQKTTLVIMERLQQVLQMESHIQSTSDRIQFNDLQSLLCSDVVMASLLRMFSGGVQEDMAVSTLVEVLGGEKNYAEYQVCLAAVGLVGDLCRALQSNIIPFCDEVMNENVHRSVKPQILSVFGDIALAIGGEFKKYLEVVLNTLQQASQAQVDKSDYDMVDYLNELRESCLEAYTGIPRVEFILSFIDHIAG
3PPA-I1b3uA0.1100.9121.008threading_3FTTLVGGPEYVHCLLPPLESLAT------VEETVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLCSD------------DTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASD--EQDSVRLLAVEACVNIAQLL---PQEDLEALVMPTLRQAAED---KSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQ-----HVKSALASVIMGLSPILGKDNTIEHLLPL-------FLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAK----WRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLA--MSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAG
4PROSPECT21jdha0.0920.9202.034threading_4LTKLLNDEDQVVVNKAAVMVHQLSSRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLGLLAIFKSGGIPALVKML------GSPVDSVLFYAITTLHNLLAKMAVRLAGGLQKNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQ---RLVQNCLWTLRNLSDAATKQEGMEGLLGTLV--------QLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQ--------VGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQE--------AEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALC-------PANHAPLREQGAIPRLVQLLVRAHQDTQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIVATYAAAVLFRMS
5PROSPECT21b3ua0.1030.9762.014threading_5AAADGDDSLYPIAVLIRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLFTTLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYFRNLCSDDTPMVRRAAASKLGEFADNVKSEIIPMFSNLAAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAV--GPEITKTDLVPAFQNLMSHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVD------HVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCG--QDITTKHMLPTVLRMAGDPVANVRFNVAK--SLQKIGPILDNSTLQSEVKPILEKLT
6PROSPECT21w63A0.0930.9661.892threading_6MPAPILGYPAHFGQLECLRIGYLGAMLLLDERQDVHLLMTNCIKNHSTQFVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDVSIKRRAMELSFALVNGNNIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQ-------PLVQVAAWCIG----------EYGDLLVSGQCEEEEPIQVTEDEVLDILESVLISNMSTSVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGRAVEYNALFKKYDHMRSALLE
7PROSPECT22bkuB0.0761.0001.888threading_7MLKKLSNDNFLQFAGLSSQVLILAALTLKNELVVKTQQFAQRWITQVSPEAKNQIKTNALTALAAQLIAAIADIELPHGAWPENTGAEQPENVKRASLLALGYMCILIAIVQGAQSTETSKAVRLAALNALAVVCEATQAEDIEVQAAAFGCLCKIMSKYYTFMKPYMEQALYALTIATFWSTICEEEIDIAYELAQFPQSPLQSYNFALSSIKDVVPNLLNLLTRQNEVSMSAGACLQLFAQNCGNHILMDGPDKVQRTYYVHQALPSILNLMNDQSLQVDSVAESIDPQQHLPGVVQACLIGLQDHPKVATNCSWTIINLVEQLAEATPSPIYNFYPAFNARASAFSALTTMVEYATISTFVMDKLGQTMSVDENQLTLAQSLQELQSNILTVLAAVIRKDMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFNARRELKPAVLSVFGDIASNNGTLEALDYQIKVLEAVLDAYVGIVYVGTIFQFIAQVAL
8MUSTER1b3uA0.1090.9580.829threading_8SIKKLSTIALALGVERTRSELLPFLTDTIYDLLALAEQLGTFTTLVGGPEYVHCLLPPLESLATV----TVVRDKAVESLRAHEHSPSDLEAHFVPLVKRLAGFTSRTSACGLFSVCYQYFRNLCSPMVRRAAASKLGEFAKVLEL-VKSEIIPMFSNLASDDSVRLLAVEACVNIAQLL-PQEDLEALV--MPTLRQAAEDK---SWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKAEVRAAASHKCRENVIMSQILPCIKELVSDNQHVKSALASVIMGLSPILGKDNTIEHLLPL-DECPEVRLNIISNLDCVNEVIGILPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAI-AATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPN------YLHRMTTLFCINVLSEVCGQDITTKHMLPTVL--MAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQ
9SPARKS2x1gf0.1010.9560.871threading_9WQLMQLGKSQEVQFFGAITLHSKLMKHWHENREELKQKILESIVRAGGPKIVLNRLCISLGAYIVHMLGEEVINTFQNQRSQVIHTSVKRVVLRAEIVQLVIHTVERYLKLQMNRVWDAEAYSNMNRAVKCVGTWIKNIGYTIEGCVTITAVLLEVVHKCYWPCIHGCMTADENELAESCLK---TMVNIIIQPDCHNYPK--TAFVLIKMFLDSLSEITKTEWKRENDNEDIIVHIYMLFVSSVER--------HSTLLLSGITADPELSILVHRIVQEILHCTDKPGIYPVEESCSTMALAFWYMWEYIKPLYAHLTRILVRKSKSLAKWSSDDLECFRCYRQDISDTFMYCYDVLN-DYILEILAAMLDEAIADLQRHPTHW-TKLEACIYSFQS-VAEHRQIPRLMRVLAEIPYEKLNVKLLGTALETMGSYCNWLMYIPPAINLLVRGL----NSSMSAQATLGLKELCRD--CQLQLKPYADPLLNACHASLN
10PROSPECT23a6pA10.0670.8981.882threading_10------AMDQVNALCEQLVKAVTVMMKFCEEFKEKCPICVPCGLEKTQVAIVRHFGLQILE---------HVVKFRWNGMSRLE--------------KVYLKNSVMELIANGTLNILEEENHIKDALSRIVVEMIKREWPQHWPDM----LIELDTLSKQGETQTELVMFILLRLAEDVVTFQTLPPQRRRDIQQTLTQNMERIFSFLLNTLQENVNKYQQVKTDTSQESKAQANCRVGVAALNTLAGYIDWVSMSHITAENCKLLEILCLLLNEQELQLGAAECLLIAVSRKGKLEDRKPLMVLFGDVAMHYILSAAQT-----ADGGGLVEKHYVFLKRLCQVLCALGNQL-------------CALLGADSDVETPSNFGKYLESFLAFTTHPSQFLRSSTQMTWGALFRHEILSRDPLLLAIIPKYLRASMTNLVKMGFPSKTDSPSCEYSRFDFDSDEDFNAFFNSSRAQQGEVMRLACRLKTSFQMAGEWLF

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.591 to 2q6hA
SCOP code=f.54.1.1
TM-score=0.576 to 1m8xA
SCOP code=a.118.1.8
TM-score=0.640 to 1qgkA
SCOP code=a.118.1.1
TM-score=0.775 to 1b3uA
SCOP code=a.118.1.2
TM-score=0.844 to 1b3uA
SCOP code=a.118.1.2